Name : tcdB1
Accession : AAL18487.1
PAI name : tcd island
PAI accession : AF346500
Strain : Photorhabdus luminescens TTO1
Virulence or Resistance: Virulence
Product : TcdB1
Function : -
Note : TcdB1 insecticidal toxin complex protein; TcdB
Homologs in the searched genomes : 39 hits ( 39 protein-level )
Publication :
-ffrench-Constant,R.H., Bowen,D.J. and Waterfield,N.R., "Direct Submission", Submitted (19-JAN-2001) Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK.
-Waterfield,N.R. and ffrench-Constant,R.H., "Direct Submission", Submitted (22-AUG-2002) Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK REMARK Sequence update by submitter.
-Waterfield,N.R., Bowen,D.J., Fetherston,J.D., Perry,R.D. and ffrench-Constant,R.H., "The tc genes of Photorhabdus: a growing family", Trends Microbiol. 9 (4), 185-191 (2001) PUBMED 11286884.
-Waterfield,N.R., Daborn,P.J. and ffrench-Constant,R.H., "Genomic islands in Photorhabdus", Trends Microbiol. 10 (12), 541-545 (2002) PUBMED 12564983.
| DNA sequence : | |
ATGCAGAATTCACAAACATTCAGTGTTACCGAGCTGTCATTACCCAAAGGCGGCGGCGCTATTACCGGTATGGGTGAAGC
ATTAACACCAGCCGGGCCGGATGGTATGGCCGCCTTATCCCTGCCATTACCCATTTCCGCCGGGCGTGGTTACGCACCCT
CGCTCACTCTGAATTACAACAGTGGAACCGGTAACAGCCCATTTGGTCTCGGTTGGGACTGCGGCGTCATGGCAATTCGT
CGTCGCACCAGTACCGGCGTACCGAATTACGATGAAACCGATACTTTTCTGGGGCCGGAAGGTGAAGTGTTGGTCGTAGC
ATTAAATGAGGCAGGTCAAGCTGATATCCGCAGTGAATCCTCATTGCAGGGCATCAATTTGGGTGCGACCTTCACCGTTA
CCTGTTATCGCTCCCGCCTAGAAAGCCACTTTAACCGGTTGGAATACTGGCAACCCCAAACAACCGGCGCAACCGATTTC
TGGCTGATATACAGCCCCGACGGACAGGTCCATTTACTGGGCAAAAATCCTCAGGCACGTATCAGCAATCCACTCAATGT
TAACCAAACAGCGCAATGGCTGTTGGAAGCCTCGATATCATCCCACAGCGAACAGATTTATTATCAATATCGCGCTGAAG
ATGAAGCAGGTTGTGAAACCGACGAGCTAGCAGCCCACCCCAGCGCAACCGTTCAGCGCTACCTGCAAACAGTACATTAC
GGGAACCTGACCGCCAGCGACGTTTTTCCTACACTAAACGGAGATGACCCACTTAAATCTGGCTGGATGTTCTGTTTAGT
ATTTGACTACGGTGAGCGCAAAAACAGCTTATCTGAAATGCCGCTGTTTAAAGCCACAGGCAATTGGCTTTGCCGAAAAG
ACCGTTTTTCCCGTTATGAGTACGGTTTTGAATTGCGTACTCGCCGCTTATGCCGCCAAATACTGATGTTTCACCGTCTA
CAAACCCTATCTGGTCAGGCAAAGGGGGATGATGAACCTGCGCTAGTGTCGCGTCTGATACTGGATTATGACGAAAACGC
GATGGTCAGTACGCTCGTTTCTGTCCGCCGGGTAGGCCATGAGGACAACAACACGGTTACCGCGCTGCCACCACTGGAAC
TGGCCTATCAGCCTTTTGAGCCAGAACAAACCGCACTCTGGCAATCAATGGATGTACTGGCAAATTTCAACACCATTCAG
CGCTGGCAACTGCTTGACCTGAAAGGAGAAGGCGTGCCCGGCATTCTCTATCAGGATAGAAATGGCTGGTGGTATCGATC
TGCCCAACGTCAGGCCGGGGAAGAGATGAATGCGGTCACCTGGGGGAAAATGCAACTCCTTCCCATCACACCAGCTGTGC
AGGATAACGCCTCACTGATGGATATTAACGGTGACGGGCAACTGGACTGGGTGATTACCGGGCCGGGGCTAAGGGGCTAT
CACAGCCAACACCCGGATGGCAGTTGGACGCGTTTTACGCCATTACATGCCCTGCCGATAGAATATTCTCATCCTCGCGC
TCAACTTGCCGATTTAATGGGAGCCGGGCTGTCCGATTTAGTGCTAATTGGTCCCAAAAGTGTGCGCTTATATGTCAATA
ACCGTGATGGTTTTACCGAAGGGCGGGATGTGGTGCAATCCGGTGATATCACCCTGCCGCTACCGGGCGCCGATGCCCGT
AAGTTAGTGGCATTTAGTGACGTACTGGGTTCAGGCCAAGCACATCTGGTTGAAGTTAGTGCAACTCAAGTCACCTGCTG
GCCGAATCTGGGGCATGGCCGTTTTGGTCAGCCAATCGTATTGCCGGGATTCAGCCAATCTGCCGCCAGTTTTAATCCTG
ATCGAGTTCATCTGGCCGATTTGGATGGGAGCGGCCCTGCCGATTTGATTTATGTTCATGCTGACCGTCTGGATATTTTC
AGCAATGAAAGTGGCAACGGTTTTGCAAAACCATTCACACTCTCTTTTCCTGACGGCCTGCGTTTTGATGATACCTGCCA
GTTGCAAGTAGCCGATGTACAAGGGTTAGGCGTTGTCAGCCTGATCCTAAGCGTACCGCATATGGCGCCACATCATTGGC
GCTGCGATCTGACCAACGCGAAACCGTGGTTACTCAGTGAAACGAACAACAATATGGGGGCCAATCACACCTTGCATTAC
CGTAGCTCTGTCCAGTTCTGGCTGGATGAAAAAGCTGCGGCATTGGCTACCGGACAAACACCGGTCTGTTACCTGCCCTT
CCCGGTCCATACCCTTTGGCAAACAGAAACCGAGGATGAAATCAGCGGCAATAAGTTAGTGACCACGTTACGTTATGCTC
ACGGCGCTTGGGATGGACGTGAACGGGAATTTCGTGGCTTTGGTTATGTTGAGCAGACAGACAGCCATCAACTCGCTCAA
GGCAATGCGCCGGAACGTACACCACCGGCACTCACCAAAAGCTGGTATGCCACCGGATTACCTGCGGTAGATAATGCGTT
ATCCGCCGGGTATTGGCGTGGCGATAAGCAAGCTTTCGCCGGTTTTACGCCACGTTTTACTCTCTGGAAAGAGGGCAAAG
ATGTTCCACTGACACCGGAAGATGACCATAATCTATACTGGTTAAACCGGGCGCTAAAAGGTCAGCCACTGCGTAGTGAA
CTCTACGGGCTGGATGGCAGCGCACAGCAACAGATCCCCTATACAGTGACTGAATCCCGTCCACAGGTGCGCCAATTACA
AGATGGCGCCACCGTTTCCCCGGTGCTCTGGGCCTCAGTCGTGGAAAGCCGTAGTTATCACTACGAACGTATTATCAGTG
ATCCCCAGTGCAATCAGGATATCACGTTGTCCAGTGACCTATTCGGGCAACCACTGAAACAGGTTTCCGTACAATATCCC
CGCCGCAACAAACCAACAACCAATCCGTATCCCGATACCCTACCGGATACGCTGTTTGCCAGCAGTTATGACGATCAACA
ACAGCTATTGCGATTAACCTGCCGACAATCCAGTTGGCACCATCTTATTGGTAATGAGCTAAGAGTGTTGGGATTACCGG
ATGGCACACGCAGTGATGCCTTTACTTACGATGCCAAACAGGTACCTGTCGATGGCTTAAATCTGGAAACCCTGTGTGCT
GAAAATAGCCTGATTGCCGATGATAAACCTCGCGAATACCTCAATCAGCAACGAACGTTCTATACCGACGGGAAAAACCA
AACACCGCTGAAAACACCGACACGACAAGCGTTAATCGCCTTTACCGAAACGGCGGTATTAACGGAATCTCTGTTATCCG
CGTTTGATGGCGGTATTACGCCAGACGAATTACCGGGAATACTGACACAGGCCGGATACCAACAAGAGCCTTATCTGTTT
CCACGCACCGGCGAAAACAAAGTTTGGGTAGCGCGTCAAGGCTATACCGATTACGGGACGGAAGCACAATTTTGGCGTCC
TGTCGCACAACGTAACAGCCTGTTAACCGGGAAAATGACGTTAAAATGGGATACTCACTATTGTGTCATCACCCAAACCC
AAGATGCTGCCGGCCTCACCGTCTCAGCCAATTATGACTGGCGTTTTCTCACACCAACGCAACTGACTGACATCAACGAT
AATGTGCATCTCATCACCTTGGATGCTCTGGGACGCCCTGTCACGCAACGTTTCTGGGGGATCGAAAGCGGTGTGGCAAC
AGGTTACTCTTCATCAGAAGAAAAACCATTCTCTCCACCAAACGATATCGATACCGCTATTAATCTAACCGGACCACTCC
CTGTCGCACAGTGTCTGGTCTATGCACCGGACAGTTGGATGCCACTATTCAGTCAAGAAACCTTCAACACATTAACGCAG
GAAGAGCAGGAGACGCTGCGTGATTCACGTATTATCACGGAAGATTGGCGTATTTGCGCACTGACTCGCCGCCGTTGGCT
ACAAAGTCAAAAGATCAGTACACCATTAGTTAAACTGTTAACCAACAGCATTGGTTTACCTCCCCATAACCTTACGCTGA
CCACAGACCGTTATGACCGCGACTCTGAGCAGCAAATTCGCCAACAAGTCGCATTTAGTGATGGTTTTGGCCGTCTGCTA
CAAGCGTCTGTACGACATGAGGCAGGCGAAGCCTGGCAACGTAACCAAGACGGTTCTCTGGTGACAAAAGTGGAGAATAC
CAAAACGCGTTGGGCGGTCACGGGACGCACCGAATATGATAATAAAGGGCAAACGATACGCACTTATCAGCCCTATTTCC
TCAACGACTGGCGATATGTCAGTGATGACAGCGCCAGAAAAGAAGCCTATGCGGATACTCATATTTATGATCCAATTGGG
CGAGAAATCCGGGTTATTACTGCAAAAGGCTGGCTGCGCCAAAGCCAATATTTCCCGTGGTTTACCGTGAGTGAGGATGA
GAATGATACGGCCGCTGATGCGCTGGTGTAA
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| Protein sequence : | |
MQNSQTFSVTELSLPKGGGAITGMGEALTPAGPDGMAALSLPLPISAGRGYAPSLTLNYNSGTGNSPFGLGWDCGVMAIR
RRTSTGVPNYDETDTFLGPEGEVLVVALNEAGQADIRSESSLQGINLGATFTVTCYRSRLESHFNRLEYWQPQTTGATDF
WLIYSPDGQVHLLGKNPQARISNPLNVNQTAQWLLEASISSHSEQIYYQYRAEDEAGCETDELAAHPSATVQRYLQTVHY
GNLTASDVFPTLNGDDPLKSGWMFCLVFDYGERKNSLSEMPLFKATGNWLCRKDRFSRYEYGFELRTRRLCRQILMFHRL
QTLSGQAKGDDEPALVSRLILDYDENAMVSTLVSVRRVGHEDNNTVTALPPLELAYQPFEPEQTALWQSMDVLANFNTIQ
RWQLLDLKGEGVPGILYQDRNGWWYRSAQRQAGEEMNAVTWGKMQLLPITPAVQDNASLMDINGDGQLDWVITGPGLRGY
HSQHPDGSWTRFTPLHALPIEYSHPRAQLADLMGAGLSDLVLIGPKSVRLYVNNRDGFTEGRDVVQSGDITLPLPGADAR
KLVAFSDVLGSGQAHLVEVSATQVTCWPNLGHGRFGQPIVLPGFSQSAASFNPDRVHLADLDGSGPADLIYVHADRLDIF
SNESGNGFAKPFTLSFPDGLRFDDTCQLQVADVQGLGVVSLILSVPHMAPHHWRCDLTNAKPWLLSETNNNMGANHTLHY
RSSVQFWLDEKAAALATGQTPVCYLPFPVHTLWQTETEDEISGNKLVTTLRYAHGAWDGREREFRGFGYVEQTDSHQLAQ
GNAPERTPPALTKSWYATGLPAVDNALSAGYWRGDKQAFAGFTPRFTLWKEGKDVPLTPEDDHNLYWLNRALKGQPLRSE
LYGLDGSAQQQIPYTVTESRPQVRQLQDGATVSPVLWASVVESRSYHYERIISDPQCNQDITLSSDLFGQPLKQVSVQYP
RRNKPTTNPYPDTLPDTLFASSYDDQQQLLRLTCRQSSWHHLIGNELRVLGLPDGTRSDAFTYDAKQVPVDGLNLETLCA
ENSLIADDKPREYLNQQRTFYTDGKNQTPLKTPTRQALIAFTETAVLTESLLSAFDGGITPDELPGILTQAGYQQEPYLF
PRTGENKVWVARQGYTDYGTEAQFWRPVAQRNSLLTGKMTLKWDTHYCVITQTQDAAGLTVSANYDWRFLTPTQLTDIND
NVHLITLDALGRPVTQRFWGIESGVATGYSSSEEKPFSPPNDIDTAINLTGPLPVAQCLVYAPDSWMPLFSQETFNTLTQ
EEQETLRDSRIITEDWRICALTRRRWLQSQKISTPLVKLLTNSIGLPPHNLTLTTDRYDRDSEQQIRQQVAFSDGFGRLL
QASVRHEAGEAWQRNQDGSLVTKVENTKTRWAVTGRTEYDNKGQTIRTYQPYFLNDWRYVSDDSARKEAYADTHIYDPIG
REIRVITAKGWLRQSQYFPWFTVSEDENDTAADALV
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