PAI Gene Information


Name : ppaD (CMM_0075)
Accession : YP_001220814.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : putative extracellular serine protease
Function : -
Note : putative extracellular serine protease (NP_779169.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]; YP_061793.1| secreted protein [Leifsonia xyli subsp. xyli str. CTCB07]; ZP_00293497.1| COG3591: V8-like Glu-specific endopeptidase [Thermob
Homologs in the searched genomes :   5 hits    ( 5 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
ATGACTGCCCTATGGAAAAATCGCTTCTCAGTCCTAGCCCTGCTGCTGCTCGTCGTCATGGTCGGGCAGTCGTCAGTTGC
TAGACCCGCTCAAGCGGCGGGGCCGACGGGGACGGCGTTCTCTGATGACACCGGCCAGAGCTTTTCCGATGCAGAGGCTT
CCGACGCTGTGAGGTCCTGGACTCCGGAGGCACTTGCCGCCGCCAGCGATCTCGACCGCCCGAGCGATGCTGTCAATGCC
CCGGTAACAGGTGCCACCGAGCAGGCCCTGATCACGCAGGGCGCTGGGACCTTTGAGCCTGTCTACTGGATCGGTCGCAT
CTACTTCGATGTTGACGGGCGCCAGTACTCGTGCTCTGGATCCTCCATTCGCTCAGACTCTCAGCTGGTCGTCGCCACTG
CGGCCCATTGTCTATACGACCACGGCGAGTGGTCCACCCGCGTGGTATTCATCCCGGCTTGGGACGGCGCTAACAAGCCC
CTCGGCGTCTGGGGTGCCTTCTTTTACGCCGTCTCCCGGGACTGGCGGACCACAGAGGACCCGGGTCACGACGCAGCGTT
CATCAAGATGGCTCCAAAGACTGCGTGGGATGGTTCCAAGGAGTACTTGGCCAGCAAGGCGGGAGCTCCCGCTCCTACAT
TTTCGGCCGCGATGCCCGGCCTCCACTTTGAGGCATTCGGGTACAGGCCGCTCGGTGGCTATGTCCCCGCACCCCTCTAC
ACGTGCGCAGGTGAGGGCAGGCACTTCCGCGGATTTGCCTCCATCCCGGAGTACGAGATCGCCAATTGTGACCCGCCGGG
AGGAGCCTCTGGTGGCCCCGTCTATCACGCGTCGACGCATGGCCCGAACGGGACTCAATACGGTGTCATCACGGAGACGC
GACGCGCTCGAGATGGGTCACCGCTGCTCATCTTCGTACCCTGGGGTCAGGTGGAGTACAGCCTTTATCGGTCCGTTGAC
CTGTGGCCCAAGTGA

Protein sequence :
MTALWKNRFSVLALLLLVVMVGQSSVARPAQAAGPTGTAFSDDTGQSFSDAEASDAVRSWTPEALAAASDLDRPSDAVNA
PVTGATEQALITQGAGTFEPVYWIGRIYFDVDGRQYSCSGSSIRSDSQLVVATAAHCLYDHGEWSTRVVFIPAWDGANKP
LGVWGAFFYAVSRDWRTTEDPGHDAAFIKMAPKTAWDGSKEYLASKAGAPAPTFSAAMPGLHFEAFGYRPLGGYVPAPLY
TCAGEGRHFRGFASIPEYEIANCDPPGGASGGPVYHASTHGPNGTQYGVITETRRARDGSPLLIFVPWGQVEYSLYRSVD
LWPK