PAI Gene Information


Name : cagA
Accession : AAG09888.1
PAI name : cag PAI
PAI accession : AF289439
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cytotoxin associated protein A
Function : -
Note : CagA
Homologs in the searched genomes :   No hits  
Publication :
    -Occhialini,A., Marais,A., Urdaci,M., Sierra,R., Munoz,N., Covacci,A. and Megraud,F., "Composition and gene expression of the cag pathogenicity island in Helicobacter pylori strains isolated from gastric carcinoma and gastritis patients in Costa Rica", Infect. Immun. 69 (3), 1902-1908 (2001) PUBMED 11179371.

    -Occhialini,A., Marais,A., Urdaci,M., Sierra,R., Munoz,N., Covacci,A. and Megraud,F., "Direct Submission", Submitted (26-JUL-2000) Laboratory of Bacteriology, University of Bordeaux 2, 146 rue Leo Saignat, Bordeaux 33076, France.


DNA sequence :
AACTTTTCGGACATCAAGAAAGAGTTGAATGCAAAACTTTTTGGAAATTTCAATAACAATAACAATAATGGGCTCAAAAA
CGAACCCATTTATGCTAAAGTTAATAAAAAGAAAACAGGACAAGTAGCTAGCCCTGAAGAACCCATTTATGCTCAAGTTG
CTAAAAAGGTAAATGCAAAAATTGACCGACTCAATCAAATAGCAAGTGGTTTGGGTGGTGTAGGGCAAGCAGCGGGCTTC
CCTTTGAAAAGGCATGATAAAGTTGATGATCTCAGTAAGGTAGGGCGATCAGTTAGCCCTGAACCCATTTATGCTACGAT
TGATGATCTCGGCGGACCTTTCCCTTTGAAAAGGCATGATAAAGTTGATGATCTCAGTAAGGTAGGGCTTTCAAGGGAGC
AAAAATTGGCTCAGAAAATTGACAATCTCAATCAAGCGGTATCAGAAGCTAAAGCAGGTTATTTTGGCAACCTAGAGCAA
ACGATAGACAAGCTCAAAGATTCTACAAAACACAATCCCATGAATCTATGGGTTGAAAGTGCAAAAAAAGTGCCTGCTAG
TTTGTCAGCG

Protein sequence :
NFSDIKKELNAKLFGNFNNNNNNGLKNEPIYAKVNKKKTGQVASPEEPIYAQVAKKVNAKIDRLNQIASGLGGVGQAAGF
PLKRHDKVDDLSKVGRSVSPEPIYATIDDLGGPFPLKRHDKVDDLSKVGLSREQKLAQKIDNLNQAVSEAKAGYFGNLEQ
TIDKLKDSTKHNPMNLWVESAKKVPASLSA