PAI Gene Information


Name : tcdC
Accession : CAA63565.1
PAI name : PaLoc
PAI accession : X92982
Strain : Clostridium difficile 2007855
Virulence or Resistance: Virulence
Product : -
Function : -
Note : -
Homologs in the searched genomes :   4 hits    ( 4 protein-level )  
Publication :
    -Hundsberger,T., Braun,V., Weidmann,M., Leukel,P., Sauerborn,M. and von Eichel-Streiber,C., "Transcription analysis of the genes tcdA-E of the pathogenicity locus of Clostridium difficile", Eur. J. Biochem. 244 (3), 735-742 (1997) PUBMED 9108241.

    -von Eichel-Streiber,C., "Direct Submission", Submitted (13-NOV-1995) C. Von Eichel-Streiber, Inst. fr Medizinische Mikrobiologie, AG von Eichel, Hochhaus am Augustusplatz, D- 55101 Mainz, FRG.


DNA sequence :
ATGTTTTCTAAAAAAAATGAGGGTAACGAATTTAGTAATGAAGGAAAAGGAAGCTCTAAGAAAATAATTAAATTCTTTAA
GAGCACAAAGGGTATTGCTCTACTGGCATTTATTTTAGGCGTGTTTTTTGGCAATATATCCTCACCAGCTTGTTCTGAAG
ACCATGAGGAGGTCATTTCTAACCAAACATCAGTTATAGATTCTCAAAAAACAGAAATAGAAACTTTAAATAGCAAATTG
TCTGATGCTGAACCATGGTTCAAAATGAAAGACGACGAAAAGAAAGCTATTGAAGCTGAAAATCAACGTAAAGCTGAAGA
AGCTAAAAAAGCTGAAGAAGCTAAAAAGGCTGAAGAACAACGCAAAAAAGAAGAAGAGGAGAAGAAAGGATATGATACTG
GTATTACTTATGACCAATTAGCTAGAACACCTGATGATTATAGTACAAAAGGTAAATTTGAAGGTAAGGTTATTCAAGTT
ATTGAAGATGGTGATGAGGTGCAAATAAGATTAGCTGTGTCTGGAAATTATGATAAGGTTGTACTATGTAGTTATAAAAA
ATCAATAACTCCTTCAAGAGTATTAGAGGATGATTACATAACTATAAGAGGTATAAGTGCTGGAACTATAACTTATGAAT
CAACTATGGGTGGAAATATAACTATACCAGGGATAGCTGTAGAGAAAATTAATTAA

Protein sequence :
MFSKKNEGNEFSNEGKGSSKKIIKFFKSTKGIALLAFILGVFFGNISSPACSEDHEEVISNQTSVIDSQKTEIETLNSKL
SDAEPWFKMKDDEKKAIEAENQRKAEEAKKAEEAKKAEEQRKKEEEEKKGYDTGITYDQLARTPDDYSTKGKFEGKVIQV
IEDGDEVQIRLAVSGNYDKVVLCSYKKSITPSRVLEDDYITIRGISAGTITYESTMGGNITIPGIAVEKIN