Name : unnamed
Accession : AAT96224.1
PAI name :
PAI accession : AY597278
Strain :
Virulence or Resistance: Not determined
Product : Pspto1371-like protein
Function : -
Note : similar to Pto DC3000 Pspto1371; PAI-R1-ORF79
Homologs in the searched genomes : 29 hits ( 29 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : | |
ATGGCTTGTTACAACTCGGTAAACAGCCGTTCCCCAATCCTGGACAGGAGTATCGCCATGACGGGTCTTTTTGAAAAAAA
ATGGAAGTGCTTCAAACGGACGCTGACTTACGTCGGCTGGTCGCTGTTGTGGTTGCTGTTGTGGGACATCGGCGTGACGG
TGGACTTCATGCTAATGGAAGGGATTGGCATAGATCTCCCCCTGATGCCGTTGACGCTACTGTGTTCGGCTCTGATCGTA
TTGATCAGCTTTCGTAACACCAGCGCCTATAACCGCTGGTGGGAAGCGCGAACCTTGTGGGGCGCGATGGTCAACACTTC
CCGCAGTTATGGTCGTCAAGTATTGACCCTGATCGACGGGCAAGGCACACGCCGGGAAAACCCGGTGAAAGGGTTATTGT
TTCGCCGCCATGTGGCCTATCTGCGGGCACTGCGGGCGCACCTGAAAGGTGATGTCAGTACCGCAAACCTCGATGGCTTG
CTCCCCGATTCTGAAATCGAGCGTTCGTCTGGCAGCCATAACTTTCCCAATGACATCCTGAGTGGCTCGGCGGCGATCAT
TGCTGACGAGTTCGTGGCAGGGCGACTGGACAGCATCCGGTTTTCCCGGCTGGAAACGACGCTGGTCGATTTATCCAATT
GCCAGGGCGGTATGGAACGCATCGCCAACACACCGCTGCCCTACCCTTACATTTACTTCCCCAGACTGTTCAGCGCGCTG
TTCTGCATCATCATGCCGTTGAGCATGGTGACGACCCTGGGCTGGTTCACACCGATCATTTCCACGGTCGTGGGCTGCAT
GCTGCTGGCCATGGAACGCATCGGCACGGATCTGCAGGCGCCGTTCGGCGACAGTCAGCACCGGATCCGCATGGAAGACC
TGTGCCTGAACATCGAAAAGAACCTGTGCTCGATGTACAACGAGCCCGAACAGGGGCCGTTGCTGGCACACCTGAAAGCG
ATGATCGGGCCGATTGCGCCCCCAGTTCGTCAGGCGACGGCGTGA
|
| Protein sequence : | |
MACYNSVNSRSPILDRSIAMTGLFEKKWKCFKRTLTYVGWSLLWLLLWDIGVTVDFMLMEGIGIDLPLMPLTLLCSALIV
LISFRNTSAYNRWWEARTLWGAMVNTSRSYGRQVLTLIDGQGTRRENPVKGLLFRRHVAYLRALRAHLKGDVSTANLDGL
LPDSEIERSSGSHNFPNDILSGSAAIIADEFVAGRLDSIRFSRLETTLVDLSNCQGGMERIANTPLPYPYIYFPRLFSAL
FCIIMPLSMVTTLGWFTPIISTVVGCMLLAMERIGTDLQAPFGDSQHRIRMEDLCLNIEKNLCSMYNEPEQGPLLAHLKA
MIGPIAPPVRQATA
|
|
