PAI Gene Information


Name : CMM_0110 (CMM_0110)
Accession : YP_001220849.1
PAI name : chp/tomA region
PAI accession : NC_009480_P1
Strain : Clavibacter michiganensis NCPPB 382
Virulence or Resistance: Not determined
Product : xylosidase glycosyl hydrolase family protein
Function : -
Note : putative xylosidase (NP_693008.1| xylosidase; arabinofuranosidase [Oceanobacillus iheyensis HTE831]; XYLB_BUTFI Xylosidase/arabinosidase [Includes: Beta-xylosidase (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (
Homologs in the searched genomes :   16 hits    ( 16 protein-level )  
Publication :
    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity", J. Bacteriol. 190 (6), 2138-2149 (2008) PUBMED 18192381.

    -Gartemann,K.H., Abt,B., Bekel,T., Burger,A., Engemann,J., Flugel,M., Gaigalat,L., Goesmann,A., Grafen,I., Kalinowski,J., Kaup,O., Kirchner,O., Krause,L., Linke,B., McHardy,A., Meyer,F., Pohle,S., Ruckert,C., Schneiker,S., Zellermann,E.M., Puhler,A., Eiche, "Direct Submission", Submitted (23-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Linke,B., "Direct Submission", Submitted (10-MAY-2007) Linke B., Center For Biotechnology, Bielefeld University, Universitaetsstrasse 25, 33501 Bielefeld, GERMANY.


DNA sequence :
ATGAGCACCTTCCAAAATCCCGTCCTCACGGGGATGAACCCGGATCCGTCCCTCTGCGCCGTGGGGGATGAGTTTTTCCT
CGTCACGTCGTCGTTCGCGTATTGGCCGGGGATTCCCGTGCACCGCAGCCGGGATCTCGTGCACTGGGAGCAGATCGGTC
ATGTCCTTGACCGGCCGGAGCAGATCGATCTGTCCGGGATCGACACGTCCGATGGGATCTGGGCGCCGACCATCCGGCAT
CACGACGGTATCTTCTACGTCGTCTCCACCGTCGCTCGGGATCGCCGAGGCGGCGTGAACTTCGTGACGACGGCCTTGGA
CGCGGCAGGGCCGTGGATGCAGCCGGTCGTCCTGGACGCCGAGGGCATCGACCCATCCCTGTTCTTCGACGATGACGGAC
GGTGCTGGTTTACCGCCTGTCGGGATGCGGAAGACCCCTTCCTCAGAGGGCCTGCTGAGCTATACATCCAGGAGCTCGAC
CTCGAGACCCTGCAGCTGACCGGGCCGCTACACGTGCTCTGGAACGGTGCTGTCGCCGGCGCATGGGCCGAAGCACCACA
CATCTACAAGCGCGATGGCGTGTACTACCTCATCGCAGCTGAGGGAGGGACGGAGCGAAACCACTCGGTGACCGCGGCCC
GATCTGCGACGGTGACGGGCCCATACCGGACGGACCCACGAAGCCCTCTTCTCACGCACCGGCACCTCGGCCCCGAAGCG
GTCTTCCAGAACGTCGGGCACGCCGACATCGTGGAGACCCCAGCGGGGGAGACATGGGCTCTCGTCCTCGCCACCCGTCC
TCTCGACGGGGCGCACACCCTCGGGCGCGAGGTCTTCCTGGTTCCCGCCGAATGGACCGACGACGGCCTGCTGCTGGCAC
CCGGCTTCGGCCATGTCCGAGAGATGGAGCGTGCCCCGATCAGCATGCTCAGCGACGCCCCCACTCCCGACGCCCCTTCT
GTCGAGCGAGAGCTCTTCGAGGGTGCAGGACTTCCGCCCGGGTGGCGAAGCCTGCGGGGTCCTGTTCGCGGGCAAGAGCA
GGCCTGCGGTGCCGGAGTGTCCCTGAGGGCGTCGTCCGACGATCTCTCGGACCGCGGCACGCCCTCGTTCCTGGCGCGCA
GGCAAGAGCACCAGAGCTTCGAGGCGCGAACGTCCGTGTCCTTCCGCCCGCAATCGTCATCGAACGAAGCTGGTCTGGCG
GTGTTCTATGACGAGCGACACTTCGCGACGCTCGCCGTGACCTTGGATGAGGACGGACGGCCAATTGTGCGCTTCCAGCG
GTCCGGCACTTCGGGCACCAGCGGCGAGGTCGCGGTTACTCCGGACGGCGAGATGCTGCTCCGCGTGATTGGAGACCTTG
ACGCATACGTGTTCTCGTGTTGGGACGAGCGCCAGGGAGACTGGCTCACGCTTGGCAAGGTACCCCGCGCGTGGTTCAGC
ACCGAGCACGCCGGCGGCTTTGTGGGCGTACACGTGGGCCTGTACGCGGTGGGTGCAGGGGAAGACGCCGCCGAAACCGC
CCTGTTTCCCTGGTTCGAGTACATCTCTGCCTCGGGTCAGGCACGGATGCCATCGTCACGCGCCGTGCTCGCTATCAGTT
AG

Protein sequence :
MSTFQNPVLTGMNPDPSLCAVGDEFFLVTSSFAYWPGIPVHRSRDLVHWEQIGHVLDRPEQIDLSGIDTSDGIWAPTIRH
HDGIFYVVSTVARDRRGGVNFVTTALDAAGPWMQPVVLDAEGIDPSLFFDDDGRCWFTACRDAEDPFLRGPAELYIQELD
LETLQLTGPLHVLWNGAVAGAWAEAPHIYKRDGVYYLIAAEGGTERNHSVTAARSATVTGPYRTDPRSPLLTHRHLGPEA
VFQNVGHADIVETPAGETWALVLATRPLDGAHTLGREVFLVPAEWTDDGLLLAPGFGHVREMERAPISMLSDAPTPDAPS
VERELFEGAGLPPGWRSLRGPVRGQEQACGAGVSLRASSDDLSDRGTPSFLARRQEHQSFEARTSVSFRPQSSSNEAGLA
VFYDERHFATLAVTLDEDGRPIVRFQRSGTSGTSGEVAVTPDGEMLLRVIGDLDAYVFSCWDERQGDWLTLGKVPRAWFS
TEHAGGFVGVHVGLYAVGAGEDAAETALFPWFEYISASGQARMPSSRAVLAIS