Gene Information

Name : pipC (SBG_0938)
Accession : YP_004729821.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Virulence
Product : cell invasion protein chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1045246 - 1045587 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence :
ATGGGAAATTTATTATATCGTTTATATGACGCGTTAGGTCTGGATGTACCCGAAGAGGAACCACTTCTCATCATTGATGA
TGAGATACAGGTTTATTTTAATGAAACCGATGGGCTGCTGGAAATGTGCTGCCCTTTTATGCCATTACCCGACGATATAC
TCACATTGCAGCATTTTTTACGCCTGAATTACTCCAGCCCTGTGACTATTGGCGTTGATGCAGACAATACCGTTTTAGTG
GCACTGTATCGCTTACCACAATCCAGTACCGAAGAAGAGGCGCTTACCGGGTTTGAGTTACTCATTTCAAACGTGAAACA
GTTTAAAGAATACTATACTTAG

Protein sequence :
MGNLLYRLYDALGLDVPEEEPLLIIDDEIQVYFNETDGLLEMCCPFMPLPDDILTLQHFLRLNYSSPVTIGVDADNTVLV
ALYRLPQSSTEEEALTGFELLISNVKQFKEYYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipC YP_216029.1 hypothetical protein Virulence SPI-5 Protein 6e-34 85
pipC NP_460063.1 pathogenicity island-encoded protein C Virulence SPI-5 Protein 6e-34 85
pipC AAC33724.1 PipC Virulence SPI-5 Protein 9e-34 84
sigE NP_455587.1 cell invasion protein Virulence SPI-5 Protein 2e-33 84
sigE AAS66828.1 SigE Not tested SSR-1 Protein 7e-16 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pipC YP_004729821.1 cell invasion protein chaperone VFG0591 Protein 2e-34 85