PAI Gene Information


Name : unnamed
Accession : CAI43823.1
PAI name : LEE
PAI accession : AJ303141
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : orf20
Homologs in the searched genomes :   No hits  
Publication :
    -Jores,J., "Direct Submission", Submitted (02-JAN-2001) Jores J., Institut fuer Mikrobiologie und Tierseuchen, Freie Universitaet Berlin, Philippstrasse 13, 10115 Berlin, Berlin, 10115, GERMANY REMARK revised by [3].

    -Jores,J., "Direct Submission", Submitted (09-SEP-2004) Jores J., Institut fuer Mikrobiologie und Tierseuchen, Freie Universitaet Berlin, Philippstrasse 13, 10115 Berlin, Berlin, 10115, GERMANY.

    -Jores,J., Rumer,L., Kiessling,S., Kaper,J.B. and Wieler,L.H., "A novel locus of enterocyte effacement (LEE) pathogenicity island inserted at pheV in bovine Shiga toxin-producing Escherichia coli strain O103:H2", FEMS Microbiol. Lett. 204 (1), 75-79 (2001) PUBMED 11682182.

    -Jores,J., Wagner,S., Rumer,L., Eichberg,J., Laturnus,C., Kirsch,P., Schierack,P., Tschape,H. and Wieler,L.H., "Description of a 111-kb pathogenicity island (PAI) encoding various virulence features in the enterohemorrhagic E. coli (EHEC) strain RW1374 (O103:H2) and detection of a similar PAI in other EHEC strains of serotype 0103:H2", Int. J. Med. Microbiol. 294 (7), 417-425 (2005) PUBMED 15715170.

    -Rumer,L., Jores,J., Kirsch,P., Cavignac,Y., Zehmke,K. and Wieler,L.H., "Dissemination of pheU- and pheV-located genomic islands among enteropathogenic (EPEC) and enterohemorrhagic (EHEC) E. coli and their possible role in the horizontal transfer of the locus of enterocyte effacement (LEE)", Int. J. Med. Microbiol. 292 (7-8), 463-475 (2003) PUBMED 12635929.


DNA sequence :
ATGAATATTCGTATCCGGAGTGGTATGCTCCCCTGTATGGATATCTCCGCTCTCAACACCACGAATGACATCGAAAAACT
GCGTGCTATGGCACTTGCCATGGTACAAAAAGTCATGTCGGAGAATGCCGAAAAAGAGCGGGAATTACTGGAGAAAAGCC
GGCGCATCCAGCTTCTGGAAGAAATGCTGAAACTGGTTCGTCAACAGCGCTTCGGTAAAAAATGTGAAACGCTGGCTGGT
ATGCAACGCTCCCTGTTCGAAGAGGATGTTGATGTCGATATCGCCGAGCTCACCGCACATCTGGATAAACTGCTCCCGCA
ATCCCCTGAAGAAGACGAAAAAGCGTCCCGTTCACGCCCGATACGCAAACCCTTACCGGCTCATCTTCCACGGGTGGAAA
AAATTATCCAGCCGGACACTGACCATTGCCCTGAATGTGACGAGCCGCTGCACTATATCCGTGATGCGGTGAGTGAAAAG
CTGGAGTATATTCCCGCTCACTTTGTGGTGAACTGTTATGTCCGTCCGCAATACAGTTGTCCCTGTTGCCAGAAGGTGTT
CAGCGGTGAAATGCCGGCACATATCCTCCCGAAAAGTGCCGTTGAGCCATCAGTCATCGCACAGGTGATCATCAATAAAT
ACGGTGAGCACCTGCCTCTGTATCGCCAGCAACAGGTCTTTGCCCGTTCAGATGTCGGACTGCCCGTCAGTTCGATGGCT
GACATGGTTGGCGCGGCAGGGGCCGCATTATCCCCCCTCGCGGCGTTACTCCATCGCGAATTGATAAGCCGTCCGGTGGT
GCATGCAGATGAGACTACCCTGAAGATCCTGAACACGAAGAAAGGCGGTAAATCCTGCTCCGGTTATCTGTGGGCATACG
TCAGTGGAGAAAGGACGGGACCGTCAGTTGTGTGCTTCGACTGCCGGACCGGACGTAGCCATGAGTATCCTGAAAACTGG
CTTCAGGGCTGGGGCGGGACGCTGGTTGTCGACGGACATAAAGCTTACCGGACTCTGGCAAACAAAGTGCCGGAGCTGGC
GAATATCATCGGTCATCACGCGGGTATTGATGACAATACAGCGGCAAAAGCCATTGCCCATGCCATTCTCGGTGGTGTGA
CAGCAGCCCTTCAGGGCAACAGTGCGGCAGCAGGCGCAATTGGTGCGGGTACTGGTGAAGTGATCTCGTCAGCCATTGCG
AAAAGCCTCTACCCGGACGTAGATCCGTCGAAACTGACAGAAGATCAGAAGCAAACCGTAAGCACGCTGGCAACGCTGTC
AGCGGGTATGGCTGGCGGCATTGCCAGTGGCGATGTGGCTGGCACAGCTGCAGGGGCTGGTGTTGGGAAGAACATTGCTG
AGAATAACTTGGTTGGTGGCACAGAGTCCGAGCAGAGCAAAGCTGCTCAGACGCATGGCGCAGATGTACTTTCCTGTAAC
GATGCTCCAGGCGGTGAAGCCTGTAAGCGAGGAGAAGCAGTCAATAAAGCGTATGCCGGAGCGTTGGCCACTGGTAGTGT
AGCTCTCTTACCTGGCGGTGCTCAGGCCATGTGGGCTCTTGGCACAGGTGCAAATGCAGGAATTGGTTACATGGTAGATA
GTTCAGTTGATCCTGAAAATGCAATCATTGCAGGATGGGTCAATGTAATCACCATGGGGCAGGGCTGGAAAGGAACCGTT
GGGTGGAATGCGGCAGGTGGTGCGCTGGGTAACTGGATTGACGACAAAGATCCATTGTCAGGTGCCCTTATCAATGGTAC
CGGTTCGGGTATTGGTTATGGAGTTGGCAAAGGACTTTCATGGGGTGTTAATGCAGGGGAAAACTGGTGGAAAGGTGGTT
GGGATCCGAAGTTTAATTCTGAGTTGAGAAGTGTTACTAAAGTTAAAGGGGATTATGGTCTTTCAAAAGAAATGAAACCA
AGCAAAGTTCCTAGCTCATTTGGTGACGTAGGTGGTTCTGCTTTCTCCGAAATAACAGGAAAAGGAATCGAAAAAATTTC
GTCTTCAAATGCTAATGGAGATAAGAAATGA

Protein sequence :
MNIRIRSGMLPCMDISALNTTNDIEKLRAMALAMVQKVMSENAEKERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAG
MQRSLFEEDVDVDIAELTAHLDKLLPQSPEEDEKASRSRPIRKPLPAHLPRVEKIIQPDTDHCPECDEPLHYIRDAVSEK
LEYIPAHFVVNCYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGEHLPLYRQQQVFARSDVGLPVSSMA
DMVGAAGAALSPLAALLHRELISRPVVHADETTLKILNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENW
LQGWGGTLVVDGHKAYRTLANKVPELANIIGHHAGIDDNTAAKAIAHAILGGVTAALQGNSAAAGAIGAGTGEVISSAIA
KSLYPDVDPSKLTEDQKQTVSTLATLSAGMAGGIASGDVAGTAAGAGVGKNIAENNLVGGTESEQSKAAQTHGADVLSCN
DAPGGEACKRGEAVNKAYAGALATGSVALLPGGAQAMWALGTGANAGIGYMVDSSVDPENAIIAGWVNVITMGQGWKGTV
GWNAAGGALGNWIDDKDPLSGALINGTGSGIGYGVGKGLSWGVNAGENWWKGGWDPKFNSELRSVTKVKGDYGLSKEMKP
SKVPSSFGDVGGSAFSEITGKGIEKISSSNANGDKK