PAI Gene Information


Name : bglD (CMM_0097)
Accession : YP_001220836.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : glycosyl hydrolase family beta-glucosidase
Function : -
Note : putative beta-glucosidase, glycosyl hydrolase family 3 (ZP_00229019.1| COG1472: Beta-glucosidase-related glycosidases [Kineococcus radiotolerans SRS30216]; AAF43783.1| xylosidase/arabinosidase [Thermoanaerobacter ethanolicus]). pfam00933, Glyco_hydro_3, G
Homologs in the searched genomes :   27 hits    ( 27 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
ATGCCCGACCTCCTGCCATACCGCGACCCCTCCTTGCCCACGATGGAACGAGTCCGCGATCTGCTCGGACGCATGACCCT
CGAGGAGAAGGCCGCACAGATCGCCTGTCCGTTCGGTACCGCCGTCGACGTGCACCGACCGCCGCAGGAGGGGTGGGGTA
CCGCGGTCGCCGCACTCGCCGCCCTCGGAGAGGTGCCTCGCGAGGCGGCCCGTCTGGGAAACGAACTCCAACGCAAGCAC
GTCGAGGAGACCCGACTCGGGATCCCCGTCCTCCTCGCCGAGGAGGCACTCATCGGCCTCAAGGTCCGTAGCGCCACCAC
CTTCCCCGACGCCCTCGCCCAAGCCGCGACCTGGGACACCGATCTCATCGAGGCGATGGCGAAGACGATCGGCGTGCAGA
TGGCGCGGCTCGGCGTGCGTCAGGCGCTGTCGCCACTCGCTGACGTCAGCCGCGACCCGCGCTGGGGGCGGGTGGAGGAG
ACCTACGGCGAGGAGCCGTACCTCGTGGGATCGATGGCGACGGCCTTCGTTCGTGGTCTGCAAGGGGCGGAGGAGGACAC
TCCCCTGATCGCCACGCTCAAGCACTTCGTCGCCTATGGCGCCAGTGACGGAGGGCGCAACACGGACGCGGCGCACCTCG
GCCACTCCGAGCTCCACGAGGTCTACGCCCTTCCATTCGAGATGGCCATCCGTGTGGGAGGCGCCCAGGGGGTCATGCCC
GCCTACAACTCGATCGACGGCGTCCCCGTGACCGGATCCGCGGAATACCTGGTCGGCCTCCTCCGTGATCGGCTGGGCTT
CGAGGGTCTCATCACCTCCGACCTCGAGGCCGTCTCGCAGTTGTTCACCAAGCACGGCACTGCCGCCGACATCCCCCATG
CATTCGCCCAGGCCTTGCGCGCGGGCGTGAACGCCGACCTCGACAACACGGTATCGACCCGTGTCATCCTCGAGGCCGTC
CACGAGGGACTTCTCTCGATCGACGAGCTGGACGCCGCAGCAGCTGGCAGCCTGAGGGCGAAGCTCGAGCTCGGGCTGTT
CGAACGGCCGTACGTCGATCTCGACCGTGTGCCCGAGACTCTCGACTCGGAGTCCGACAGGGCCCTCTCTCGAGCAGTCG
CCGAGAAGTCCGTCATCCTCCTGCGCAATGCGCCCGTCAACGGCACGCCCCTCCTCCCCCTACCCGACTCCCCGCAGACC
ATCGCGGTGATCGGTCCGAACGCGGATCGGCTGATGGGGCAGCTCGGTAACTACAGCTACCAGGTCCTCGACAGCATGAC
GAGGCGCTTCGCGCAGGCGGCCAACCCCCAGGCGCGCATGGAGTCGGCCCAGGCGATGGGCGCCGACAACGCCGACCTGC
TCGTCGACTCCGTGCCGGTGGTCACGTTCCTCGACGGCATCCGATCGAGGGCGCACGCCGACTCGAAGATCGTGTATGCG
GCGGGCTGTCCCGTCGCCGCCGAGGATCGCTCCGGTATCGCCGCGGCCGTCGCGCTCGCTCGAACCGCGGACGTCGTGAT
CCTCGTCGTCGGAGACCAGTCCGGCATCGGAGCCTTCGGCACGGTCGGTGAGGGACTCGACAGTGTCACCTGCGAGCTGC
CTGGCGTCCAGCGCGAACTCGTGGAAGCCGTCGCCGCATCGGGAACGCCGACCGTCGCCGTCCTGAGCCACGGACGTCCC
TTCGTCCTGGGCTGGATGACTGAGAAGGTGCCGGCCATAGTCTCGTCGTTGTTCGGCGGCGAAGAAGCGGGGACGGCCGT
CGCGTCGGTCCTCTTCGGCGACGTGAATCCCGCCGGCCGCCTCCCGATCGCCATGCTCACCTCGGTGGGAGCCGCCCCGC
TGCCATACTGGCGGACCCTGCAGCCCAGCCACTATGTAGACGGCACCTCGACAGCGGTGTTCCCCTTCGGACACGGACTC
AGCTACACCGACTTCGCCTACCGCGACCTCGCGATCGGCTCGCCTGAGGTCAGCACGGATGGGGTCGTACGCCTCGAGTT
CACCGTCGAGAACGTCGGTGCCCGTGCAGGCGAGGAAGTCGTCCAGGTATACGGCCAGGACGTCATCGGCAGCACGGTGC
GCCGAGGCCGAGTCCTGGTGGGCTTCCGCCGCTTCGCTCTCGAGCCCGGAGAAGCGGTCCGGGTGTGCATCGACGTGCCG
ACGAGCATGTTCGCCCTCTGGAACGGGACGCGGGGGTGGGTCGTCGAACCCGGGCTGCTGCGCTTCTACATCGGGGGCTC
CTCCGCGCGCACACCGCTTCAGGCTCGCGTCACCTTGACCGGTGGGGAGCATGAGCCGGGCGATCAGCGCCCCCTCTTCA
GCAGCATCACGCTGAGGGACGTCGAACCCGGCGACCGACTCGACGGAGGAGCCGACGCGTTCGATGCGGGAGCCATCCAG
CGCGTCACGGCTGAGAGCACGATTCGGGAGTGGCTGGATCACCCGATCGGCGGGCCGGCGTTGCGTAGTGCGCTTGGCGG
CATCGAAGAGAACCTGCTTTCGGCGGCGTTCGGGCTCACTCTGACGAAGATGGCCTTGTACAGCCAGGGAGCGATCACGG
ACGAAACCGTCGAACGGCTCATCACGGTCGTAGAGCGTGCCTACTCGGACAGCGATCGCGCCTGA

Protein sequence :
MPDLLPYRDPSLPTMERVRDLLGRMTLEEKAAQIACPFGTAVDVHRPPQEGWGTAVAALAALGEVPREAARLGNELQRKH
VEETRLGIPVLLAEEALIGLKVRSATTFPDALAQAATWDTDLIEAMAKTIGVQMARLGVRQALSPLADVSRDPRWGRVEE
TYGEEPYLVGSMATAFVRGLQGAEEDTPLIATLKHFVAYGASDGGRNTDAAHLGHSELHEVYALPFEMAIRVGGAQGVMP
AYNSIDGVPVTGSAEYLVGLLRDRLGFEGLITSDLEAVSQLFTKHGTAADIPHAFAQALRAGVNADLDNTVSTRVILEAV
HEGLLSIDELDAAAAGSLRAKLELGLFERPYVDLDRVPETLDSESDRALSRAVAEKSVILLRNAPVNGTPLLPLPDSPQT
IAVIGPNADRLMGQLGNYSYQVLDSMTRRFAQAANPQARMESAQAMGADNADLLVDSVPVVTFLDGIRSRAHADSKIVYA
AGCPVAAEDRSGIAAAVALARTADVVILVVGDQSGIGAFGTVGEGLDSVTCELPGVQRELVEAVAASGTPTVAVLSHGRP
FVLGWMTEKVPAIVSSLFGGEEAGTAVASVLFGDVNPAGRLPIAMLTSVGAAPLPYWRTLQPSHYVDGTSTAVFPFGHGL
SYTDFAYRDLAIGSPEVSTDGVVRLEFTVENVGARAGEEVVQVYGQDVIGSTVRRGRVLVGFRRFALEPGEAVRVCIDVP
TSMFALWNGTRGWVVEPGLLRFYIGGSSARTPLQARVTLTGGEHEPGDQRPLFSSITLRDVEPGDRLDGGADAFDAGAIQ
RVTAESTIREWLDHPIGGPALRSALGGIEENLLSAAFGLTLTKMALYSQGAITDETVERLITVVERAYSDSDRA