Name : unnamed
Accession : AAF71496.1
PAI name : Hrp PAI
PAI accession : AF232005
Strain : Pseudomonas syringae 1448A
Virulence or Resistance: Not determined
Product : unknown
Function : -
Note : ORF1; similar to Pseudomonas syringae phaseolicola AvrPphC and Pseudomonas syringae glycinea AvrC
Homologs in the searched genomes : 3 hits ( 3 protein-level )
Publication :
-Alfano,J.R. and Collmer,A., "Direct Submission", Submitted (07-FEB-2000) Dept. Biol. Sci., UNLV, 1854 Maryland Parkway, Las Vegas, NV 89154, USA.
-Alfano,J.R., Charkowski,A.O., Deng,W.L., Badel,J.L., Petnicki-Ocwieja,T., van Dijk,K. and Collmer,A., "The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in pl", Proc. Natl. Acad. Sci. U.S.A. 97 (9), 4856-4861 (2000) PUBMED 10781092.
| DNA sequence : |  |
ATGGGTTGCGTATCGTCAAAAGCATCTGTCATTTCTTCGGACAGCTTTCGCGCATCATATACAAACTCTCCAGAGGCATC
CTCAGTCCATCAACGAGCCAGGACGCCAAGGTGCGGTGAGCTTCAGGGGCCCCAAGTGAGCAGATTGATGCCTTACCAGC
AGGCGTTAGTAGGTGTGGCCCGATGGCCTAATCCGCATTTTAACAGGGACGATGCGCCCCACCAGATGGAGTATGGAGAA
TCGTTCTACCATAAAAGCCGAGAGCTTGGTGCGTCGGTCGCCAATGGAGAGATAGAAACGTTTCAGGAGCTCTGGAGTGA
AGCTCGTGATTGGAGAGCTTCCAGAGCAGGCCAAGATGCTCGGCTTTTTAGTTCATCGCGTGATCCCAACTCTTCACGGG
CGTTTGTTACGCCTATAACTGGACCATACGAATTTTTAAAAGATAGATTCGCAAACCGTAAAGATGGAGAAAAGCATAAG
ATGATGGATTTTCTCCCACACAGCAATACGTTTAGGTTTCATGGGAAAATTGACGGTGAGCGACTTCCTCTCACCTGGAT
CTCGATAAGTTCTGATCGTCGTGCCGACAGAACAAAGGATCCTTACCAAAGGTTGCGCGACCAAGGCATGAACGATGTGG
GTGAGCCTAATGTGATGTTGCACACCCAAGCCGAGTATGTGCCCAAAATTATGCAACATGTGGAGCATCTTTATAAGGCC
GCTACGGATGCTGCATTGTCCGATGCCAATGCGCTGAAAAAACTCGCAGAGATACATTGGTGGACGGTACAAGCTGTTCC
CGACTTTCGTGGAAGTGCAGCTAAGGCTGAGCTCTGCGTGCGCTCCATTGCCCAGGCAAGGGGCATGGACCTGCCGCCGA
TGAGACTCGGCATCGTGCCGGATCTGGAAGCGCTTACGATGCCTTTGAAAGACTTTGTGAAAAGTTACGAAGGGTTCTTC
GAACATAACTGA
|
| Protein sequence : | |
MGCVSSKASVISSDSFRASYTNSPEASSVHQRARTPRCGELQGPQVSRLMPYQQALVGVARWPNPHFNRDDAPHQMEYGE
SFYHKSRELGASVANGEIETFQELWSEARDWRASRAGQDARLFSSSRDPNSSRAFVTPITGPYEFLKDRFANRKDGEKHK
MMDFLPHSNTFRFHGKIDGERLPLTWISISSDRRADRTKDPYQRLRDQGMNDVGEPNVMLHTQAEYVPKIMQHVEHLYKA
ATDAALSDANALKKLAEIHWWTVQAVPDFRGSAAKAELCVRSIAQARGMDLPPMRLGIVPDLEALTMPLKDFVKSYEGFF
EHN
|
|
