PAI Gene Information


Name : STY0338
Accession : NP_454909.1
PAI name : SPI-6
PAI accession : NC_003198_P1
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : conserved hypothetical protein
Function : -
Note : Similar to Escherichia coli ShF TR:Q9X692 (EMBL:AF134403) (280 aa) fasta scores: E(): 0, 63.7% id in 267 aa, and to Shigella flexneri Shf1 TR:P72436 (EMBL:U61977) (132 aa) fasta scores: E(): 4.3e-29, 61.0% id in 118 aa
Homologs in the searched genomes :   81 hits    ( 81 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
ATGTCTTATGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCCG
TACGTTCCGGGCGCAGATGAAATGGCTGGCTGAATCTGGCTGGAAAACCGTTACTGCTGCAGCGGTGGAAGCTTTTTATC
ATGGTGCAAGATTGCCTCGTAAAAGCGTCATGCTGACTTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCG
GTGCTGCAGGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTTCGTATTCCTGC
AGGCGAACCGGTGTACTCTCATGATGAGTGTCAGATGCTGGTTAAACAAGGCCGGGTTGATGAGGTCATGCTGCGCTGGT
CAGAGGTCCGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCATTCGCACACGCACACCCACCGACGCTGGGACCAGAAG
CCTGTGTCCCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTA
CTGCAGTCAGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGATTATATTCATGTGGCTGAAGAGCTGGGGTTCACAT
ACCTGTATACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACACAAAGGAGCGA
AAGAATGTGGGCTGGCTGAAACGTCGCCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGG
GGCACGTCGGATAGCTGACTGA

Protein sequence :
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD