Name : hrcC
Accession : AAT96152.1
PAI name :
PAI accession : AY597277
Strain :
Virulence or Resistance: Virulence
Product : HrcC
Function : -
Note : PAI-R1-ORF60
Homologs in the searched genomes : 15 hits ( 15 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGCGCAAGGCCTTGATGTGGTTGCCTTTGTTGTTGATCGGGATGGTCCCACCGACATGGGCGGCCATCCCCGATTCCTG
GAAGCACACGGCCTACGCCTATGATGCTCGGGAAACTGAATTGAGTACGGCTTTGAGCGACTTTGCCAAAGAGTTCGGAA
TGGCGCTGGATATGGCACCGATTTCGGGGAAACTCGACGGCCGGATCCGCGCCGAAAACCCTCAGGAGTTTCTTGAGCGG
CTCGCTCAGGAGTATCACTTCCAATGGTTTGTCTACAACGACACGCTGTACATCAGCCCGGCCAGTGAGCACACCTCGGC
ACGCATCGAAGTGTCCTCCGATGCCGTGGATGACCTGCAGACCGCCTTGACTGATGTGGGCCTGCTGGACAAGCGTTTCG
GGTGGGGCTCGCTGCCCAACGAAGGGGTCGTGCTGGTTCGCGGCCCTGCGAAGTACGTCGACCTGGTGCGTGACTACAGT
AAAAAAGTCGACTCGACCGACAAGGGCGAAAAGCAGGACGTGGTCGTGTTTGCGCTCAAGTATGCGAACGCGGCGGATCG
CACCATTCGGTATCGTGATCAGCAACTGACCGTCGCCGGTGTGGCGAGCATTCTTCAGGAGTTGCTGGACACCCGTTCTC
GCGGCGATTCCATCAACGGCGTCAACCTGTTGGGGCATGGTCATCCAGGCGGTGGACTCTCGGAGGGCGGCGGTTCGGAT
GAACCCAATGTGCCTTACAACCTGAGTGCCAACGGCATCGACACCGGTGCCCTGCAGCAAGGCCTTGACCGGGTCTTGAA
CTACGGCAGCAAGAAGTCTGGCAAAGGTAAAGCCGGGGGTGGTCGTGCGAACATCCGCGTCAGTGCCGACGTTCGTAACA
ACGCGGTCCTGATCTATGACTTGCCTGACCGCAAGGCCATGTACGAGAAGCTGATCAAAGAGCTGGACGTCCCGCGCAAT
TTGATTGAAATCGATGCGGTGATCCTGGACATCGACCGTAACGAACTGGCTGAGCTGGCCAGCCGCTGGAACTTCAAATC
GGGCGGCGTCAATATGTTTGACGCGGGCACCACCTCGACACTGTTCATCCAGAATGCCGGCAAGTTCTCTGCCGAACTGC
ACGCGCTGGAAGGCAATGGCTCAGCGTCTGTGATCGGCAATCCGTCGATTCTGACGCTGGAAAACCAACCCGCCGTGATT
GACTTCAGTCGAACCGAGTACATCACCGCGACGTCCGAGCGTGTGGCCAATATCGAGCCCATCACCGCTGGCACCAGCTT
GCAGGTCATTCCACGCTCGCTGGATCACGATGGCAAACCTCAGGTGCAGCTGATTGTCGACATCGAGGACGGTCAAATCG
ATGTCTCGGACATCAATGCCGACCAGCCGAGCGTACGCAAAGGAAACGTCAGCACCCAGGCGGTCATCGCCGAGCATGGT
TCACTGGTTGTCGGCGGATTTCATGGCCTTGAAGCCAATGACAAAGTTCACAAGATCCCGCTGCTGGGCGACATTCCCTA
CATCGGCAAACTGCTGTTTCAGTCGCGCAGCCGTGAAATCAATCACCGTGAGCGGTTGTTCATCCTGACGCCGCGACTGA
TTGGCGATCAGGTCAACCCGGCGCGCTACGTACAAAACGGTAACCCGCACGACATCGATGCCCAGATGAAAACCATCAAA
GAGCGTCGTGACGGTGGAGACCTGCCTACCCGGAACGATGTTCAGAATGTCTTCACGCAAATGGTCGACGGTGTTGCGCC
ACCCGGTATGCATACGGGCGAAACCATGCCCTTCGAAACCGACAGCTTGTGCGATCCGGGCGATGGGCTGACACTCGATC
AGACGCGTTCGCAGTGGTTTGTCCAGAAGGGCTGGGGCGTTGCCGTGGTCGTGGCGCACAACAACACCAACAAGCCGGTG
CGTATCGACGAAAGCCGATGTGGCGGTCGCTGGGTGATCGGCGTCACGGCCTGGCCTCATGCATGGGTACAGCCGGGTGA
GGAAAGCGAAGTGTACATCGCTATGCGCCAGCCTCAGCTATCGAAAATGGCTAAGGAAAGCAGACCTTCGCTGCTCAGGA
GAACCGCACCATGA
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| Protein sequence : | |
MRKALMWLPLLLIGMVPPTWAAIPDSWKHTAYAYDARETELSTALSDFAKEFGMALDMAPISGKLDGRIRAENPQEFLER
LAQEYHFQWFVYNDTLYISPASEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGSLPNEGVVLVRGPAKYVDLVRDYS
KKVDSTDKGEKQDVVVFALKYANAADRTIRYRDQQLTVAGVASILQELLDTRSRGDSINGVNLLGHGHPGGGLSEGGGSD
EPNVPYNLSANGIDTGALQQGLDRVLNYGSKKSGKGKAGGGRANIRVSADVRNNAVLIYDLPDRKAMYEKLIKELDVPRN
LIEIDAVILDIDRNELAELASRWNFKSGGVNMFDAGTTSTLFIQNAGKFSAELHALEGNGSASVIGNPSILTLENQPAVI
DFSRTEYITATSERVANIEPITAGTSLQVIPRSLDHDGKPQVQLIVDIEDGQIDVSDINADQPSVRKGNVSTQAVIAEHG
SLVVGGFHGLEANDKVHKIPLLGDIPYIGKLLFQSRSREINHRERLFILTPRLIGDQVNPARYVQNGNPHDIDAQMKTIK
ERRDGGDLPTRNDVQNVFTQMVDGVAPPGMHTGETMPFETDSLCDPGDGLTLDQTRSQWFVQKGWGVAVVVAHNNTNKPV
RIDESRCGGRWVIGVTAWPHAWVQPGEESEVYIAMRQPQLSKMAKESRPSLLRRTAP
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