PAI Gene Information


Name : CMM_0104 (CMM_0104)
Accession : YP_001220843.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : sugar permease
Function : -
Note : putative sugar permease (MFS superfamily) (ZP_00229022.1| COG0477: Permeases of the major facilitator superfamily [Kineococcus radiotolerans SRS30216]; CAD47966.1| hypothetical protein [Arthrobacter nicotinovorans]). pfam00083, Sugar_tr, Sugar (and other)
Homologs in the searched genomes :   4 hits    ( 4 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
ATGTCCGAAGACGAACGCGGGACCCGGCGGGCCGACTCGCCGCGCAACGCCCTTGTCAACATCTCTCCGCTCACCGACCC
GAACATCGAGGCGACGCAGCGCGAAGCCGCGGGAGCGTTCGGCGGCGATCCTGTAGTCACCGGGACGTCCGAGAGCAACG
AACCGCCCCGCGTGGGCGCCGGCTTCGTCGCCGTCTACTCCCTGACGTACTTCGGCTTCTTCCTCGTGCTCTTCGTGCCG
TCGCTGTTCAGCCTCGCGTACAAGGTGCAGCTCATCGAGCCCGAGGGGAAGGAGGCGGCTCTGGGTCTGATCGTCGGGAT
CGGAGCACTCTTCAACCTCATCCTCGGCCCGATCTTCGGCGTGCTCAGCGATGCGACACGACTCCGCTGGGGACGGCGGC
GCCCGTTCCTCGTCTTCGGTCTCGGCGTGGCGGCTCTTGCGGCCTGCCTGATCGCGATCGCGCCGTCTGTACCGCTCGTC
CTCGCGGGCTGGATCATCGCGCAGGTCGCAGCAAGTGCGATCAGCGCCGCACTCAATCCAACCCTTCCCGAGCGCGTACC
GGCTGAACAACGCGGAAAGCTGGGCGCTCTGAGCGGCGTGGCGGCGTCCATCGCCGGCGTGAGCGCGACCCTCGTCGGCA
GCCTCCTCACCGGCGATCTCGTCCTCCTCTTCCTGCTGCCGGTGGCTGTGCTGGCCGTCGGAGTCGTGCTGTGGCTGTTC
GTCGTCCCGGACGCTCCCGCACCCGCGGGAGCACAACGACCGATCGGGGCAGCGCTGCGTTCCTTGCTCTTCGACCCGCG
CAAGCACCCCGACTTCGCCTGGGTATGGATCGGCAAGTTCTGCCTCCAGATAGGGCTCGCGTTCTTCACGACCTACCAGC
TGTACTTTCTCCTAGACCGCCTCGGCTTCACCGCAGAAGAAGCAGGCCGGCAGCTGGCCGTCGTCGGTGGGATCTCCCTT
CTCGCCACCATGCTCTTTACGATCGCCGGAGGAACGCTCTCAGACCGCCTGCGTCGGCGAAAGCCCTTCATCTACCTCGC
CTCGGCCATGATCGCCGCCGGAATGATCACCGCCGCCTTCTCCTCCGACTTCGTCATCTACGCCGTCGCGGGCGCGCTGC
TCGCTGCCGGAACCGGGGCTTTCAACTCCGTCGACCTCGCGCTGGCCTCGGATGTGCTTCCTGATAAGGCTGAGAGCGGC
AAGTGGATGTCGATCTATCACCTGTCTGGCGCTCTCTCGACGGCTGTGGGGCCGGCCATCGCCCCACTCGTTCTCTCGAC
GGGCGCCTCCGGCGCGAACTACACCCTGCTCTTCGTCTCCGGAGGCATCCTCGCCCTTGGATCTGTCATCACGGTGATCA
GGGTGCGGGGTGCTCGATGA

Protein sequence :
MSEDERGTRRADSPRNALVNISPLTDPNIEATQREAAGAFGGDPVVTGTSESNEPPRVGAGFVAVYSLTYFGFFLVLFVP
SLFSLAYKVQLIEPEGKEAALGLIVGIGALFNLILGPIFGVLSDATRLRWGRRRPFLVFGLGVAALAACLIAIAPSVPLV
LAGWIIAQVAASAISAALNPTLPERVPAEQRGKLGALSGVAASIAGVSATLVGSLLTGDLVLLFLLPVAVLAVGVVLWLF
VVPDAPAPAGAQRPIGAALRSLLFDPRKHPDFAWVWIGKFCLQIGLAFFTTYQLYFLLDRLGFTAEEAGRQLAVVGGISL
LATMLFTIAGGTLSDRLRRRKPFIYLASAMIAAGMITAAFSSDFVIYAVAGALLAAGTGAFNSVDLALASDVLPDKAESG
KWMSIYHLSGALSTAVGPAIAPLVLSTGASGANYTLLFVSGGILALGSVITVIRVRGAR