PAI Gene Information


Name : unnamed
Accession : AAL61906.1
PAI name : GimA
PAI accession : AF289032
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative hydroxypyruvate isomerase GcxI
Function : -
Note : similar to Escherichia coli glycoxylate induced protein
Homologs in the searched genomes :   659 hits    ( 658 protein-level,   1 DNA-level )  
Publication :
    -Huang,S.H., Chen,Y.H., Kong,G., Chen,S.H., Besemer,J., Borodovsky,M. and Jong,A., "A novel genetic island of meningitic Escherichia coli K1 containing the ibeA invasion gene (GimA): functional annotation and carbon-source-regulated invasion of human brain microvascular endothelial cells", Funct. Integr. Genomics 1 (5), 312-322 (2001) PUBMED 11793250.

    -Huang,S.H., Chen,Y.H., Kong,G., Chen,S.H.M., Besemer,J., Borodovsky,M. and Jong,A., "Direct Submission", Submitted (18-OCT-2000) Pediatrics, Children's Hospital Los Angeles, University of Southern California Keck School of Medicine, 4650 Sunset Blvd., Los Angeles, CA 90027, USA REMARK Sequence update by submitter.

    -Huang,S.H., Stins,M.F. and Kim,K.S., "Bacterial penetration across the blood-brain barrier during the development of neonatal meningitis", Microbes Infect. 2 (10), 1237-1244 (2000) PUBMED 11008113.

    -Huang,S.H., Wan,Z.S., Chen,Y.H., Jong,A.Y. and Kim,K.S., "Further characterization of Escherichia coli brain microvascular endothelial cell invasion gene ibeA by deletion, complementation, and protein expression", J. Infect. Dis. 183 (7), 1071-1078 (2001) PUBMED 11237832.

    -Huang,S.H., Wan,Z.S., Chen,Y.H., Jong,A.Y. and Kim,K.S., "Direct Submission", Submitted (19-JUL-2000) Pediatrics, Children's Hospital Los Angeles, University of Southern California Keck School of Medicine, 4650 Sunset Blvd., Los Angeles, CA 90027, USA.

    -Huang,S.H., Wass,C., Fu,Q., Prasadarao,N.V., Stins,M. and Kim,K.S., "Escherichia coli invasion of brain microvascular endothelial cells in vitro and in vivo: molecular cloning and characterization of invasion gene ibe10", Infect. Immun. 63 (11), 4470-4475 (1995) PUBMED 7591087.


DNA sequence :
ATGGCAAAGTTTGCAGCGAATTTATCAATGCTTTTTACCGAGCATCCATTTATTGAACGTTTTGCGCAGGCAAGTCACGC
AGGATTCCACGGCGTTGAATATCTTTTTCCCTATGACTTTTCCACTGACGAGCTGGCTTCGCAACTGCATCAACATAATC
TGACTCAGGTTTTGTTTAATCTTCCTGCGGGTAACTGGCAAGAGGGTGAACGGGGTATTGCATGTCATCCTAGTCGGGCA
AAAGAATTTCAGGAGGGTGTTTGCAGAGCGATAGAATATGCCCAGGCCCTTAATTGTTCACAAGTTAATTGCCTTGCAGG
AAAACATCCAGGTGGTTATTCGCATGAACAATGTCATGAAACACTGGTCGAAAATTTGCGCTATGCAGTAGATAAATTGG
CTTCTCATGGCATAAAGTTAGTTCTGGAAGCCATTAATACAAAAGATATTCCCGGTTTTTTTGTTAACAACACCAGACAA
GCCCTCAATATTATTTATGATGTAAATCATCCTGATTTTCGCTATCAATACGATATTTATCATATGCAAATCATGGAAGG
GAATATTGCTACAACAATCAAAAACAACCTGAATAACATTGAACATATTCAATTAGCCGATAACCCTGGGCGTCATGAAC
CAGGGACGGGAGAAATTAATTACCCGTGGTTGTTAAATTATATAGACCAGATTGGTTATCAGGGATGGATTGGTTGCGAA
TATGTTCCATCTACGACAACGACTGAAAGTCTACGCTGGCTAAAAAACGAGACTCAATTTTAA

Protein sequence :
MAKFAANLSMLFTEHPFIERFAQASHAGFHGVEYLFPYDFSTDELASQLHQHNLTQVLFNLPAGNWQEGERGIACHPSRA
KEFQEGVCRAIEYAQALNCSQVNCLAGKHPGGYSHEQCHETLVENLRYAVDKLASHGIKLVLEAINTKDIPGFFVNNTRQ
ALNIIYDVNHPDFRYQYDIYHMQIMEGNIATTIKNNLNNIEHIQLADNPGRHEPGTGEINYPWLLNYIDQIGYQGWIGCE
YVPSTTTTESLRWLKNETQF