PAI Gene Information


Name : tir (SESS1635_03844)
Accession : AFO66394.1
PAI name : SESS LEE
PAI accession : JQ747540
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : putative translocated intimin receptor protein
Function : -
Note : -
Homologs in the searched genomes :   No hits  
Publication :
    -Chandry,P.S., Gladman,S., Moore,S.C., Seemann,T., Crandall,K.A. and Fegan,N., "A Genomic Island in Salmonella enterica ssp. salamae Provides New Insights on the Genealogy of the Locus of Enterocyte Effacement", PLoS ONE 7 (7), E41615 (2012) PUBMED 22860002 REMARK Publication Status: Online-Only.

    -Gladman,S., Moore,S.C., Seemann,T. and Chandry,P.S., "Direct Submission", Submitted (06-MAR-2012) Division of Food and Nutritional Sciences, CSIRO, 671 Sneydes Road, Werribee, VIC 3030, Australia.


DNA sequence :
ATGCCTATAATTAATGGAAATAACCCTCCTGCTATCCCCGTGGCTCCGCCTCTGCCAAACAGCAACTCTGCATCTTCATT
ACATAATGGGGCCGGGCATGGTCAGCCTCAGCAGACAATAACCAGCTCTGGCGCATTAAATCAGCGGTCAACGCTGACAC
CGCTTTCTCCTGTACCCGGCACTTCCAGTAGTACTGGCAATGTTTCGCACCTCCCGTCCTCGCCACGTAACTTAACCTTA
CCGAGTACCGTTACCTTACACAACGAATTAGAAGTAACGAACGATTGGTCATCACTGAACCTGTTACATAAAGATATTGG
TTCCAGGGGATTTAGGGTTGAGAAAAGTAGCGATGGTACCGTTCATGCTATTGGAGAAAAAGATGGCACAAGTTTTGATC
GCATACTCTCACCCGAAGAAGTCGAAGGCCTGGCAGCAATAGGTTCGGGTAACGATCGATTTGTTTTTAGTGGCAACCGT
GGTGGCGCTGGCCATGTCATGGTCACTGCTGCATCTGATTTTGGTCTTGCGCGCGAAGCCATTGTCAAAAAACTGGACAG
ACAACATACCACTGATGCTGGTACTGATCCGATACCATCTCACAACTCCTCTGGCGCGATGGAGATCGGTACTGACGCGC
AACCATTGCCTGAGTCTTCCAGCCCATTAAAGAGCGACCCCAAACTTTGGGTATCATTAGGTGTCATTACTGCCGGTTTA
GTTGGTTTGGCCGTTACGGGGATAGTTCAGGCAACAGCCTTAACGCCGGCACCGGAAGAACCACAAGATACTGATCCTGA
TGCCGCCGCTGCGAATGCAGAGAAGGCGGCAAGAGACCAGCTCACTCAGGAGGCATACAAGGACCCGAATAATCAGACGG
TTATAATTGATCAGAATGGAAATGCCATGCCTTCAGGTGATCTTAAAGATGATGTTCTGGCAGCCATAGAGCAGCAGGCT
AAAGCTGCCGGAGAAGAAGCAAAGGCCAAAGCGATTGAAGATAATGCCACTGCACAAAGAAACTACACAGAACAGAAAGA
AAAACACGATCGCGAAATGCTTCTATCCTCCGGGATTGGCTACGGAATCAGCTCTGCATTGATTCTGGGGGGAACGGCGG
GATTAGGCACGACGATAGCGCTTCATCACCGGAACAATAACGGCGCTGAGCAACCCCCAATTGAGAATAACTCAAATAGT
TTTCCCATGAATCCTTTTGGTTCAGTTAATAGCGCTAGCCCGGCAGCAGGTCGCTCTGAAGAACCCGACCCCATTTACCA
AAACACGTTGAATGTCAGGAACCCCACCCCTGAGGAAGATCCTTCAGCGCTTTATTCCAGGGTTGTACCCAGGGCTGAAG
ATGTACAATCTCTCTCTGACTCGGAGTCTTTTGATAGCGTTTCCCTGAACTCGGTTCCTGAGGCTATATACGCTGAGCTG
GATCCAACTACATTAGGCGCACCAGGTCTTTCACCCTCCTCAGAACCAACGCTTTACTCAGAGATGCAGCAGAACCCGGA
AAGAGCTAATTTTGATGCAATCAGAAGTCGGATCGAAGGCGTGTTTAGCCGTAACCCCACATCACCTTCTGCAGGAGCAG
CAAGACTAACCGGCCCTGCTAACTTTGTCTAA

Protein sequence :
MPIINGNNPPAIPVAPPLPNSNSASSLHNGAGHGQPQQTITSSGALNQRSTLTPLSPVPGTSSSTGNVSHLPSSPRNLTL
PSTVTLHNELEVTNDWSSLNLLHKDIGSRGFRVEKSSDGTVHAIGEKDGTSFDRILSPEEVEGLAAIGSGNDRFVFSGNR
GGAGHVMVTAASDFGLAREAIVKKLDRQHTTDAGTDPIPSHNSSGAMEIGTDAQPLPESSSPLKSDPKLWVSLGVITAGL
VGLAVTGIVQATALTPAPEEPQDTDPDAAAANAEKAARDQLTQEAYKDPNNQTVIIDQNGNAMPSGDLKDDVLAAIEQQA
KAAGEEAKAKAIEDNATAQRNYTEQKEKHDREMLLSSGIGYGISSALILGGTAGLGTTIALHHRNNNGAEQPPIENNSNS
FPMNPFGSVNSASPAAGRSEEPDPIYQNTLNVRNPTPEEDPSALYSRVVPRAEDVQSLSDSESFDSVSLNSVPEAIYAEL
DPTTLGAPGLSPSSEPTLYSEMQQNPERANFDAIRSRIEGVFSRNPTSPSAGAARLTGPANFV