PAI Gene Information


Name : unnamed
Accession : AAL57566.1
PAI name : LEE
PAI accession : AF453441
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative enterotoxin
Function : -
Note : RorfF
Homologs in the searched genomes :   14 hits    ( 13 protein-level,   1 DNA-level )  
Publication :
    -Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Characterization and evidence of mobilization of the LEE pathogenicity island of rabbit-specific strains of enteropathogenic Escherichia coli", Mol. Microbiol. 44 (6), 1533-1550 (2002) PUBMED 12067342.

    -Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Direct Submission", Submitted (30-NOV-2001) Microbiology and Immunology, University of Melbourne, Melbourne, Victoria 3010, Australia.


DNA sequence :
ATGCCAATAATAAACAAATCGGCATCAAATTATGTTGAATATATTTCAAAAAACAATCCCCCTTATTTATCAAAAAAGAG
AGATGCCAGTATAAATCTAAATGGAAAGGTTAGTGATTGCAATGGGGAAATCATATGGTGTCGACATATAGCATCATATT
GGAGTGAGTTTTTTTGTAGTAATTCAGGAAAGATAGACTACGAAACATTTTCATCCCCTCAATTATTAAGCAAAGCTATT
GTAATTCAGGAAAACAAGGGGACAAATAATATTAAGGGTGATGTGTATTTTGTTGAAAATGAATCTTGGGGAAGCGTTAT
ATATAACCTTTTTCTTCAACTTGAGAAAGAGAATAAATCTCACACATCATTAGAAGTTCATTCTCCCGGACATGCAATGG
CTCTGGGCATTAAAATAAAAAACGACAAGGAAAATAAGTTTGTTATTAATTTCTATGATCCCAATCAGACCGCGACGCAT
AAACGAGTATTTTTTTGCACTAATAACATTTGTGATATAATAAACCTGACAGCATATGATTTTCTTAGTGAGCAATGTCT
GAAATGTTATGGGCTAAAAGAAGACACACTGTCACTTTTTGTGGATAAAACAAAATCGAATGACAACAATAATGTGTTTA
TAAAAAAATTACCTGATAATATTCTCCAAGGTGTTGTTATTAATTTTGCTATGGGAGCAGGACTAAGAGAGATAATAAAA
AAGGTATATAACGATACTCGATTTACAGATCTTACAAAATCTCAGATGAAAATCTTGTGTGAATCAAAAAATGTTAATAA
TGTTCCTGGGTTGCTTTTAGCTCTACAAAATGGACATGATAATGTAATTGATGAATATGGTACTTTAATTAAAAAGTCAA
ATCTTAATAAAGAAGAATTAATACATATATTATCTGCAAGAACTTTGGATGGAACCATACCTGGTTTATATCAGGCCCTT
CAAAATGGACATGCTCAAGCTATTAAGAGTTATGGTAACTTAGTTCTGGATACTATTGATAAAAATATAGATTTAGAGTA
TTTGCTTTCAGCATTTAAATATGAGGCACATAGCTCTAATAAATATACTCCTGGATTATTTTCTGCATTTCAAAATGGTC
ATGCAGACGCAATAAAGGCATATTGTGGCGTACTTGGCAATAGTAATTTGAAAAGAGGTGAGATAATCAGGATGCTTGAG
GCGAGAAATTATGATGGTGCACCAGGATTACTTCTTGCGTATCAAAATGGAGATATTAATACGATTCAGTCTTTTTTTGA
CTCACTAATAATGTTAGATATATCAAAGGATTTTATCGAAGAGTTATTGACTGCAAAACATTATGATTTTACGGGGTTAT
CATTAGCGATCAGTCATAGACATGATCATGTTGTCAAATTATACGGAAAGTTATTTAAAAAACTTGATACCAGTCCATAT
AAAATGTCAATTATCCTAGCATTAGCAATTGATTGCGAGAGAAATAATGCAAACATAATTATTGATAGTGAGTACAAGTC
AAATAAGGCAGTAAAGGAATATGTAGAAATTTTAAAAGAATTCAATATATGCCCAGAAAAGGTAGCAGAATACCTAAGCG
AGTTCAGCGGAAAACATTTCCTCGATGTATATAATTATTATTCCAATTGA

Protein sequence :
MPIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCSNSGKIDYETFSSPQLLSKAI
VIQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKSHTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATH
KRVFFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIK
KVYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEELIHILSARTLDGTIPGLYQAL
QNGHAQAIKSYGNLVLDTIDKNIDLEYLLSAFKYEAHSSNKYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLE
ARNYDGAPGLLLAYQNGDINTIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPY
KMSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHFLDVYNYYSN