PAI Gene Information


Name : sepD (SESS1296_03642)
Accession : AFO66325.1
PAI name : SESS LEE
PAI accession : JQ747523
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : putative LEE-encoded type III secretion system component
Function : -
Note : -
Homologs in the searched genomes :   10 hits    ( 10 protein-level )  
Publication :
    -Chandry,P.S., Gladman,S., Moore,S.C., Seemann,T., Crandall,K.A. and Fegan,N., "A Genomic Island in Salmonella enterica ssp. salamae Provides New Insights on the Genealogy of the Locus of Enterocyte Effacement", PLoS ONE 7 (7), E41615 (2012) PUBMED 22860002 REMARK Publication Status: Online-Only.

    -Gladman,S., Moore,S.C., Seemann,T. and Chandry,P.S., "Direct Submission", Submitted (06-MAR-2012) Division of Food and Nutritional Sciences, CSIRO, 671 Sneydes Road, Werribee, VIC 3030, Australia.


DNA sequence :
ATGAACGATAAGAGCAAACAATGCGATCATAAAACAGACTGGCTGACAGCACTTGATTTTGTAAAAGGAATACAAGGTTC
GTCAACACATCTCAAATTTTTAATCTATGAAAAAAACAGTTTTCTACATGATTTTGGAAATTATTGGGTTCTTTATATTG
AACTTAACGGTGATTTTAGTTTGGTAGCACCAGATGTATTTATCAGACTATGCAGTATTCTTGCGGCAGGGAAAGAATAT
AAACAAACAGGAATTTTTCACTCCAGCAAGAAATGGTATTTGTGCCAAATGTACAGTAAAAATAATCATCATAGAGCAAA
TATCTCCTTAGTTATCATTCAGCACACATTGTCGACATTAATTGATAAACAATTTGTTAAGAGTAATGAAGGAAGGTTAA
CCACGACACAACTTAATGAAAATAATATTTTTTCAAAGATAGGAAAAACAGTGTAA

Protein sequence :
MNDKSKQCDHKTDWLTALDFVKGIQGSSTHLKFLIYEKNSFLHDFGNYWVLYIELNGDFSLVAPDVFIRLCSILAAGKEY
KQTGIFHSSKKWYLCQMYSKNNHHRANISLVIIQHTLSTLIDKQFVKSNEGRLTTTQLNENNIFSKIGKTV