PAI Gene Information


Name : intB
Accession : AAD37509.1
PAI name : PAI IV 536
PAI accession : AF135406
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : P4-like integrase
Function : -
Note : similar to Yersinia pseudotuberculosis int gene in GenBank Accession Number AJ009592
Homologs in the searched genomes :   333 hits    ( 326 protein-level,   7 DNA-level )  
Publication :
    -Schubert,S., Rakin,A., Fischer,D., Sorsa,J. and Heesemann,J., "Characterization of the integration site of Yersinia high-pathogenicity island in Escherichia coli", FEMS Microbiol. Lett. 179 (2), 409-414 (1999) PUBMED 10518744.

    -Schubert,S., Rakin,A., Fischer,D., Sorsa,J. and Heesemann,J., "Direct Submission", Submitted (17-MAR-1999) Dept. of Bacteriology, Max von Pettenkofer-Institut, Pettenkoferstr. 9a, Munich 80336, Germany.


DNA sequence :
ATGCTGGCGCTGAATATCAACCCGGTACAGCAGCGGGCTGCTGAACGTGGCTCACGAACACCGGAGAAAGTTTTTAAAAA
CGTGGCGCTGGCGTGGCATAAAAGTAACAGGAAATGGTCGCAGAACACCGCCGACCGTCTGCGTGCCAGTCTGAACAATC
ACATCTTTCCGGTCATCGGGAACTTACCTGTATCAGAACTTAAACCCCGTCATTTCATTGACCTGCTGAAAGGGATCGAG
GAAAAAGGTCTGCTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGTAACATAATGCGCCATGCGGTCCATCAGGAGTT
AATCGATACGAACCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCCGCCGCTGG
AGCGGCTGCCTGAACTGCTTGAACGTATTGGGGCATATCATCAGGGCCGTGAACTGACCCGGCATGCCGTTCTGCTGATG
CTGCATGTGTTCATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGAT
ACCCGCGACGCGAGAACCCATTATTGGCGTGCGTTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCC
TCTCAGAACAGTCCATCGCCATTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCAT
AACCCGTATAAGCCAATGTGTGAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTG
CGGTCACGGCTTCCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGA
TGAGTCATCAGGAGCGCAATACCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTGGAAGCCCGCAAAGCGATGATG
CAGTGGTGGTCGGATTATCTGGAAGCATGCCGAGAATCTTATGCACCGCCTTATACAATTGGTAAAAATAAGTTTATCCC
ATAG

Protein sequence :
MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIGNLPVSELKPRHFIDLLKGIE
EKGLLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVLLM
LHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH
NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM
QWWSDYLEACRESYAPPYTIGKNKFIP