Gene Information

Name : CMM_0084 (CMM_0084)
Accession : YP_001220823.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : putative sugar ABC transporter permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0395
EC number : -
Position : 124978 - 125889 bp
Length : 912 bp
Strand : -
Note : putative sugar ABC transporter, permease component (ZP_00225485.1| COG0395: ABC-type sugar transport system,permease component [Kineococcus radiotolerans SRS30216]; AAF37729.1| cellobiose transport permease BglB [Thermobifida fusca]). InterPro: Binding-pr

DNA sequence :
ATGACCGCCCCCTCCGTCCCCTACATCCGCCAGACAGCCGGTCCCGGCGCTGCGAGATCCGCCTCCAAGAGGCGCGACAA
GGGCGCCACCGGGGACAAGCCGAAGTGGGTCACCTACGCGGTCCTCGGTGCTGTCATCCTCATCTCGGTGCTGCCCCTCT
ACTACACCTTCCTTCTCGCCTCGAACACTTCAGCCGAGGTCGCGCAGAATCCCATCCCCTCCGTCATCCCAGGTGGAGAA
CTCGTCAACAACCTCACTAGGCTCTTCCAGTCCGACATCGACTTGATGAAGGCGGCGTGGAACTCGTTCTTCGTCTCCGC
CGTCACCGCGGTGGCCGTCGTCTTCTTCTCCACCCTCGCCGGTTTCGCCTTCGCGAAGCTCCGCTTCCGTGGCCAGGTTC
CTCTGCTTGCGATCGTGGTGGCGACCCTTGCCGTCCCCACTCAGCTCGGCGTCGTCCCGCTGTACATCGTGATGCGCGAA
CTGGGACTCGTCGGCAACCTCTGGGCGGTCATCCTGCCCGGGATCGTCACCGCGTTCGGAGTCTTCTGGATGACGCAGTA
CCTGTCGGCGGCGCTGCCCTTCGAGCTGATCGAAGCGGCTCGCATCGACGGCGCGTCCACCTTCCGCACGTTCTGGTCGA
TCGCGCTCCCCGCTGTCCGTCCTGCCGCGTCGATGCTGGGGCTGTTCAGCTTCATCGGCGCGTGGACGAACTACTTCTGG
CCTGCCATCGTCCTCGGACCGCAGAACCCCACCCTGCCGGTCGCGCTCCAGCTGCTGCAGACCGGGTTCTTCAAGGACAT
CCCGTTGATCATGACGGGCGTCCTCGTGTCGATCGTGCCGCTGCTGGTCCTCTTCCTCATCCTCGGCAAGCAGCTCGTCG
CCGGCGTGATGCAAGGCGCGATCAAGGGCTGA

Protein sequence :
MTAPSVPYIRQTAGPGAARSASKRRDKGATGDKPKWVTYAVLGAVILISVLPLYYTFLLASNTSAEVAQNPIPSVIPGGE
LVNNLTRLFQSDIDLMKAAWNSFFVSAVTAVAVVFFSTLAGFAFAKLRFRGQVPLLAIVVATLAVPTQLGVVPLYIVMRE
LGLVGNLWAVILPGIVTAFGVFWMTQYLSAALPFELIEAARIDGASTFRTFWSIALPAVRPAASMLGLFSFIGAWTNYFW
PAIVLGPQNPTLPVALQLLQTGFFKDIPLIMTGVLVSIVPLLVLFLILGKQLVAGVMQGAIKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0084 YP_001220823.1 putative sugar ABC transporter permease Not tested chp/tomA region Protein 1e-125 100