PAI Gene Information


Name : rhs-core
Accession : AAN64198.1
PAI name : macrophage toxin pathogenicity island
PAI accession : AY144117
Strain : Photorhabdus luminescens TTO1
Virulence or Resistance: Not determined
Product : Rhs
Function : -
Note : similar to Rhs element associated core extension protein Z0705
Homologs in the searched genomes :   19 hits    ( 19 protein-level )  
Publication :
    -Waterfield,N.R. and ffrench-Constant,R.H., "Direct Submission", Submitted (22-AUG-2002) Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK.

    -Waterfield,N.R., Daborn,P.J. and ffrench-Constant,R.H., "Genomic islands in Photorhabdus", Trends Microbiol. 10 (12), 541-545 (2002) PUBMED 12564983.


DNA sequence :
ATGTCACTTGGCGATGAAATCGTCACCCGGATAGCGCGGGTTAGCGCCCGGCACTCGGTACGCGTCTCCCCGCCGCAGGG
CACTCCCGGTCCGGCCGCGGCCCGTGAGGGCGACCCGATTAAACATGCCAGCTTCCTGGGGGCGCTGGCGGGCGCCATTA
CCGGGGCGTTGATAGGGGCGGCGGTCTTTGCCGCGGCATCCGCACTGGTGGGACTGACCGTTCTCACCGGGGGATTAGCG
ACCGTCGCGGTCATTGCCCTGGGAACCGCGGCCACATTTGCCCTTGGCGATGTCATCAGCGCCGCCAGTTCGGCCGTCAC
GAAAATGGTGGACAGCATCGGCCCGCCGAGCGGTACACTGGCGAGTGGCTCCCCCAATGTTTTTATCGAAGGCAAACCGG
CGGCCAGAGCCACCACCGATATCGCCGCCTGTAGTCAACACCCGGCGCCGCCCCTGATTGCCCAGGGCAGTGAAACCGTG
TTTATTAACGGTTCTCCGGCAGCCCGGGTGGATGACAAACTGGCGTGTGGCGCCACCATAAAATCCGGGGCTAAAACGGT
GTTTATCGGCTCCGGTCAGGGAACTTACCTGGCTGTCGCCGAAGAGTTCTCCGCCTGGGAACGGGCGATACTGATGGCGG
TTGAATTTCTGGCGCCGCCGTCACGAGGCGCCCTTAAAGGGCTGGGTAAGCTGTTTACCCGACAGGCCGGTAAAAAGGTC
GTCAGCGGGGCGATTGCCGGCGTCAGGCATGCCGCGAAGATAATCACGGGGAAAACCCTCTGCTGTGCCAAAACCGCCTT
CAAAGAAACTCAGGGGGTGAAACGTTACCGGGAAGCGACGAAAAAATTCTTTACCGGCGACCCGATTGACGTCACCACCG
GCCAGCTGTTTGACCAGCGGACCGATATCACCCTCGGCCAGACCCTGCCGCTGGTGTTTCTGCGCAGCTGGGCGCCGGGG
GAACAGGGCTTACTGGGGCCGGGCTGGACGGACAGCTTCTCCGAATGCGCCCTTGCCACCGGCGACCGGGTAGAAATCCG
CACCACCGAAGGGGCATCGCTTTACTTTGCCTTACCGGCCGCTTATACCCACAGCGTTAACCCGGACCACCCGGATTTCA
CCCTCAGCCGGGGAGAACAGGGCTATATTCTCCGGCACCGGGATTCACCGGTTCGCAAGTATTTTGCGCTGGCCTCTCCG
GCCTCATCCGAAGGGACACAGCGCTGGCGGCTCACGGAACACCGGGACGTGTATGACAACCGGCTGCGGTTTATCTATAA
CGAGCACAGTCAACTGACACAGGCTCTCCACAGTGACGGGCCGGAGCTGACGCTGCTTTATAACCGGCGCGGACAACTGA
CAGAGATTCTCCGTACCGATGAAGGGTTACAGGAAGTGATGGCCCGTTATCACTACCATGATAACGGCCGGCTGGCGGAA
GCGGACAGCGCCCAGCATTTTCATCTGTACTATGAATATAATGCGCAGGGCCTGATAAGCCGCTGGTCCGATGGCGACCA
GACCTGGGTGGATTACCGTTATGATAAACAGGGGCGCTGTACCGACAGCGTGGGAGCCGGCGGCTACTATCCGGTTCACC
TGGATTACGCCCCCGGCATCACCCGCTCCACCACCCCACAGGGGCACACCACCACCTGGCATTACAACGACCAGCAGTTA
ATAACTGAAATCCACACCCCGCGCGGCGGCGTGACCCGTTATGACTATGACCGCTGGGGCCATCTGGTCAGACAGATATC
ACCGGAGGGGGAAACCCTGACGCTGACTTATCTGGCCGATACCGGCCGGGTAACCTCGCTGACGGAGGCCACGGGCGCGG
TATGGCAATACAGCTATGAGGCTGACAGCCTGCAACTGACCGGCATGACCGACCCGCTGCAACGCACCTGGCTGCCCCAG
TATGATGAACAGGGCCAGCCGGCCGGATTTATTGCGCCGGACGGCCGGAAAACCACGCTGACCCGCAATGCCTTCGGGCT
GGTGACGGCCGAAACAGACCCGGACGGCAACTGTCGCACACAGGAATATGATAAGCATCAGCGGCTGGTGCGGGTGCTGG
ATGAAGAGAACCGGACCGTCAGTCTGGGTTATGACAGTCAGGACCGGCTGCGCAGCCTGACCGCGGCGGGGGCGCTGTGG
CGCTGGCGTTACGACCGTCATCACCGGGTGGCGGTCAGTGACCGGCCGGACAACCAGCTGGAACACTTCACCCATGACCG
CCACGGCAACTTAACCTGCTGGACCGATGCCCGCGGCGTAGAATGGCAGGTCGAATACGGCCCGTTTGACCTGCCGGTCG
CCCGGCGTGACGGCGAGGGGCATCGCTGGCAGTATCGTTATGATGCCGACACGCTGCAACTGACGCAGGTGATTAACCCG
CAGGGGGAAACTTACACCTATACCCTGGATGCCGACGGGCGGGTTATCACCGAGCAGGATTACGCCGGCACGCAGTGGCA
TTATCGCTATGACCGGTCGGGGAACTGCATTGAAAAGCGGGACGGGGAAGAGAACGTGACCCGCTATGATTATGATGCCG
CCCGCCGGCTGACGACGCTGCTCGCCCCGGAAGGGACCACCCGTTATCATTACGACATCCTGGGCCGGCTGTTAACCGTG
GAGTCGCCGGACAGCGCCCTGCATTTTGAATATGACGAGCAGGGCCGGATAGTACGGGAAATTCAGCCGCACGGAGAGAT
TCTGCGTCACTACCCGGATAACCGCGCGGTAGAACGGCAGTTGCTGACCGGCGAAAAAACGCCGGTTGCCGGCCCGGCCC
GGTTTAGCGGCCAGACCCACCTCTGCCGCTGGCAGAGCCGGCTGGAAGTGAACCGGGTGGGGGAACTGATTAAGCTGGCG
CTGGAAGGACAGGCGCCCCTGACCCTGAAACGGGATGACGCCGGCCGGGATACGGGGCGTTACGTGGAAGGGGGATTTAT
TCTGCGCCAGCAGTACAGCCTGATGGGCCAGTTAACCGCGCAACGGGCGGGCCGTAATCCCCATTTCTTCCGGCCGGCTG
AACTGGAAGAGATTGCCGGACCCGCTTACGCGGGGGTGGCCCGCCGGTATGAATACGATGCCGCGCTGAACCTGACCACC
GTCAGTGATGACGGGCAGCCGTTAAATTATCTCCTCAACGGCAATGGCCAGGTGATGTCGGTGGGCGAGGGCCGGACACT
GCGGGAGCATTATCAGTATGATGAGACCGGGTACCCGTCAAGACGGTTTGACGGGGTGCAGGAGATTATGGGGGAAACCC
TCTATCAGGAGGGGCATCGCCTGAACTGGGTGGACTCGCACCGGTTTGTTTACGACCGGGCCGGCCGCATGCAGGAGAAA
CAGTTTTTAGCGGAAGGTTGCCGGCTGGCGCTGACAAAATACCGGTGGAACAGCCAGAATCAGCTGACCGGGATTATCAC
CCCGGACGGGATACCGTGGGAATATCGCTATGACGCTTTCGGGCGACGGACAGAAAAACGGTGTATCCAGAGCGGTAAGC
GGACCACCTATGTGTGGGACGGCGATGTGCCGGCGGAAATTCGGGAATATCAGCACGGCCGGCTGAAAATGGTCCGCCAT
CTGGTGTTTGACGGCTGGGAGCTGATAGCGCAGCAGACGCAGGCGTTTACGCTTAATCTGGACAACCGGGTGGAGCTGAT
GGCTGGGGAGGTGCAGACCCAGTATGCGGTCAGCGCCCCGACCGGCGAGCCGCTGGCGCTGTTCGACCCGACGGGTAAAC
GGGTGTGGCGGCGGCCGAAGCAGTCGCTATACGGCCTGCGTCTGAGCGGACACGGCGAGAATCCCCAGCTCGATCCGGGC
CTCCGATTCGCCGGACAACTTTTTGATGAGGAAAGTGGTTTATTTTATAATCGGTTCCGCTATTATTTGCCGGAAGCGGC
GTGCTACCTCAGCCCTGACCCGCTCGGGCTAAATGGGGGTCCGAATCCGTATGCGTACGTCCATAATCCGGCAAACTGGA
TTGATCCGCTGGGTCTTGCTGGCTGTCCAACTGACTATAGTCAAAAGAGAAAATATTGGTCATCAGACCCGATTACATTT
AAAGGGAATAAGGTATATCAAAGAAATGATCTGTTTGATCCTCAACATATGTCGGCATGGCGAGATCAAGGAAAAGTGAT
TCGAGGAACTAATATTGAACGAATGGCATCAGGTAGGGCCCCTGTTGGGCATGATGGAAAAGCTGTAAACTTACATCATA
TGTTACAAACTCAAAACGGTCCTATTGCTGAAATGAGCCAAACATTCCATAAAGTTAATCACAAAGCAATTCATATAAAT
CCTAATACGATTCCTTCAGGAATAGATCGAGCTACATTTAATAAATGGCGAGAACAGTATTGGATCAATAGAGCTGGAGA
TTTTAAATGA

Protein sequence :
MSLGDEIVTRIARVSARHSVRVSPPQGTPGPAAAREGDPIKHASFLGALAGAITGALIGAAVFAAASALVGLTVLTGGLA
TVAVIALGTAATFALGDVISAASSAVTKMVDSIGPPSGTLASGSPNVFIEGKPAARATTDIAACSQHPAPPLIAQGSETV
FINGSPAARVDDKLACGATIKSGAKTVFIGSGQGTYLAVAEEFSAWERAILMAVEFLAPPSRGALKGLGKLFTRQAGKKV
VSGAIAGVRHAAKIITGKTLCCAKTAFKETQGVKRYREATKKFFTGDPIDVTTGQLFDQRTDITLGQTLPLVFLRSWAPG
EQGLLGPGWTDSFSECALATGDRVEIRTTEGASLYFALPAAYTHSVNPDHPDFTLSRGEQGYILRHRDSPVRKYFALASP
ASSEGTQRWRLTEHRDVYDNRLRFIYNEHSQLTQALHSDGPELTLLYNRRGQLTEILRTDEGLQEVMARYHYHDNGRLAE
ADSAQHFHLYYEYNAQGLISRWSDGDQTWVDYRYDKQGRCTDSVGAGGYYPVHLDYAPGITRSTTPQGHTTTWHYNDQQL
ITEIHTPRGGVTRYDYDRWGHLVRQISPEGETLTLTYLADTGRVTSLTEATGAVWQYSYEADSLQLTGMTDPLQRTWLPQ
YDEQGQPAGFIAPDGRKTTLTRNAFGLVTAETDPDGNCRTQEYDKHQRLVRVLDEENRTVSLGYDSQDRLRSLTAAGALW
RWRYDRHHRVAVSDRPDNQLEHFTHDRHGNLTCWTDARGVEWQVEYGPFDLPVARRDGEGHRWQYRYDADTLQLTQVINP
QGETYTYTLDADGRVITEQDYAGTQWHYRYDRSGNCIEKRDGEENVTRYDYDAARRLTTLLAPEGTTRYHYDILGRLLTV
ESPDSALHFEYDEQGRIVREIQPHGEILRHYPDNRAVERQLLTGEKTPVAGPARFSGQTHLCRWQSRLEVNRVGELIKLA
LEGQAPLTLKRDDAGRDTGRYVEGGFILRQQYSLMGQLTAQRAGRNPHFFRPAELEEIAGPAYAGVARRYEYDAALNLTT
VSDDGQPLNYLLNGNGQVMSVGEGRTLREHYQYDETGYPSRRFDGVQEIMGETLYQEGHRLNWVDSHRFVYDRAGRMQEK
QFLAEGCRLALTKYRWNSQNQLTGIITPDGIPWEYRYDAFGRRTEKRCIQSGKRTTYVWDGDVPAEIREYQHGRLKMVRH
LVFDGWELIAQQTQAFTLNLDNRVELMAGEVQTQYAVSAPTGEPLALFDPTGKRVWRRPKQSLYGLRLSGHGENPQLDPG
LRFAGQLFDEESGLFYNRFRYYLPEAACYLSPDPLGLNGGPNPYAYVHNPANWIDPLGLAGCPTDYSQKRKYWSSDPITF
KGNKVYQRNDLFDPQHMSAWRDQGKVIRGTNIERMASGRAPVGHDGKAVNLHHMLQTQNGPIAEMSQTFHKVNHKAIHIN
PNTIPSGIDRATFNKWREQYWINRAGDFK