Name : tcfD
Accession : NP_454915.1
PAI name : SPI-6
PAI accession : NC_003198_P1
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : putative fimbrail protein
Function : -
Note : Previously sequenced Salmonella typhi, and Salmonella enterica TsaD or TcfD TR:Q9XDS1 (EMBL:AB029403) (359 aa) fasta scores: E(): 0, 100.0% id in 359 aa and to Escherichia coli cfa/i fimbrial subunit E CfaE SW:CFAE_ECOLI (P25734) (360 aa) fasta scores: E(
Homologs in the searched genomes : 13 hits ( 12 protein-level, 1 DNA-level )
Publication :
-Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.
-Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAGTAATAAAATGAAGTGGACGAGTATGACAGCCCATTGGTCAGCAATTATTAATTTCATCCGAAAATATGTTTATCC
AGCAAGGATAATTGCCATCCTGCTGATGGCTGGCGCTACACTGCCACAAGTCGCCGATGCGATTACCGTCGACCTGAATT
ACGACAAGAACAATGTAGCGGTCATCACTCCTGTCTGGTCCCAAGAATGGAGTGTAGCAAATGTGTTGGGGGGATGGGTA
TGTCGTTCAAACAGGAATGAAAATGAGGGGGCGTGTGAAGAAACACATTTGGTATGGTGGTATGCTTTTGGAGCTTATTC
AAAAATTCGTCTGCGTTTCAGAGAACAAATCAGCCATGCTGAAATCACGCTCATACTGCTCGGCAGTGTTCGTGATGCCT
GTTATACTGGTGTCATCAACATGAACGCTGCTGCATGTCAATGGGGTAGGTCGCTGAAACTTAGGATACCTTCAGAAGAG
CTTGCGAAGATACCTACAAGCGGAACATGGAAAGCAACGTTAGTCCTGGATTATTTACAATGGGGCGGAGACGATCCTTT
AGGCACATCAACTACAGATATCACGCTGAATGTAACAGACCACTTTGCTGAAAATGCGGCTATTTACTTTCCGCAATTTG
GTACAGCAACGCCCCGGGTGGACCTGAATCTTCACCGGATGAATGCCTCACAAATGTCGGGCAGGGCTAATCTGGATATG
TGTCTGTATGACGGAGGTGTGAAAGCCCGTTCATTACAGATGAAGATAGAAGGAAGCAATAAGTCAGGTACGGGATTTCA
GGTTATAAAGAGCGATTCTGCTGATACGATTGATTATGCGGTCAGTATGAATTATGGGGGACGAAGTATTCCTGTCACCC
GTGGCGTGGAGTTCAGTCTGGATAACGTGGATAAAGCAGCAACGCGTCCGGTGGTACTTCCCGGGCAACGGCAGGCGGTA
CGTTGTGTGCCAGTGCCCCTTACCCTGACAACACAACCCTTTAACATCAGAGAGAAGCGTTCTGGTGAGTATCAGGGAAC
GCTGACAGTGACAATGCTGATGGGAACACAAACCCCCTGA
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| Protein sequence : | |
MSNKMKWTSMTAHWSAIINFIRKYVYPARIIAILLMAGATLPQVADAITVDLNYDKNNVAVITPVWSQEWSVANVLGGWV
CRSNRNENEGACEETHLVWWYAFGAYSKIRLRFREQISHAEITLILLGSVRDACYTGVINMNAAACQWGRSLKLRIPSEE
LAKIPTSGTWKATLVLDYLQWGGDDPLGTSTTDITLNVTDHFAENAAIYFPQFGTATPRVDLNLHRMNASQMSGRANLDM
CLYDGGVKARSLQMKIEGSNKSGTGFQVIKSDSADTIDYAVSMNYGGRSIPVTRGVEFSLDNVDKAATRPVVLPGQRQAV
RCVPVPLTLTTQPFNIREKRSGEYQGTLTVTMLMGTQTP
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