PAI Gene Information


Name : STY0304
Accession : NP_454884.1
PAI name : SPI-6
PAI accession : NC_003198_P1
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : conserved hypothetical protein
Function : -
Note : Similar in C-terminus to Vibrio cholerae Z29F protein z29F TR:O87035 (EMBL:AJ231091) (105 aa) fasta scores: E(): 1.4e-12, 41.4% id in 99 aa
Homologs in the searched genomes :   88 hits    ( 88 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
ATGAGCTGGAATGACCGCGTAGTCTGGAGTGAAGGACAATTTTTACTGCCGCAGATGTTTCAGCAGCAAGAGCGTTATCT
GGAACACGTCATGCATTACCGCAGCCTGCCGCTGACTCCCTTTTTCTGGGGATTCAGCCACTACAATATTGATGGCGAAG
CGCTGAACATCGGTAAACTGATACTGAAAGAGGCATCAGGGATTTTTCCTGACGGCACGCCGTTTAACGCACCGGACCAC
ACCCCGCTGCCGCCGCCGCTGACCATCCTGCCGGAGCACCTGAACCAGCAGATTTGTCTGGCGGTACCGGTACGCGCGCC
GAACAGCGAAGAAACCACGTTTGACAATAACCCGGAATCACTGGCGCGTTTCTCGGTACATGAACACGACATCCGCGACG
CCAACTCGCTGGGACGTGGCGCGCAGTTATTACAGCTCACTCATCTGCGCCTGCGGCTGCTGCCGGAAAAGGCGGTGACG
GGCGCCTGGATTGGCCTGCCGTTGACCCGCATCACCGGGTTGAACCCTGACGGGCGGATAGATATCGACCACGACCTGAT
CCCGCCCATCATTAATTATCAGGCCAGTTCACTGATGTGTACCTGGCTGTCGTGGATCAACGATCTCATCCGGATGCGGG
CCGATTCGCTGGCGGAACGGCTGACCGGCAGCGACAACCACGGCCATGAAGCAGCGGAGGTCTCCGATTACCTGCTGCTG
CAAATTCTCAATCGCTTTGAGCCGCTGCTGACTCACCTGGCGAAAACCCCGCTGGCCCCGGAAGTGTTGTATCGCTACCT
GTCCGAACTGGCCGGGGAACTCTCCACCTATGTGCGTCCACAAACGCGACGGCCCGCTGAATACAAAGAGTACAAACACC
TGACGCCCTATGCCGGGTTGAAATCGCTGGTTGATGAGGTGCAGTTCCTGCTGAACGCGGTACTGATCCGGGGCGCGCAG
CGCATCGAGCTGAAAGAGGGGACTTACGGTATCCTGAATGCGGTGGTGGCCCCTTCCGATCTTGCCGATTTCAGCACGCT
GGTACTGGCGATAAAGGCTTCAATGCCGACCGATGTGCTACTGCAACATTTTGCCGCCCAGACCAAAATCGGGCCATCCG
ATCGCCTGCCGGAACTGATCCGCTCGCATCTGCCGGGGCTGGCTTTGCAGGTTCTGCCTGTACCACCGCGCCAAATCCCG
TTTCAGGCCGGATACATCTATTACGACATCCGCCGCGAGGGAGCATTGTGGGAACACATTGCCCGTTACGGCGGGATGGC
CATGCATACCGCCGGGGAATTTCCGGGGCTGGAGACAGAACTGTGGGGAGTGCGCGATAAATGA

Protein sequence :
MSWNDRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKLILKEASGIFPDGTPFNAPDH
TPLPPPLTILPEHLNQQICLAVPVRAPNSEETTFDNNPESLARFSVHEHDIRDANSLGRGAQLLQLTHLRLRLLPEKAVT
GAWIGLPLTRITGLNPDGRIDIDHDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLL
QILNRFEPLLTHLAKTPLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGLKSLVDEVQFLLNAVLIRGAQ
RIELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVLLQHFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIP
FQAGYIYYDIRREGALWEHIARYGGMAMHTAGEFPGLETELWGVRDK