Gene Information

Name : pipC (SEN0954)
Accession : YP_002243084.1
Strain : Salmonella enterica P125109
Genome accession: NC_011294
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1055721 - 1056062 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAGTCTATTAAATCGTTTATATGACGCGTTAGGCCTGGATGCGCCAGAAGATGAGCCACTGCTTATCATTGATGA
TGGGATACAGGTTTATTTTAATGAATCCGATCATACACTGGAAATGTGCTGTCCCTTTATGCCATTGCCTGACGACATCC
TGACTTTGCAGCATTTTTTACGTCTGAACTACACCAGCGCCGTCACTATCGGCGCTGACGCAGACAATACTGCTTTAGTG
GCGCTTTATCGCTTGCCACAAACCAGTACCGAAGAAGAGGCGCTCACTGGTTTTGAATTATTCATTTCAAACGTGAAGCA
ATTGAAAGAGCATTATGCATAA

Protein sequence :
MESLLNRLYDALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCCPFMPLPDDILTLQHFLRLNYTSAVTIGADADNTALV
ALYRLPQTSTEEEALTGFELFISNVKQLKEHYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipC NP_460063.1 pathogenicity island-encoded protein C Virulence SPI-5 Protein 2e-47 100
pipC YP_216029.1 hypothetical protein Virulence SPI-5 Protein 2e-47 100
pipC AAC33724.1 PipC Virulence SPI-5 Protein 3e-47 99
sigE NP_455587.1 cell invasion protein Virulence SPI-5 Protein 7e-47 99
sigE AAS66828.1 SigE Not tested SSR-1 Protein 2e-20 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pipC YP_002243084.1 cell invasion protein VFG0591 Protein 5e-48 100