PAI Gene Information


Name : bglI (CMM_0103)
Accession : YP_001220842.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : beta-xylosidase glycosyl hydrolase family 43
Function : -
Note : putative beta-xylosidase, glycosyl hydrolase family 43 (14-beta-D-xylan xylohydrolase) (NP_244550.1| xylan beta-1,4-xylosidase [Bacillus halodurans C-125]; ZP_00066469.1| COG3507: Beta-xylosidase [Microbulbifer degradans 2-40]). pfam04616, Glyco_hydro_43,
Homologs in the searched genomes :   3 hits    ( 3 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
GTGGACGCTCACCGCACCGTGATCTGCAATCCCATCGATCTGCCGTATCGCTATCAGGACTTCGGTCGCGGCCCCGTACG
CGCGGTGTTCCGCGAGGCAGCCGACCCCTCCGTCGTGCTGTTCCGGGGCAGGTACTACCTGTTCGCGTCCATGACCGGAG
GCTTCTTCCACTCCGACGATCTCGCGTCGTGGGTCTTCGTCGCCACGCCGCAGCTGCCGGAAGGGGATTACGCCCCGGAT
GTCCGCGACATGGACGGGAGCCTCTACGTCACAGCCTCCCGACGGAGGGGCCCCTGCCCGGTCCTGCGGTCACGCGACCC
GCTCGTCGAGCCATTCGCCCTCGTCGCGGAGAGCTCGTTCGCCTACTACGACCCCAACTACTTCCAGGACCGGGACGGGC
GGAGGTACCTGTACTGGGGCTGCTCCAACAAGGAGCCTCTACGTGGAGTGGAGGTCGACCAGGACTTCCGCCCGCTCGGA
AGCGCCGTCGACCTGCTCTCGGGGCAGCCCGACGAGCACGGCTGGGAACGACCGGGCGAGTCCAATGTGGTGCGCCCGCC
GTCGACCATCAGGGAGAAGCTGTCAGCGCGCCTCTTCGGGACCCACAGCACGACGCCGTTCATCGAGGGCGCTTGGATGA
CGGAGCACGACGGAACGTACTACCTGCAGTACGCGGGCCCCGGTACCGAGTACAACGTGTACTCGGACGGTTACTACACG
GCGAGCAACCCGCTCGGCCCCTACACCTACTCACCCGACAGCCCCTTCTCCTCCAAGCCGGGTGGCTTCGTCACCGGTGC
AGGGCATGGCAGCACCTTCCAGGACGCGCACGGCAACTGGTGGCATGCCGCGACCATGCGCGTGTCGGTCAATCACCACT
TCGAGCGTCGGATCGGCCTCTTCCCTGCAGGATTCGACGAGGACGGCACGCTGTTCTGCAATCAGACCTTCGGTGACTAC
CCGACCGTCGTCCCGGACGGACCAGCCGATCCGTGGCATGACCACTCGCCGCGATGGATGTTGCAGTCGTATCGGTCGGC
GACCTCTGCCACGTCCCATGCTCAGGGCCACGGGCCGGAGCTCGCGGTTGACGAGGACATCCGCACCTGGTGGGCCGCCG
GCTCCACGCGTCCCGGTGAAGCGTTGACGCTCGACATGGGGACGCCTCGGACGGTGCACGCGATCCAAGTCAATCTCGCC
GACCATGAGATGGTGAAGCACAAGCCGGCTCGGCCACTGCGGGATCCGGACGAAGCACGCGACGCGTTCCGCGCCGTGGT
GGTCGAGGATGTGCCGGTCCGTTACCTGCTCGAGGCGTCCGAGGACGGAACCACCTGGGTCACTCTCCATGACGGAGGCG
TCGATCCCTCCGATGCGCCGCATCGACTGATCCGACCACAGCAGCCATTCCCCGTCCGCTTCATCCGTGTGACAGGTATC
AGCATGCCCTGGGGTGGCGTCTTCGCGATCAGCGGTCTTCGCGTGTTCGGGCATGACGGAAGGCCGCGGCCAGCCGCGGT
CGTGCCGCGTCTCCAGAGGACCCAGCCGACAGCTGCCCGAGTGCGATGGCAGGCGGACGACTCGGCTGATGGCGTCGTCA
TCCGCTATGGACGTCGCCCGGATCGGCTGTACCACTCCTGGCAGGTCTGGGGGGCGGCGGAGCTGGAGCTGCCGACCCTG
AACGCCGGGGAGGACTACTGGATCGCTGTCGACGCGTACAACGCCGGAGGGGTCACCCCGGGGGAAGCAGTCGCGCTCTC
GGCGTGA

Protein sequence :
MDAHRTVICNPIDLPYRYQDFGRGPVRAVFREAADPSVVLFRGRYYLFASMTGGFFHSDDLASWVFVATPQLPEGDYAPD
VRDMDGSLYVTASRRRGPCPVLRSRDPLVEPFALVAESSFAYYDPNYFQDRDGRRYLYWGCSNKEPLRGVEVDQDFRPLG
SAVDLLSGQPDEHGWERPGESNVVRPPSTIREKLSARLFGTHSTTPFIEGAWMTEHDGTYYLQYAGPGTEYNVYSDGYYT
ASNPLGPYTYSPDSPFSSKPGGFVTGAGHGSTFQDAHGNWWHAATMRVSVNHHFERRIGLFPAGFDEDGTLFCNQTFGDY
PTVVPDGPADPWHDHSPRWMLQSYRSATSATSHAQGHGPELAVDEDIRTWWAAGSTRPGEALTLDMGTPRTVHAIQVNLA
DHEMVKHKPARPLRDPDEARDAFRAVVVEDVPVRYLLEASEDGTTWVTLHDGGVDPSDAPHRLIRPQQPFPVRFIRVTGI
SMPWGGVFAISGLRVFGHDGRPRPAAVVPRLQRTQPTAARVRWQADDSADGVVIRYGRRPDRLYHSWQVWGAAELELPTL
NAGEDYWIAVDAYNAGGVTPGEAVALSA