PAI Gene Information


Name : nagA (CMM_0049)
Accession : YP_001220788.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : putative beta-N-acetylglucosaminidase
Function : -
Note : putative beta-N-acetylglucosaminidase (ZP_00187564.2| COG1472: Beta-glucosidase-related glycosidases [Rubrobacter xylanophilus DSM 9941]; NP_626989.1| beta-N-acetylglucosaminidase (putative secreted protein)[Streptomyces coelicolor A3(2)]). ,InterPro: Gly
Homologs in the searched genomes :   33 hits    ( 33 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
ATGGCTCACGAATTAGAACCTGACAACGGTAGCTCCTTCAGCCGAAGGGGTTTTCTTACCGCCGCGGCCTCCATCGGCGC
TGCGGTCGCCGTGCAGGCGACGGAGGAAGGGGGCGACGCAGCTCGTGCATCGACAGCGAACATTGATGTCGTCCGCCTGG
TCCAGGGCATGTCGCTCGAGGATAAGGTCGCACAGTTGTTCGTCCTCGCGGTCTCCGGCCGTACGGCCGACACCGCAGAC
CCCGCGGCTGTGACGGCCAATCGCGCGGCTTACGGCGTCGCTACTCCGGCGGAAGTCGTCGCCCGGCACCGGCCTGGCGG
CATCATCTACTTCGCCGGAGAGAAGGACAACCTCGTCGACCCGCGGCAGATCGCGCGGCTGTCCGGCGACTTGCAGCGTG
CGTCACAGGGAGCGGGCCGAATCCCTCTCCTCGTCTCCACGGATCAAGAGCAGGGAGGCTATGTCGTGCGCGCTCCGTGC
ACGTTGCTTCCCGGACAGATGGGATTGGCCTCGAGCCCGAGTTCCTCTGCCGACGTTCGCGCGGTGGCGACCATCACGCG
GGACGAGCTCCTCGCGATGGGCATCAACCAGGCCTTCGCGCCGGTGGTGGATGTGGCCTCCAACCCCGCAAACCCAATCA
TCCACGTGCGCTCCTTCGGGGACGATCCGGACCGGGTTGCTTTGCTCGCGCAGTCCCAGATCGGCACGTTCCAGAAGCGG
CAGGGGATCGTGGCTGCGGCAAAGCACTTCCCCGGTCACGGCGCCACCGACACTGATAGCCACACCGGCCTTCCCGTAAA
CAACCGAAGCCGCTCGGAACTGGAGGACAACGACCTCCCGCCCTTCGCCGCGGCAATCAAGTCCGGCGTAGGCGTCATCA
TGTCCGCCCACATTGTCGTGCCGGCCCTCGACTCCAGCGGCGACCCGGCTACCCTGTCCTACCCCATCCTCACCGGAGTG
CTCCGCCAAAAGCTCGGGTACGACGGTGTCGTCATCACGGATGCACTTGACATGGCGGGTGTACGACAGCGCTACAGCGA
TGCGCGCGTTCCCGTGCTGGCGATCAAGGCCGGAGTCGACCAGCTGCTCACGCCTCCAGACTTTTTCGCCGCACGCGACG
GGGTCCTCGCGGCCATCCGTGCCGGCGAGCTCACGGAGGCGCGAATCGATGAGTCCGTGACCCGCATCCTGCGTCTCAAG
CAGCGCTTTGGACTCCTCACCACAGCGAAGGTCCATGGCGACCCCTCTATCGTCCGGAGCGTGACGCACCTCGCGACCGC
TGCGGAGGTCACCGATCGCACCATCACGGTCCTGAAGGACGACGACGGCCTCCTCCCTCTGCCAGCTCGACCCCGGAAGG
TGCTGGTGACCGGTTGGGGCGCCGTCACCACCGCAAGCCTCGCCGACGTACTCACCGCTCATGGAGACACCACCACGCTC
TCCACCACCGGCATCTCACCAGATGCGGCGACCGTCACGAGTGCAGCGACACTCGCAAAGCAGGTCGACCTCGTCGTAGT
GTGTACGCGCAATCTGGGCGCTGACACGAGCTCCGGACAGTTGAGCCTCGTATCCGCGCTTATCGCGTCCGGTACCCCGG
TCATCTCCGTCGCGGTGCTGGAGCCGTATGACATCGCTCACACTCCCCAGGTACGCACGCACCTCCTTACATACTCGTAC
GCGAAGAACGCCCTCGAAGCGTTGGGTCGTGTCCTCCACGGAGAAGTTGCGGGGACCAGCGTGCTGGCCGTGGACATCCC
ATTCAGCGACGGCACAGACGTGCTCTTTCCGCGGGGTTCGCACGTCAGGCGCACCCGCTCCTGA

Protein sequence :
MAHELEPDNGSSFSRRGFLTAAASIGAAVAVQATEEGGDAARASTANIDVVRLVQGMSLEDKVAQLFVLAVSGRTADTAD
PAAVTANRAAYGVATPAEVVARHRPGGIIYFAGEKDNLVDPRQIARLSGDLQRASQGAGRIPLLVSTDQEQGGYVVRAPC
TLLPGQMGLASSPSSSADVRAVATITRDELLAMGINQAFAPVVDVASNPANPIIHVRSFGDDPDRVALLAQSQIGTFQKR
QGIVAAAKHFPGHGATDTDSHTGLPVNNRSRSELEDNDLPPFAAAIKSGVGVIMSAHIVVPALDSSGDPATLSYPILTGV
LRQKLGYDGVVITDALDMAGVRQRYSDARVPVLAIKAGVDQLLTPPDFFAARDGVLAAIRAGELTEARIDESVTRILRLK
QRFGLLTTAKVHGDPSIVRSVTHLATAAEVTDRTITVLKDDDGLLPLPARPRKVLVTGWGAVTTASLADVLTAHGDTTTL
STTGISPDAATVTSAATLAKQVDLVVVCTRNLGADTSSGQLSLVSALIASGTPVISVAVLEPYDIAHTPQVRTHLLTYSY
AKNALEALGRVLHGEVAGTSVLAVDIPFSDGTDVLFPRGSHVRRTRS