Name : CMM_0087 (CMM_0087)
Accession : YP_001220826.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : TetR family transcriptional regulator
Function : -
Note : putative transcriptional regulator, TetR family (ZP_00120758.1| COG1309: Transcriptional regulator [Bifidobacterium longum DJO10A]; NP_793102.1| transcriptional regulator, TetR family [Pseudomonas syringae pv. tomato str. DC3000]). pfam00440, TetR_N,Bacte
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.
-Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.
| DNA sequence : |  |
ATGCCCACCAGTCCTAGAACGCGCGGACCGTACCGCAAGGGTGTGGAGCGCCGCCGCGAGATCGTCGCGGCGGCGGCTCA
GCTGTTCAGCGAATCCGGGTACACGCACGCTTCCATGCGCGAGCTTGCAAAGCGTGTCGGGCTGTCCCAGGCGCTGCTGC
TGCACTACTTCTCAGACAAGGAGGACCTGCTCGTCGAGGTGCTGAACCTCCGCGACGCGTCGGTCGCCGAGTACCTCGCC
GACATCGCCGACAGCGACATCGCGACGCGCTCTCGGAAGGTCGCTCGCCACGCGGCGGAGCACGAGGGCCTGACATCGCT
GTACATCGCTCTGTCTGCCGAAGCCATCGACCCGGAGCACCCTGCGCACGAGTACTTCGCCGACCACTACCGGTCTGCGC
AAGAGCAGACACGGGAGCCCGGCGCTGACGCGGGCGTCGTACCCGCGGGCGTAAGCCCTGAGTTGGTGACGGCGTTGGGC
ATCGCGGTTATGGACGGGCTGCAGGTGCAGCGTCAGTACCGTCCCGATGTGGATCCGGTCGCTGCCGTGGACGCGTTCTG
GGAACTCGTCGCCGCCGCTCGATCCTGGTGGTCACTCACGGCGCAGGACCCGGAGATCGCTGCAGGAGCAGCACCCGTGC
CGCTCATCACTGAGCATGCCGAGGTCGATGCGAGCGCTCAGGGTGGTACTGAGGATGCTGTCCTCCAAGGTGCTCCCGGT
CCCGACGGCGCCACTTCGCCCTCCTAA
|
| Protein sequence : | |
MPTSPRTRGPYRKGVERRREIVAAAAQLFSESGYTHASMRELAKRVGLSQALLLHYFSDKEDLLVEVLNLRDASVAEYLA
DIADSDIATRSRKVARHAAEHEGLTSLYIALSAEAIDPEHPAHEYFADHYRSAQEQTREPGADAGVVPAGVSPELVTALG
IAVMDGLQVQRQYRPDVDPVAAVDAFWELVAAARSWWSLTAQDPEIAAGAAPVPLITEHAEVDASAQGGTEDAVLQGAPG
PDGATSPS
|
|
