PAI Gene Information


Name : unnamed
Accession : AAC04852.1
PAI name : Hrp PAI
PAI accession : U97504
Strain : Erwinia amylovora ATCC 49946
Virulence or Resistance: Not determined
Product : lysR homolog
Function : -
Note : partial ORF
Homologs in the searched genomes :   6 hits    ( 6 protein-level )  
Publication :
    -Bogdanove,A.J., Kim,J.F., Wei,Z., Kolchinsky,P., Charkowski,A.O., Conlin,A.K., Collmer,A. and Beer,S.V., "Homology and functional similarity of an hrp-linked pathogenicity locus, dspEF, of Erwinia amylovora and the avirulence locus avrE of Pseudomonas syringae pathovar tomato", Proc. Natl. Acad. Sci. U.S.A. 95 (3), 1325-1330 (1998) PUBMED 9448330.

    -Bogdanove,A.J., Kim,J.F., Wei,Z.-M., Kolchinsky,P. and Beer,S.V., "Direct Submission", Submitted (07-APR-1997) Plant Pathology, Cornell University, 334 Plant Science Bldg., Ithaca, NY 14853, USA.


DNA sequence :
ATGTTTATATCTAAATCGATGCAGGTTTTTATCACTCTGTATCAGGAAAAAAGTCTGAAAACTGCGGCTGATAAGCTATG
TTTGACGGTACCTCCCGTCTCACGAATGTTAAAACTCACTGAAGGTTGGGTGGGTGAGCAACTCTTCATTATTGAACGAA
ATAATATAACTCCGACCCCGGCAGCGGATTGTATCTATCAGCAGCTTTTACCGCTTTACATGGCGCTGAAAAATATGACA
AGAAAACATCCGGAGCAGCAAGAGTTTTTGATTGCTTCTCCCTATATATCAACGTCAATATTATCAGATTTGTTGACCAT
AAGTGAAAGTGCACTGCCGAAATGCTCATCGATAAAATATGCAGAGTGCATCCATCCCGATGACGATATATATATCAGTC
TGCAGCCTGTTGAATGTCCGATGCATTTTGAACCGATAAGAATGGACCTTGTTCTGGAACTTTGCTGTTCTAAAGATGTG
GGGGATAAGTGGTTACATATGCCAATTTTAGCTGAAAGTGAGACCAAGAAGCTAAAATACTTTCAGCGATCGCTCGCTGA
ACTTCATGCACGAGGGGGAAGCGGTGTACTGAGGCAGGTTGATAATCCATCCCATCTTCAGTCCACTTTTAAAAGTGGCG
AAGGACTGCTGTTTCGCCTTCCCCCAAAGAATAATATGGTAAAAGATTACCAGTCTCTTCCTGTTATTTCTCACTGCCCT
CTGTTTATTTATGTCAACACATTAAAAAAGGATAAAAGACATAATTGCTTTACTGCTAAGCTT

Protein sequence :
MFISKSMQVFITLYQEKSLKTAADKLCLTVPPVSRMLKLTEGWVGEQLFIIERNNITPTPAADCIYQQLLPLYMALKNMT
RKHPEQQEFLIASPYISTSILSDLLTISESALPKCSSIKYAECIHPDDDIYISLQPVECPMHFEPIRMDLVLELCCSKDV
GDKWLHMPILAESETKKLKYFQRSLAELHARGGSGVLRQVDNPSHLQSTFKSGEGLLFRLPPKNNMVKDYQSLPVISHCP
LFIYVNTLKKDKRHNCFTAKL