PAI Gene Information


Name : intB
Accession : ADN38962.1
PAI name : HPI
PAI accession : GQ903053
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : P4-like integrase
Function : -
Note : P4-like integrase from high-pathogenicity island (HPI)
Homologs in the searched genomes :   30 hits    ( 26 protein-level,   4 DNA-level )  
Publication :
    -Schubert,S., Weinert,K., Norenberg,D. and Denamur,E., "Prevalence and phylogenetic history of the TcpC virulence determinant of extraintestinal pathogenic Escherichia coli (ExPEC)", Unpublished.

    -Schubert,S., Weinert,K., Norenberg,D. and Denamur,E., "Direct Submission", Submitted (11-SEP-2009) Bacteriology, Max von Pettenkofer-Institut for Hygiene and Microbiology, Marchioninistr. 17, Munich, Bavaria 81377, Germany.


DNA sequence :
CTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGTAACATAATGCGCCATGCGGTCCATCAGGAGTTAATCGATACGAA
CCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCCGCCGCTGGAGCGGCTGCCTG
AACTGCTTGAACGTATTGGGGCATATCATCAGGGCCGTGAACTGACCCGGCATGCCGTTCTGCTGATGCTGCATGTGTTC
ATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGATACCCGCGACGCG
AGAACCCATTATTGGCGTGCGTTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCCTCTCAGAACAGT
CCATCGCCATTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCATAACCCGTATAAG
CCAATGTGTGAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTGCGGTCACGGCTT
CCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGATGAGTCATCAGG
AGCGCAATACCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTGGAAGCCCGCAAAGCGATGATGCAGTGGTGGTCG
GATTATCTGGAAGCATGCCGAGAATCTTATGCACCGCCTTATACAATTGGTAAAAATAAGTTTATCCCATAG

Protein sequence :
MEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVLLMLHVF
IRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYK
PMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWWS
DYLEACRESYAPPYTIGKNKFIP