PAI Gene Information


Name : CMM_0072 (CMM_0072)
Accession : YP_001220811.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : conserved hypothetical protein (NP_631356.1| conserved hypothetical protein SC5F8.11c. [Streptomyces coelicolor A3(2)]; AAD31327.1| beta-lactamase-like protein [Mycobacterium smegmatis]). pfam00753,Lactamase_B, Metallo-beta-lactamase superfamily.; Family
Homologs in the searched genomes :   17 hits    ( 17 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
ATGAGTAGGAACAAGGGTGACGCATACACGATCACGGCCGTGGAAGCGGATGTGTTTGTGGTTCGCGGGTCCCATGTCAA
CTGGTCAATTCTGACCGAAGGGTCCGGCATGACGCTCATTGACGCCGGCTATCCCGGGAACAGCGCGGCAGTCCTGGATT
CACTTGAAGAAGTCAGCGCCAAAACAGGCGCGCACCGCCTTGAAGCTATAGTCATCACGCACGGCCACTCGGACCATATC
GGGGGCCTCACGGCTGTGCTGGACGCGCTCCCAAACACTCCTCGAGTCTTGTGCTCACTGCTCGAGGCGAGCCACGTACG
CCGTGAGCACCTGCAGCAGGTGACACTGCGACAGGTGCTCCGCCATGCGGGTCAACCTGGAGTGCTTACATGGTTGCTAG
CGGCAATACAGCAGGGCGGCCTGAAGGAGGTGGGCTACTCCGACGTGCAGGCCTTCGCGGGAGATGCTTCCCTTGATATT
CCCGGTCGCCCGTCCCCTGTCGACGCGCCCGGACATACGGAGGGCCACACAGCGTACTATCTCGAAAGGGCCGGCGTGCT
GGTAACAGGAGACGCCCTCATTACAGCGCATGCGACGTCACGCGACGTGGGACCTCAACTGCTGCATCCTATGTTCCATG
GCGATGTCCAGGCGACTCGTGAAACGTACGACCGACTCGTGAACTGGCCCTACGCCGTGCGCTTCGCCCCCGGGCATGGG
CCCGTGGTAAGTAGCCGCTGA

Protein sequence :
MSRNKGDAYTITAVEADVFVVRGSHVNWSILTEGSGMTLIDAGYPGNSAAVLDSLEEVSAKTGAHRLEAIVITHGHSDHI
GGLTAVLDALPNTPRVLCSLLEASHVRREHLQQVTLRQVLRHAGQPGVLTWLLAAIQQGGLKEVGYSDVQAFAGDASLDI
PGRPSPVDAPGHTEGHTAYYLERAGVLVTGDALITAHATSRDVGPQLLHPMFHGDVQATRETYDRLVNWPYAVRFAPGHG
PVVSSR