PAI Gene Information


Name : STY4827
Accession : NP_458905.1
PAI name : SPI-10
PAI accession : NC_003198_P10
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Not determined
Product : putative phage capsid protein
Function : -
Note : Probable phage capsid glycoportein. Identity in C-terminus to Bacteriophage P4 glycoprotein 3 Sid SW:VSID_BPP4 (P05461) (244 aa) fasta scores: E(): 2e-13, 29.0% id in 224 aa. Note the presence of alternative possible translational start sites.
Homologs in the searched genomes :   11 hits    ( 11 protein-level )  
Publication :
    -Parkhill,J., "Direct Submission", Submitted (25-OCT-2001) Submitted on behalf of the Salmonalla sequencing team, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18", Nature 413 (6858), 848-852 (2001) PUBMED 11677608.

    -Parkhill,J., Dougan,G., James,K.D., Thomson,N.R., Pickard,D., Wain,J., Churcher,C., Mungall,K.L., Bentley,S.D., Holden,M.T., Sebaihia,M., Baker,S., Basham,D., Brooks,K., Chillingworth,T., Connerton,P., Cronin,A., Davis,P., Davies,R.M., Dowd,L., White,N., , "Direct Submission", Submitted (10-SEP-2013) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
GTGGCCAGCCGGTTTTTAAGGTCTGTTTGTGCCAGCACTCTGACAACGGCAATGAATCGTGTTGTTGTGCAGGAGGCGTC
AGAATCATTTCAGGTTGAACACACGGAGAGCCTGAACATGAAACCCGAACTCATTATCAAATCCATGCAGACCGTTATCA
GTAAACAGGATGAAGGCGCGGAACAACGCATTGCCGGTGCGCTGGTCGCACTTAACGAAGCAAAAGACGCACACACGGCC
AGCATGGGTAAACTCAGCGACATTGAGGCTTCCATTCAGCGTTGTGAGCAGGAACGACAGACCGCCCTCAGTGAAAGTGC
ACAGGCCGAACAGGACTGGCGCAGCCGCTTTCGAACTCTGCGCGGCAACCTCACTCCTGAACTGAAAGCTGAACACAGTA
AACGTATCGCCAGCCGCGAACTGGCTGATGAGTTCACCGGTCTGATTACCGAGCTGGAGAAAGACAAAAGCCTCGCCATG
CTTGGTGCATGCTCCTCCGGTACGGCTTATATCAGCGCCCATGAAAAAGCGTTCACTACCTACGCCAACAGCGAGTGGAA
GAAGGCGTTAGCCGGTATCAGCCCCGCACTGTTACGTGCCTTTCTGTTGCGTATTCGGTCGCTGGAAATGAGCGGAGAAA
CCTCGCTGCGTGCGACCGTGACCCGTGAGCTGGGTGATGCCCTGAATATGCAGTCAGCCCTGTATCATTTTGATATGGAG
CAGGAGCCGGTTCTGTCCGTAACGGGCATGAATCGCCCGGTCATAACCGGGGTTGATATGGCGCTGTTAAGAAGCCCGGC
CAGACGGATGAAGCTTGCCGCTGAACTGGCCGCAAAAGACCACGAACAGGCAGAGGGCTGA

Protein sequence :
MASRFLRSVCASTLTTAMNRVVVQEASESFQVEHTESLNMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTA
SMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAM
LGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDME
QEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG