Name : i-inlB2
Accession : CAC81246.1
PAI name : LIPI-2
PAI accession : AJ271621
Strain : Listeria ivanovii PAM 55
Virulence or Resistance: Virulence
Product : internalin B, i-InlB2 protein
Function : -
Note : -
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Dominguez-Bernal,G., "Direct Submission", Submitted (28-JAN-2000) Dominguez-Bernal G., Patologia Animal I Grupo de Patogenesis Molecular Bacteriana, Facultad de Veterinaria Universidad Complutense de Madrid, Avda Puerta de Hierro s/n, 28040 Madrid, SPAIN.
-Dominguez-Bernal,G., Muller-Altrock,S., Gonzalez-Zorn,B., Scortti,M., Herrmann,P., Monzo,H.J., Lacharme,L., Kreft,J. and Vazquez-Boland,J.A., "A spontaneous genomic deletion in Listeria ivanovii identifies LIPI-2, a species-specific pathogenicity island encoding sphingomyelinase and numerous internalins", Mol. Microbiol. 59 (2), 415-432 (2006) PUBMED 16390439.
| DNA sequence : |  |
TTGAAAAGAAATAGTAGTTTAAAAAAAGTATTACCAGTGTTATTAATAACCATTATTGCTATGTGTATGAACACAAACTT
GGAGATAAAGGTGCAAGCTGCGAGTATTTCCAATCCTATGCCTATTAATCAAATATTCCCAGATACGAACTTAGCAGAAG
TAATGAAATGGTCATTAAGAAAAAATAGCGTAACAGACGTAGTTTCCCAACAGGAACTAGATCAAGTAGAAAGTATTAAT
GCTATGAGAAAGAATATAAAATCTATTCAAGGACTGCAGCACTTGTCGAACTTACAAACTATATATTTGAGCGATAATCA
AATTCAAGATATCAGTTACCTTACCAATTTAAACAAACTGGAAGAAATTTACTTGAGCGGTAATCAAATCAAAGATATCG
GTCATCTTGCTAATTTAAACAAACTGGAAAAAATTTTCTTGCAAGGTAATCAATTAACTGATATTAATTTACCAGCTGGT
TTATCTAATTTAAAAACACTAGTTTTAAGCAATAATCAAATTAAAGATATCTGTAATCTTGAAAAATCAAAAAAACTGGA
AAATGTATACTTGCAAGGTAATCAATTAACTGATATCAGCATAGCTGGTTTATCCAACTTAAATATCCTTGATTTGAGTA
ACAATCAAATCAAAGGTATCAATCAACTTGCTAATTTAAATAAACTGAATGAATTATATTTGGAAGGTAATCAATTAACT
GATATTAGTGTACTAGCTGGTCTATCCAATTTAAAAACACTGGATTTGAACAATAACCGAATCAAAGATATACGTACATT
ATCCACTTTAGTTAACCTAGAAAATTTATTAATGAATAACAATCAACTAATCAATATAAATCATTTATCAAGTTTACTTA
AACTCAAACTTTTATCTTTTAATGGAAATCGAGTAACTGATATAAGTTCAGTAGCGAAATTAACCAATTTAACTGAATTA
GATTGTAGTGAAAACCAAGTAGATAATATAAATTCACTAGCAAAACTAACCAATTTAACTGGATTAACATTGGAAGGGAA
TAAGGTGAAAGATCTAAGCCCATTGGCCCAATTAACTAATTTAACTGGTTTAAATTTTAGACAAAATCAAATAAACGATA
TCAGTATATTGGAGAAATTGCCAAATTTAGATAGTTTAGCCTTTGATAAGAATAAAGTGAGTGATGTAAGTATATTAGCA
AAGTTACCTAAGTTAACCTACTTAATTTTTAATGACAATCAGGTAACGAATATCGATTCATTAGCAAAATTACCTCATTT
AGTTGGAGTGGATTTTAGTGGCAATAAGGTAAGTAATATAAAGGCATTAACCAATTTAACTAAGTTAAGATTTCTAAATG
CAAATGGTAACTGCATACAAGATATCCAAGCTTTACGGGGGTTAACACAACTGGAAGAGTTAAAGTTAGCTCGTAACCGC
ATTATGGATATAAGTCCATTAATCTGGTTAAATAATATTGATGAATTAGATTTGTCCAACCAAGCATTTATAAATCGTCC
TATCGATTTTCAAGTGAATGTAACTATTCCTAATATAGTCAAAGATATAACAGGAACATTGATAGCACCAAATTCTAGTA
GTGACAAAGTAACCTATAACCCACCTAACCTCACTTGGAATTTGCCTACGTATAAGAAAGAAGTATGCTATACCTTTAAT
CAATCTGTTATGCTAGGGCAAGCTACTTCCCAATTTAGCGGTCAAGTAATCCAACCATTTAATAAGCTGGATGTAGTGAA
ATCGAATAAAGCCATCACTGCATATGGTCGTGTGAAACCAGGAAAAACAAGCACGGTGTGGACGCAGCCCTGTCGTACAA
AGGACACTAAACAGGTAGGAATGGTGTCAGCCTATACTGGTAAGAATTTACGCATCTTACGAGAAGCACAAACAACTAGT
GGCATTTACTATCAATTTAGTGTAGGTGGAAAAACGATTGGTTGGGTAGAAGCTCAAGCGCTAGGGATTTTCTATCAATC
TAGCATGGAGAAAAAAGCGACAGGAGCTCGCTATACTGTTCGTGGAAAAGAAGGCCAACACTTTTATAAGCTTCCAGTAA
TCGATGCCGCTATTGATGGAGGAACACTTGCTAAATGGAAAGGGAAAAGACTTATCATACAACGCGAAGTCACCATTGGA
AAAGAAAAGTGGCTACTACTTCAAGGCGTTGGCTGGGTAAAAGCTACTAATCTGACCACCGTGCTTTACAATAAACCTAT
GACTGGCTATGCGAAAGTAAAACTAGCTAAGGGAAAAGTAGTGTGGTCCAATCCATATAATATTACTGGCTACAAAGTGG
TAGCTTCTTTATCGCGCTACACCGGTAAAAATTTACGCATTTTACGAGAAGCACAAACAAGCAATGGCTTATACTACCAA
GTGAGAGTAGGCAAAAAAACGATTGGCTGGGTAGAGGCTAAAAATGTCGCTGTTTTCTATAAACCAATTATGGAGAAAAA
ATATAAAGGCACTCGTTTTGTGAAAGTAAGAAAGAAAAACCAAGCTTATTACAGTATGCCAGTGGCGGATGCAGCCATTA
GTCGTGGGAAGCTCCAAAAATTTGGTCGTAAAAGAGTAACCATTGACCGAAAAGCAACTATTCAAGGCCAACAATGGTAC
CGAATCAAAGGAGCTGGCTGGACAAAAGCAGTGAACCTAAGTACGAGAAGATAA
|
| Protein sequence : | |
MKRNSSLKKVLPVLLITIIAMCMNTNLEIKVQAASISNPMPINQIFPDTNLAEVMKWSLRKNSVTDVVSQQELDQVESIN
AMRKNIKSIQGLQHLSNLQTIYLSDNQIQDISYLTNLNKLEEIYLSGNQIKDIGHLANLNKLEKIFLQGNQLTDINLPAG
LSNLKTLVLSNNQIKDICNLEKSKKLENVYLQGNQLTDISIAGLSNLNILDLSNNQIKGINQLANLNKLNELYLEGNQLT
DISVLAGLSNLKTLDLNNNRIKDIRTLSTLVNLENLLMNNNQLININHLSSLLKLKLLSFNGNRVTDISSVAKLTNLTEL
DCSENQVDNINSLAKLTNLTGLTLEGNKVKDLSPLAQLTNLTGLNFRQNQINDISILEKLPNLDSLAFDKNKVSDVSILA
KLPKLTYLIFNDNQVTNIDSLAKLPHLVGVDFSGNKVSNIKALTNLTKLRFLNANGNCIQDIQALRGLTQLEELKLARNR
IMDISPLIWLNNIDELDLSNQAFINRPIDFQVNVTIPNIVKDITGTLIAPNSSSDKVTYNPPNLTWNLPTYKKEVCYTFN
QSVMLGQATSQFSGQVIQPFNKLDVVKSNKAITAYGRVKPGKTSTVWTQPCRTKDTKQVGMVSAYTGKNLRILREAQTTS
GIYYQFSVGGKTIGWVEAQALGIFYQSSMEKKATGARYTVRGKEGQHFYKLPVIDAAIDGGTLAKWKGKRLIIQREVTIG
KEKWLLLQGVGWVKATNLTTVLYNKPMTGYAKVKLAKGKVVWSNPYNITGYKVVASLSRYTGKNLRILREAQTSNGLYYQ
VRVGKKTIGWVEAKNVAVFYKPIMEKKYKGTRFVKVRKKNQAYYSMPVADAAISRGKLQKFGRKRVTIDRKATIQGQQWY
RIKGAGWTKAVNLSTRR
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