Name : unnamed
Accession : AAT96245.1
PAI name :
PAI accession : AY597280
Strain :
Virulence or Resistance: Not determined
Product : sarcosine oxidase
Function : -
Note : PAI-R2-ORF40
Homologs in the searched genomes : 18 hits ( 18 protein-level )
Publication :
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Halldorsdottir,S.S., Kreitman,M. and Bergelson,J., "Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis", Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5887-5892 (2006) PUBMED 16581904.
-Araki,H., Tian,D., Goss,E.M., Jakob,K., Kreitman,M. and Bergelson,J., "Direct Submission", Submitted (12-APR-2004) Ecology and Evolution, University of Chicago, 1101 E. 57th St., Chicago, IL 60637, USA.
| DNA sequence : |  |
ATGGAGCAACAATGTGACGTGGCCGTTCTGGGCCTGGGCGCGATGGGTGCCGCCACGCTTTATCAGTTGGCCAGAGAAGG
CGCGGATGTGCTTGGGATCGACCAGTACGCACCGCCCCACACGCAGGGTTCCAGCCATGGCGATACGCGCATCACCCGGC
TGTCGGTAGGCGAAGGGCCGCAATACCTGCCGCTGGTGCGCAATTCGCACCGCATCTGGCGCGAGCTTGAAGCAATGACC
GGCGAGCCCCTGTTCGAGCAGTGCGGCGTGTTGGTAATGACATCCAGCCCTGCCTATGACCCGCAAGACCCGGAAGACTT
CACCCACAAGACAATCGCCCTCGCCCGCGAGTACGGCGTAAGGCATGAAGTGCTTTCAGCCGAAGACATTCGCGAACGAT
TTCCGCAGTTCAGCCCGGTCCTGGACACCGCCATCGGCTACTTCGAACCTGACGGAGGTTTCGTAAGGCCCGAGCGCTGC
ATCGCAGTCCAGTTGCAACTGGCCGGAAAACTGGGCGCGCGTGTCCGCCTGAACGAAACCGTGACCCGCCTGCAGGCTTA
TGGTGATCAGGTGCGCATCACTACCGATCAGGGATCGATTATCGCGAACAAGGTGGTGGTCAGTGCCTGGATGTGGTCGT
CGCAGCTGCTGGGCGAGCCCTTTACCGATCTGCTGCGCGTCTGTCGGCAGCAGCTGTTCTGGTTCGCGCTGGAAGACACT
GCCGCCTTCGCCCCGGTATCGCCCAGCTTCATCCTGACCCACGGCCCTGGCGAGGTGGATATCAATTACGGCTTCCCGCC
ATTACCCGGTGAAGGCAGCATGAAGATTGCCACTGAGCAGTACGTGCATACTTCTGTGGCGTGCGAGCTGGACCGCAGCA
TCAGTGCCGAGGACGAACAGACGATGTTCCAGACGCAGGTCAGCGGCAAAATTGCAGGCATAAAGGCAGACGTGGTGAAG
TCATCGGTGTGCGCCTACACCGTGACGCCGGATTACCATTTCATCATTGACGACCACCCGCACCTGAAGAACGTGACCGT
GGTCTCGGCCTGCTCAGGACACGGCTTCAAGCATTCCGCTGGTCTGGGGATGGCGCTGGCGCAGCGTTGTCTGCGCGGCT
CCAGCGAGGTGGACCTGTCGGCATTCTCGCTCAAGCGTTTCGGCAAAACCGCCTGA
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| Protein sequence : | |
MEQQCDVAVLGLGAMGAATLYQLAREGADVLGIDQYAPPHTQGSSHGDTRITRLSVGEGPQYLPLVRNSHRIWRELEAMT
GEPLFEQCGVLVMTSSPAYDPQDPEDFTHKTIALAREYGVRHEVLSAEDIRERFPQFSPVLDTAIGYFEPDGGFVRPERC
IAVQLQLAGKLGARVRLNETVTRLQAYGDQVRITTDQGSIIANKVVVSAWMWSSQLLGEPFTDLLRVCRQQLFWFALEDT
AAFAPVSPSFILTHGPGEVDINYGFPPLPGEGSMKIATEQYVHTSVACELDRSISAEDEQTMFQTQVSGKIAGIKADVVK
SSVCAYTVTPDYHFIIDDHPHLKNVTVVSACSGHGFKHSAGLGMALAQRCLRGSSEVDLSAFSLKRFGKTA
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