Gene Information

Name : hpcC (SBG_0948)
Accession : YP_004729831.1
Strain : Salmonella bongori NCTC 12419
Genome accession: NC_015761
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1056640 - 1058106 bp
Length : 1467 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAAATAAATCATTGGATTAACGGAAAAAACGTTGGCAGTAGCGACTATTTCCAGACGACCAACCCGGCGACCGG
TGAAGTACTGGCGGACGTGGCCTCTGGCGGCGAAGCAGAAGTGAATCAGGCGGTGGCGGCGGCAAAAGCGGCGTTCCCGA
AATGGGCCAATCTGCCGATGAAAGAGCGTGCCCGTCTGATGCGCCGCCTCGGCGAGTTGATTGACCAGAACGTGCCGGAA
ATCGCGGCGATGGAAACCGCCGACACCGGTCTGCCTGTTCATCAGACCAAAAACGTACTCATCCCACGCGCGTCGCACAA
TTTCGAGTTTTTTGCTGAAGTGTGCCAGCAGATGAATGGCAAGACTTATCCGGTTGACGACAAGATGCTCAACTACACGT
TGGTGCAGCCGGTTGGCGTATGTGCGCTGATCTCGCCGTGGAACGTACCGTTTATGACGGCGACCTGGAAGGTTGCGCCA
TGTCTGGCGCTGGGCAATACCGCGGTGCTGAAGATGTCCGAGTTGTCGCCGCTTACCGCCGATCGTCTGGGCGAGCTGGC
GCTGGAAGCAGGCATTCCGCCAGGGGTGCTTAACGTGGTGCAGGGCTACGGCGGGACGGCGGGAGACGCGCTGGTGCGCC
ATCACGATGTGCGTGCCATCTCTTTTACTGGCGGCACCGCTACCGGGCGTAACATTATGAAAAATGCGGGCCTGAAAAAG
TACTCAATGGAGCTGGGCGGTAAATCCCCGGTGCTGATTTTTGACGACGCCGATATAGAACGGGCGCTGGACGCTGCGCT
GTTTACCATTTTTTCGATCAACGGTGAACGCTGCACCGCCGGTTCGCGCATTTTCATTCAGCAGAGCATCTACCCTGAGT
TTGTGAAACGCTTTGCCGAGCGTGCCAGTCGTCTGCGCGTGGGCGATCCGACTGATCCGAACACGCAAGTCGGCGCGCTA
ATTAGCAAGTCTCACTGGGAAAAAGTTTCTGGCTATATTCGCCTCGGTATTGAAGAAGGGGCAACTCTGCTGGCGGGCGG
TGCGGAAAAACCCACCGACTTGCCTGCACATCTGCGCGGTGGCAATTTTCTGCGTCCGACGGTACTGGCGGACGTCGACA
ACCGGATGCGTGTGGCCCAGGAAGAGATTTTTGGCCCGGTGGCCTGCTTGCTGCCGTTTAAAGACGAAGCGGAAGGGCTG
CGCCTGGCCAATGATGTTGAATACGGTCTCGCCTCTTATCTCTGGACGCAAGATGTCAGTAAAGTACTGCGCCTGGCACG
CGGTATTGAAGCCGGGATGGTGTTCGTCAATACCCAGAATGTCCGCGACCTGCGCCAGCCGTTCGGCGGCGTGAAAGCCT
CCGGCACGGGACGCGAAGGCGGCGAATATAGCTTTGAGGTGTTTGCGGAAATGAAAAATGTCTGCATCTCAATGGGCGAC
CATCCTATCCCAAAATGGGGAGTCTGA

Protein sequence :
MKKINHWINGKNVGSSDYFQTTNPATGEVLADVASGGEAEVNQAVAAAKAAFPKWANLPMKERARLMRRLGELIDQNVPE
IAAMETADTGLPVHQTKNVLIPRASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALISPWNVPFMTATWKVAP
CLALGNTAVLKMSELSPLTADRLGELALEAGIPPGVLNVVQGYGGTAGDALVRHHDVRAISFTGGTATGRNIMKNAGLKK
YSMELGGKSPVLIFDDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAERASRLRVGDPTDPNTQVGAL
ISKSHWEKVSGYIRLGIEEGATLLAGGAEKPTDLPAHLRGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGL
RLANDVEYGLASYLWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD
HPIPKWGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 0.0 91
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-68 43