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Name : opuBB (DIP0095) Accession : NP_938492.1 Strain : Corynebacterium diphtheriae NCTC13129 Genome accession: NC_002935 Putative virulence/resistance : Unknown Product : choline transport system permease Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1174 EC number : - Position : 78414 - 79088 bp Length : 675 bp Strand : - Note : Similar to Bacillus subtilis choline transport system permease OpuBB or ProW SW:OPBB_BACSU (Q45461) (217 aa) fasta scores: E(): 3e-14, 30.72% id in 192 aa, and to Mycobacterium tuberculosis transport system permease Rv3756c or MTV025.104c TR:O69722 (EMBL: DNA sequence : ATGACTTGGTTTGGTGATCTCCTCTCCTATCTCACCACTGCCGCGCACTGGTGGGGCTCGCAAGGCTTTCTTGCCCGTCT TCTAGAACACGTTGGAATCAGCCTGGCTGCGGTCGCCATTGCCGCACTGCTCGCCCTTCCGGCCGGTGTTCTGATCGGCC ATACTGGCCGCGGCGCCGGCCTTGTTGGTGGTGTCAGCGGTGCTGCCCGCGCGCTGCCAACCTTGGGCTTGCTCACGATC TTTGGGCTGGCTTTTGGCATTGGACTTACGGCACCGATGCTGGCGCTGATTATTTTGGCGATCCCATCACTGCTGGCTGG TGCTTATTCCGGCGTGGCCGCCGTAGATCGCGCGACCATCGACGCCGCCTACGCCATGGGTTTTACCCACCGCCAAGTAA TCAGTTCCATTGAGCTACCACTATCTGCAGCCGTGCTGGTGGGTGGCATTCGCGCCGCAGTGTTGCAGGTGACCGCTACG GCCACACTTGCTGCATATACCGCAGATGTGGGGTTGGGCCGATTTATTTTCCACGGCCTCAAAACGAGGGATTACATCGA GATGTTGGCGGCCTCCGTGCTGGTGATCGCACTCGCGTTGCTTTTCGACGCCCTACTCGGGGGCGCGCAAAAACTGATCT CTCAACGCACCCGCACCGCTACGCCTGCTCCTTAA Protein sequence : MTWFGDLLSYLTTAAHWWGSQGFLARLLEHVGISLAAVAIAALLALPAGVLIGHTGRGAGLVGGVSGAARALPTLGLLTI FGLAFGIGLTAPMLALIILAIPSLLAGAYSGVAAVDRATIDAAYAMGFTHRQVISSIELPLSAAVLVGGIRAAVLQVTAT ATLAAYTADVGLGRFIFHGLKTRDYIEMLAASVLVIALALLFDALLGGAQKLISQRTRTATPAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBB | NP_938492.1 | choline transport system permease | Not tested | Not named | Protein | 2e-45 | 100 |
| opuBB | YP_005124361.1 | choline transport system permease protein | Not tested | Not named | Protein | 6e-45 | 99 |
