Name : speC
Accession : AAX39462.1
PAI name : Hrp PAI
PAI accession : AY906859
Strain : Erwinia amylovora ATCC 49946
Virulence or Resistance: Not determined
Product : SpeC
Function : -
Note : similar to ornithine decarboxylase of Escherichia coli K12
Homologs in the searched genomes : 458 hits ( 458 protein-level )
Publication :
-Oh,C.-S., Kim,J.F. and Beer,S.V., "The Hrp pathogenicity island of Erwinia amylovora and identification of three novel genes required for systemic infection", Mol. Plant Pathol. 6 (2005) In press.
-Oh,C.-S., Kim,J.F. and Beer,S.V., "Direct Submission", Submitted (26-JAN-2005) Plant Pathology, Cornell University, 334 Plant Science Building, Ithaca, NY 14853, USA.
DNA sequence : | |
ATGACTCCTTTAAAAATTGCAGCCAGTACTACCGTGGCTATTCACCTTCGCACCGGGCGTGAAGTTGTTACGCTGGATAA
CACTGATTTTACCGACGTGGCGGCAGTGGTGCTTTCCGTCAGTGACTCTCGATCCGGCATGTTGGCGCTGTTGCGCCATA
CCGGTTTTAAGCTGCCGGTATTTATTGCGTTGGACGATATCTCGCAGGCGGTGGACTTACCGCAGGTTGATGGCGTGCTG
GACGGTGATGCTAATGATGCTGCGCTGCTGGAATCCGCGGCTGCGGAGTACCAGTCAAAGCTGCTGCCACCGTTTTTTCA
GACGCTGACTAAATATGTCGCGATGGAGAACAGCACGTTTGCCTGCCCGGGCCACCAGGGCGGTGCCTTTTTCAAAAAGC
ATCCGGCGGGACGCCAGTTTTTCGACTTCTTCGGTGAAAATGTTTTTCGTGCCGATATGTGCAACGCCGATGTGAAACTG
GGTGATTTACTGATCCACGAAGGTTCGGCTAAACATGCGCAGAAGTTTGCCGCACGGGTATTTAATGCCGATAAGACCTA
CTTTGTGCTGAACGGGACTTCCAGCGCTAACAAAGTGGTGACCAATGCGCTGCTGACGCGTGGCGATCTGGTATTGTTTG
ACCGCAACAACCACAAATCCAACCATCATGGTGCGCTAATCCAGGCGGGAGCCACACCTGTTTATCTTGAAACCGCACGC
AATCCGTTCGGTTTTATCGGTGGTATCGATGCGCACTGCTTTGATGAAACCTGGATCCGTCAGCAAATTGCCCGGGTAGC
AGCGGATCGTGCCGATGATGCACGCCCGTTCCGCCTGGCGGTGATCCAGCTTGGCACCTATGACGGTACGGTATATAACG
CACGTAAGGTGATCGACAGCATTGGCCACCTGTGCGACTACATTCTGTTTGACTCGGCATGGGTCGGTTATGAGCAGTTT
ATTCCGGTGATGGAAGCCTGTTCCCCGTTGCTGCTCGACCTGCAACCCGCCGATCCCGGTATTTTCGTCACGCAATCGGT
GCACAAGCAGCAGGCCGGGTTCTCACAGACCTCTCAGATCCATAAAAAAGATAATCATATACGCGGGCAGCGACGTTTTT
GCAGCCATAAGCGCCTGAATAACGCCTTTATGCTGCATGCCTCTACCAGCCCTTTCTATCCGCTGTTTGCCGCGCTGGAT
ATTAACGCCAAAATACATCAGGGTGAGGCTGGCCGGCGCTTGTGGCATGAATGTGTGATGCTGGGTATTGATACGCGTAA
AGCCATTCTTGAGCACTGCGCAATGATTAAGCCGTTTATACCTGACGAAGTTGACGGGCAGCCTTGGCAAAACGCGCCTG
GCGCGATAATCGCCAGCGATGCGCGCTATTTTAGCTTTGCCCCAGGCGCGCAGTGGCATGGTTTTGCTGGCTATGAAAAG
GATCAGTACATGGTCGATCCCTGTAAGCTGCTGCTAACCACGCCGGGCATTAACGCCGCCAGCGGTGAATACGCGTCGTT
TGGTATTCCGGCCACTATTCTGGCCAACTATCTGCGCGAGAATGGCGTGGTACCGGAGAAGTGCGATCTGAACTCCATTC
TGTTCCTGCTAACCCCGGCGGAGAGCGCAGAGAAGATGGCCCGGCTGGTGGCGAAGCTGGCGCAGTTTGAGCAGCACATC
AAAGAGGATGCGTTGCTACGCGATGTGCTGCCGACCATCTATCGTAAAAATGCGGCGCGTTATGAAGGTTACACCTTGCG
CCGTCTGTGCCAGGAGATGCACGACCTGTATGTCAGCCACAAGGTAAAAGACCTGCAAAAGGCGATGTTCCGCCAACAAA
GTCTGCCCCAAATTGCCATGAACCCGCAGGACGCCAATATCGAATTTATCCGCGGCAACGTCGAACTGGTACCCATTTCA
CAGGCTGCGGGGCGTGTTGCGGCAGAAGGCGCACTGCCTTATCCACCGGGCGTGCTGTGTGTGGTACCTGGCGAGATATG
GGGCGGGGCGGTTCAGCGTTACTTTTTGGCGTTGGAAGAGGGGCTAAATCTGCTGCCGGGCTTCTCACCGGAGTTGCAGG
GCGTCTATGCGGTAGCCGATGAAAAGGGCATTAAGCACCTGCAGGGTTATGTGATCGTTGAATAG
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Protein sequence : | |
MTPLKIAASTTVAIHLRTGREVVTLDNTDFTDVAAVVLSVSDSRSGMLALLRHTGFKLPVFIALDDISQAVDLPQVDGVL
DGDANDAALLESAAAEYQSKLLPPFFQTLTKYVAMENSTFACPGHQGGAFFKKHPAGRQFFDFFGENVFRADMCNADVKL
GDLLIHEGSAKHAQKFAARVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR
NPFGFIGGIDAHCFDETWIRQQIARVAADRADDARPFRLAVIQLGTYDGTVYNARKVIDSIGHLCDYILFDSAWVGYEQF
IPVMEACSPLLLDLQPADPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQRRFCSHKRLNNAFMLHASTSPFYPLFAALD
INAKIHQGEAGRRLWHECVMLGIDTRKAILEHCAMIKPFIPDEVDGQPWQNAPGAIIASDARYFSFAPGAQWHGFAGYEK
DQYMVDPCKLLLTTPGINAASGEYASFGIPATILANYLRENGVVPEKCDLNSILFLLTPAESAEKMARLVAKLAQFEQHI
KEDALLRDVLPTIYRKNAARYEGYTLRRLCQEMHDLYVSHKVKDLQKAMFRQQSLPQIAMNPQDANIEFIRGNVELVPIS
QAAGRVAAEGALPYPPGVLCVVPGEIWGGAVQRYFLALEEGLNLLPGFSPELQGVYAVADEKGIKHLQGYVIVE
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