PAI Gene Information


Name : unnamed
Accession : AAD24685.1
PAI name : Hrp PAI
PAI accession : AF083877
Strain : Erwinia amylovora ATCC 49946
Virulence or Resistance: Not determined
Product : unknown
Function : -
Note : orfU1; similar to HP1401 and HP0806 of Helicobacter pyroli; protein may be defective, possible frame shift would make orfU2 in frame
Homologs in the searched genomes :   37 hits    ( 36 protein-level,   1 DNA-level )  
Publication :
    -Kim,J.F., Wei,Z., Sneath,B.J. and Beer,S.V., "Direct Submission", Submitted (12-AUG-1998) Plant Pathology, Cornell University, 334 Plant Science Bldg., Ithaca, NY 14853, USA.

    -Sneath,B.J., Howson,J.M. and Beer,S.V., "A pathogenicity gene from Erwinia amylovora encodes a predicted protein product homologous to a family of procaryotic response regulators", Phytopathology 80, 1038 (1990).

    -Wei,Z., Kim,J.F. and Beer,S.V., "Identification of a two-component system that functions in the type III protein secretion system of Erwinia amylovora", Unpublished.


DNA sequence :
ATGCCATGCCTACTGCGATCCCGCCCCGGGTATTTTATCTATGGAGATGAGCGCATCAGCTTTGATCGTCAGCCTCGTAG
CGGGGCAACAAACCGCGTGTTGATTAAAGTCCATCCTGATTGCCGGGTAGTTGTCTTTGCTCCTGAAGAGGCTGATGACC
AGAGCGTGCTGGGCGCGGTGAAAAAGCGCGGGCGCTGGATCTGGCAGCAGCTACGGGAGTTCCGTAATCAGCGTGAATAT
ATCACCCCGCGCCAGTATATCAGCGGCGAAAGCCACTACTATCTGGGCAAACAATATTTGCTTAAAGTGCTGGCAGAACC
CGGGCAAATCCAGCGGGTAAAAATGCTGCGCGGCAGGCTGGATGTGACCGTCCGACAAAAAGAGCCTGAAAACGTCAGGC
AGCTACTCTCTGACTGGTACAGATCGCGTGCCAGAGACGTTTTCCGCAGAAGGCTGGAGGCCATGCTGGAGCAGGCCCTG
TGGGTGGATGTTCCCCCGCCGCTGCATATTCTCACCATGCAAACTCAGTGGGGGAGCTGTTCTCCCGCTGGCAGACTCAC
GCTCAACCCCAACCTGGTGAAGGCGCACCGGGATGCATCGACTATGTGA

Protein sequence :
MPCLLRSRPGYFIYGDERISFDRQPRSGATNRVLIKVHPDCRVVVFAPEEADDQSVLGAVKKRGRWIWQQLREFRNQREY
ITPRQYISGESHYYLGKQYLLKVLAEPGQIQRVKMLRGRLDVTVRQKEPENVRQLLSDWYRSRARDVFRRRLEAMLEQAL
WVDVPPPLHILTMQTQWGSCSPAGRLTLNPNLVKAHRDASTM