Name : SSU05_0962 (SSU05_0962)
Accession : YP_001198328.1
PAI name : 89K
PAI accession : NC_009442_P1
Strain : Streptococcus suis 05ZYH33
Virulence or Resistance: Not determined
Product : SNF2 family protein
Function : -
Note : -
Homologs in the searched genomes : 24 hits ( 24 protein-level )
Publication :
-Chen,C., Tang,J., Dong,W., Wang,C., Feng,Y., Wang,J., Zheng,F., Pan,X., Liu,D., Li,M., Song,Y., Zhu,X., Sun,H., Feng,T., Guo,Z., Ju,A., Ge,J., Dong,Y., Sun,W., Jiang,Y., Wang,J., Yan,J., Yang,H., Wang,X., Gao,G.F., Yang,R., Wang,J. and Yu,J. CONSRTM BGI, "A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates", PLoS ONE 2 (3), E315 (2007) PUBMED 17375201 REMARK Publication Status: Online-Only.
-Chen,C., Tang,J., Dong,W., Wang,C., Feng,Y., Wang,J., Zheng,F., Pan,X., Liu,D., Li,M., Song,Y., Zhu,X., Sun,H., Feng,T., Guo,Z., Ju,A., Ge,J., Dong,Y., Sun,W., Jiang,Y., Wang,J., Yan,J., Yang,H., Wang,X., Gao,G.F., Yang,R., Wang,J. and Yu,J. CONSRTM BGI, "Direct Submission", Submitted (08-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Chen,C., Tang,J., Dong,W., Wang,J., Wang,C., Pan,X., Zheng,F., Song,Y., Dong,Y., Zhu,X., Sun,H., Feng,T., Guo,Z., Ju,A., Ge,J., Wang,J., Wang,X., Gao,G.F., Yang,H., Yang,R., Wang,J. and Yu,J., "Direct Submission", Submitted (27-JUN-2006) Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 101300, China.
| DNA sequence : |  |
ATGAATCAAGAAGTCTTACTACAAATGATGAGAGCAACCATTCCTCGTGATAGAGCCTTGCTTGAAGCGTTTTTATATTA
CCAAGCAGAGCATTTTGATGAGGAGTGGGATAGTCTCGTTTATCAGTTTATGACCAATAGGCAGGGAATCAAAAGATCTG
TTCAGGTACTTCACTTTGAGACAGATGTTTCAGCTTTTGTCCAGGCTAGTCCTTATGATACTGCTCATGATCTATTGACC
TATACACAAGTTTTCGGCCAAACTGGTCTCCAAAAACTCGACAAACTATCGCCGTCTGAAAAAGACTTGGTGATTGAAGT
GGCCTTGTTCAATCTGGCCACTCGTTTTCAACTATTAGACTCAAATGGACACTACCAAACTATTTCACCAGATTCTCTAT
TACAAAAGAGTAGGGGAGCTAATTTGGTCAATGTTTATCGTGTGGCAAATAATTTAGCGGATCGGATTAGTCGAGATATT
GAACAGTTTCTCTTAACTTACGAGCCTGAGCTTGAAATAAAAGTAGATGAAACAGTTCTAGAAAATGAAGAAACTGGTGA
TGAGCACAAAGCTAGTGTTCATCAAGCAATATCATTTAGAGAAGATGGCTCTCTCATCATTGCTAGTTTGGATGTAGATT
TGTCTCAACTAGATGTTCAAACAGGAAAAACAAGTCATCTGCCAGCTTATGAAGCGTTATCTTTACGACGTAAATTTGAG
ATTCTAACATATTTTGACCAAATTCGAAATGAACGTTCCAAAGTCCCAAGTTTTAGACGAGGTGATTTTGATACTGAGAC
GGAAATGACACCAGTCTTTGAGGGCGAGGAGTTACTTACCTATCTAGAAGCTGATGGCACTCCCTATGAGCTGAAACGAA
CGCTGACCACAGTCGAAGAAAAGGAATTAGAAAAAATTGGACAAGCCATTTGGATAGAAAATCAAGAAAAATTGACTCAG
CTAGGGATTGAGCTATCTCAGTTTGAATCAGACCAAGTCGGTATTTTATTGGATGCGGCAGGTCGTTTTCGTTTGAAAAA
TGCGGACCTTGCTTTACTAGGTGGCTATCCCAAAGCCTCGGTAACTCAACTAGCCCTTGCGACAGAACTACTCCAAATGG
GATTGAGTCATGAAAAGGTTGAATTTTTCTTTGGTAGCCAGCTTTCCATTGAAGAGCTGCGACAAGTTGCCTACGCCTTT
TTACACCAAGAACTCAGCAGAGAAGATGCGGAGCAATTTGAAAAAGATAAACGCAATCAGCCAGATTTAACCCTCAGAGA
TTGGAAAAGCAAGCTAGAGAAAGCTGAGTCGAAAGTAGTAGTTGATGAAGAATTCGCGGAAAATCCACTAGTCCAGAGAG
TATTGGACACTTATCCTCTGGGGTCATTGGTTTCCTATAAGGGACAGGACTTTGAGGTCGTGTCGGTCAGCGATGCTCGA
TTGAACGGTTTGATTCGGATTGAGTTAGTCAATGATTTTTCGGATATCATTGAACAAAATCCAGTTCTTTATATGAGGAC
CTGGGAAGAAGTCAGGCAGGCACTTCATCAGCTAAAGGCAGAAAAACAAACAGAGTTAGAAGAAGCGGACCAAGAATTAA
ACCTATTCTCATTTCTGGAAGAGGAGCCAGTTCAGAGTATTGGACTATTGGAACCAGATGGTTCAGAAAAAGGTCATAAC
GATACTGAACTTGAAGAATCAGATAATCAAATTCCTGAAGAGGAAGTCGTCGAAACAATTCCAGAGATTCCAGTAACGGA
CTTTTATTTTCCAGAAGATATGACGGACTTTTATCCAAAGACTGCTAGAGATAAGGTTGAGACAAACATTGCGGCCATTC
GTTTGGTAAAAAATCTAGAAGTAGAGCACCGCAATGCTTCATTAAGTGAACAAGAACTCCTTGCCAAGTATGTGGGCTGG
GGTGGACTTGCCAATGATTTCTTTGATGACTATAATCCAAAATTTTCTATGGAACGAGAAGAACTGAAAAGCCTAGTCAC
TGATAAAGAGTATTCGGATATGAAACAGTCCTCCCTGACAGCCTATTACACAGACCCTGCCCTGATTCATCAGATGTGGG
ATAAGTTGGAAAGAGACGGCTTTACAGGTGGCAAAATCCTAGATCCTTCCATGGGAACAGGGAATTTCTTTGCGGCTATG
CCCAAACACTTAAGAGAAAAGAGTGAGCTATATGGCGTAGAGCTAGATACCATTACAGGAGCCATTGCCAAGCACCTTCA
CCCGAATAGCCATATTGAAATTAAGGGCTTTGAGACGGTGGCTTTTAACGACAATAGTTTTGATTTGGTGATTTCAAATG
TGCCGTTTGCCAATATACGAATTGCGGATAACAGGTACGATAAGCCTTATATGATTCATGACTACTTTGTCAAAAAGTCA
CTTGATTTGGTCCATGATGGTGGACAAGTAGCGATTATCTCTTCCACAGGAACCATGGATAAGCGAACAGAAAACATCTT
ACAAGATATTCGTGAGACAACTGAATTTCTTGGAGGGGTTCGATTGCCTGACTCTACCTTTAAGGCCATTGCAGGAACGA
ATGTTACAACGGATATGTTGTTCTTCCAGAAACACTTGAACAAGGGATATGTGACAGATGACTTAGCCTTTTCAGGTTCC
ATTCGTTATGAAAAGGATAGTCGCATTTGGCTCAATCCTTACTTTGATGGAGAATACAATAGCCAAGTGCTAGGAACCTA
CGAGGTCAGAAATTTTAACGGCGGAACACTTTCTGTTAAGGGGACTAGTGACAACCTCATCGCAAGTGTTGAAACTGCTC
TACATCAAGTAAAAGCCCCAAGAGAGATTGATAGAAATGAAATCATCATTAATCCAGACATATTGACCAAACAAGTCATG
GATACTTCCATTCCAGCTGAAATGAGGGAGAATCTGGGTCAGTACAGTTTTGGTTACCAGGGTTCTACAGTTTACTATCG
AGATAACAAAGGCATTCGAGTGGGGACCAAGACGGAAGAAATCAGTTATTATGTCGATGAAGAGGGCAACTTCAAAGCAT
GGGACACCAAGCATTCTCAAAAACAGATTGATAGATTTATTAGCTTAGAGGTGACTGATAGCACTGCTCTAGATGTTTAT
GTGACCGATGATGCAGCCAAACGTGGTCAGTTTAAGGGTTATTATAAAAAGACAGTTTTCTATGAAACTCCCTTGTCTGA
GAAAGAAGTGGCACGGATTAAGGGAATGGTCGATATTCGCAATGCCTACCAAGAAGTTATTGCCATTCAACGCTATTATG
ACTATGATAAGGAGACCTTTAACCACTTGTTAGGCAAACTCAATCGTACCTATGATAGCTTTGTCAAACGCTACGGGTAT
TTAAACAGTACAGTGAACCGCAATCTTTTTGATAGTGATGATAAGTATTCGCTTCTGGCTAGTTTGGAAGATGAAAGTCT
AGATCCAAGTGGAAAGTCTGTTATCTATACTAAATCCCTTGCCTTTGAAAAGGCTCTAGTGCGTCCTGAAAAAGAGGTTA
AAAAGGTACATACTGCCCTTGATGCCTTAAATTCCAGTTTGGCTGACGGACGTGGTGTTGATTTCGCTTATATGATGTCT
ATCTATCAGGTTGAATCGAAGATGACCTTGATTGAGGAGTTAGGTGACCTCATTATGCCTGATCCTGAGAAGTATTTGAA
TGGGGAACTGTCCTATGTTTCTCGCCAAGACTTTCTGTCAGGTGATGTCGTCACTAAGTTAGAAGTGGTGGACCTATTCG
TGAAACAAGACAATCAGGACTTTAACTGGCCGCATTATGCAGGACTTCTAGAAACAGTCAAACCAGCACGCATTACTTTA
GCAGACATTGATTATCGAATCGGTTCACGCTGGATTCCTTTGTCTGTTTACGGAAAATTTGCCCAAGAAACCTTTATGGG
GAAAGCCTATGAACTGTCAGACCAAGAAGTAACAACAGTCCTTGAAGTCAGTCCCATTGACGGAGTTATCACTTACCAAT
CTAAGTTTGCCTATACCTATTCCAACGCAACGGATAGGAGTTTAGGTGTACCAGGTTCTCGTTATAATAGTGGTCGTAAA
ATATTTGAAAATCTCCTGAATTCCAATCAACCAACCATCACAAAACAAATTGTCGAAGGGGATAAGAAAAAGAATGTGAC
GGATGTGGAGAAAACAACAGTCCTGCGTGCCAAGGAAACACACCTACAAGAACTCTTTCAAGATTTTGTAGCAAAATATC
CAGAAGTCCAACAGATGATTGAAGACACCTATAACAGTCTCTATAATCGTACAGTATCAAAGACCTATGATGGTAGCCAT
TTAACCATTGATGGACTTGCCCAGAATATCTCCTTACGTCCCCACCAAAAGAATGCCATTCAACGGATTGTGGAAGAAAA
ACGAGCTCTACTCGCCCATGAGGTAGGGTCTGGAAAAACCTTGACCATGCTTGGAGCTGGTTTCAAGTTGAAAGAACTAG
GAATGGTACATAAACCACTTTATGTGGTGCCGTCTAGTTTAACTGCTCAGTTTGGTCAAGAAATCATGAAATTTTTCCCA
ACTAAGAAAGTTTATGTGACCACCAAGAAGGACTTTGTCAAAGCCAAACGTAAGCAGTTCGTATCACGTATTATCACAGG
CGACTATGATGCCATTGTCATTGGAGATTCCCAGTTTGAAAAAATACCGATGAGTCGAGAGAAGCAGGTTACCTATATCA
ATGACAAGCTGGAGCAACTCAGAGAAATCAAACTAGGAAGTGATTCTGATTATACGGTCAAAGAAGCAGAGCGTTCAATC
AAGGGACTAGAGCACCAGTTGGAAGAACTCCAAAAACTAGAGCGAGATACCTTTATTGAATTTGAAAACCTTGGAATTGA
TTTTCTTTTTGTGGATGAGGCTCATCATTTCAAGAATATCCGTCCAATCACTGGACTTGGGAATGTCGCGGGAATCACCA
ATACCACTTCAAAAAAGAACGTAGACATGGAGATGAAGGTGAGACAGGTTCAGGCAGAGCATGGCGATAGAAATGTCGTT
TTTGCGACAGGAACACCAGTTTCTAACTCCATCAGTGAACTTTTCACCATGATGAATTACATTCAGCCCGATGTTTTGGA
ACGATATCAGGTATCCAATTTTGACTCATGGGTTGGGGCTTTTGGGAATATCGAAAACTCTATGGAACTAGCCCCGACAG
GTGATAAATACCAACCTAAGAAACGGTTCAAGAAATTTGTCAATTTGCCTGAACTCATGCGAATCTACAAGGAAACTGCC
GATATTCAGACATCAGACATGCTTGATTTACCTGTTCCTGAAGCTAAGATTATTGCGGTGGAAAGCGAGTTAACGCAAGC
TCAGAAATACTATTTAGAAGAACTGGTAGAGCGTTCAGACGCTATCAAGTCAGGTAGTGTTGACCCAAGTAGAGATAATA
TGTTAAAGATAACCGGGGAAGCTAGAAAACTAGCTATTGATATGCGGTTGATTGACCCTGTTTATACCTTATCAGATAAT
CAGAAAATCCTTCAAGTGGTTGATAATGTCGAGCGAATCTACCTTGAAGGAGCAGGAGAAAAGGCTACTCAGATGATTTT
CTCTGATATTGGAACACCTAAAAGTAAGGAAGAAGGTTTTGATGTTTATAATGAACTGAAAGCTTTGCTGGTTGATCGAG
GGATTCCCAAAGAAGAAATTGCCTTTGTGCATGATGCCAATACCGATGAGAAGAAAAATTCCCTATCACGAAAGGTCAAT
AGTGGGGAAGTACGGATTCTCATGGCATCTACGGAAAAAGGTGGAACGGGTCTAAACGTGCAATCTCGCATGAAAGCTGT
CCACCACTTAGATGTTCCCTGGAGGCCTTCTGATATTGTACAGCGAAATGGACGACTGATTCGACAAGGGAATATGCACC
AAGAGGTGGATATTTATCACTACATTACCAAAGGGAGTTTTGATAATTACCTCTGGCAGACACAGGAGAATAAGCTCAAA
TATATCACTCAGATTATGACCTCAAAAGACCCTGTGCGGTCGGCAGAAGACATTGATGAACAAACCATGACCGCTTCTGA
CTTCAAAGCTCTAGCGACAGGTAACCCCTATCTCAAACTGAAAATGGAATTGGAAAATGAACTGACGGTGTTAGAAAATC
AAAAACGAGCCTTTAACCGTTCAAAAGATGAATATCGTCACACTATTTCCTATTGCGAGAAGCATCTCCCTATCATGGAG
ATACGGTTGAGCCAATACGATAAAGATATTGCCCAATCCCTAGCAACTAAACATCTAGATTTTGTCATGCGGTTTGACAA
TCAGGCGATGGATAATCGTGCTGAAGCAGGAGACTACCTGCGTAAACTCATTACCTATAATCGCTCAGAAACTAAGGAAG
TCAGGACTCTGGCCAACTTTAGAGGATTTGATTTGAAAATGACTACACGAGGTCCTAGTGAGCCCTTACCAGAGACCGTC
TCTTTAACGATTGTAGGTGATAACCAATACACAGTCGCTCTTGATTTGAAATCAGACGTGGGAACCATTCAACGGAGTAG
TAATGCCATTGACCATATAATAGATGACCAAGAAAAGACAGAAGGGGTGGTAAAGGATTTAAAAGATAAGCTTCAAGTAG
CCAAAGTAGAAGTTGAAAAAGTCTTTCCCAAGGAAGAAGATTATCAGCTTGTAAAGGCTAAGTATGATGTTTTGGCTCCC
TTGGTTGAAAAAGAAGCAGAAATTGAGGAAATAGATGCGGCTTTGGCCAAGTTTAGTGAAGATACAACACCCCAAATGAA
GCAACAAATAGCACTCGAGATATAA
|
| Protein sequence : | |
MNQEVLLQMMRATIPRDRALLEAFLYYQAEHFDEEWDSLVYQFMTNRQGIKRSVQVLHFETDVSAFVQASPYDTAHDLLT
YTQVFGQTGLQKLDKLSPSEKDLVIEVALFNLATRFQLLDSNGHYQTISPDSLLQKSRGANLVNVYRVANNLADRISRDI
EQFLLTYEPELEIKVDETVLENEETGDEHKASVHQAISFREDGSLIIASLDVDLSQLDVQTGKTSHLPAYEALSLRRKFE
ILTYFDQIRNERSKVPSFRRGDFDTETEMTPVFEGEELLTYLEADGTPYELKRTLTTVEEKELEKIGQAIWIENQEKLTQ
LGIELSQFESDQVGILLDAAGRFRLKNADLALLGGYPKASVTQLALATELLQMGLSHEKVEFFFGSQLSIEELRQVAYAF
LHQELSREDAEQFEKDKRNQPDLTLRDWKSKLEKAESKVVVDEEFAENPLVQRVLDTYPLGSLVSYKGQDFEVVSVSDAR
LNGLIRIELVNDFSDIIEQNPVLYMRTWEEVRQALHQLKAEKQTELEEADQELNLFSFLEEEPVQSIGLLEPDGSEKGHN
DTELEESDNQIPEEEVVETIPEIPVTDFYFPEDMTDFYPKTARDKVETNIAAIRLVKNLEVEHRNASLSEQELLAKYVGW
GGLANDFFDDYNPKFSMEREELKSLVTDKEYSDMKQSSLTAYYTDPALIHQMWDKLERDGFTGGKILDPSMGTGNFFAAM
PKHLREKSELYGVELDTITGAIAKHLHPNSHIEIKGFETVAFNDNSFDLVISNVPFANIRIADNRYDKPYMIHDYFVKKS
LDLVHDGGQVAIISSTGTMDKRTENILQDIRETTEFLGGVRLPDSTFKAIAGTNVTTDMLFFQKHLNKGYVTDDLAFSGS
IRYEKDSRIWLNPYFDGEYNSQVLGTYEVRNFNGGTLSVKGTSDNLIASVETALHQVKAPREIDRNEIIINPDILTKQVM
DTSIPAEMRENLGQYSFGYQGSTVYYRDNKGIRVGTKTEEISYYVDEEGNFKAWDTKHSQKQIDRFISLEVTDSTALDVY
VTDDAAKRGQFKGYYKKTVFYETPLSEKEVARIKGMVDIRNAYQEVIAIQRYYDYDKETFNHLLGKLNRTYDSFVKRYGY
LNSTVNRNLFDSDDKYSLLASLEDESLDPSGKSVIYTKSLAFEKALVRPEKEVKKVHTALDALNSSLADGRGVDFAYMMS
IYQVESKMTLIEELGDLIMPDPEKYLNGELSYVSRQDFLSGDVVTKLEVVDLFVKQDNQDFNWPHYAGLLETVKPARITL
ADIDYRIGSRWIPLSVYGKFAQETFMGKAYELSDQEVTTVLEVSPIDGVITYQSKFAYTYSNATDRSLGVPGSRYNSGRK
IFENLLNSNQPTITKQIVEGDKKKNVTDVEKTTVLRAKETHLQELFQDFVAKYPEVQQMIEDTYNSLYNRTVSKTYDGSH
LTIDGLAQNISLRPHQKNAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPLYVVPSSLTAQFGQEIMKFFP
TKKVYVTTKKDFVKAKRKQFVSRIITGDYDAIVIGDSQFEKIPMSREKQVTYINDKLEQLREIKLGSDSDYTVKEAERSI
KGLEHQLEELQKLERDTFIEFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDMEMKVRQVQAEHGDRNVV
FATGTPVSNSISELFTMMNYIQPDVLERYQVSNFDSWVGAFGNIENSMELAPTGDKYQPKKRFKKFVNLPELMRIYKETA
DIQTSDMLDLPVPEAKIIAVESELTQAQKYYLEELVERSDAIKSGSVDPSRDNMLKITGEARKLAIDMRLIDPVYTLSDN
QKILQVVDNVERIYLEGAGEKATQMIFSDIGTPKSKEEGFDVYNELKALLVDRGIPKEEIAFVHDANTDEKKNSLSRKVN
SGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNGRLIRQGNMHQEVDIYHYITKGSFDNYLWQTQENKLK
YITQIMTSKDPVRSAEDIDEQTMTASDFKALATGNPYLKLKMELENELTVLENQKRAFNRSKDEYRHTISYCEKHLPIME
IRLSQYDKDIAQSLATKHLDFVMRFDNQAMDNRAEAGDYLRKLITYNRSETKEVRTLANFRGFDLKMTTRGPSEPLPETV
SLTIVGDNQYTVALDLKSDVGTIQRSSNAIDHIIDDQEKTEGVVKDLKDKLQVAKVEVEKVFPKEEDYQLVKAKYDVLAP
LVEKEAEIEEIDAALAKFSEDTTPQMKQQIALEI
|
|
