Name : cagY (HPB8_716)
Accession : YP_003728737.1
PAI name : cag PAI
PAI accession : NC_014256_P1
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein Y
Function : -
Note : Bacterial conjugation TrbI-like protein
Homologs in the searched genomes : 15 hits ( 14 protein-level, 1 DNA-level )
Publication :
-Blom,J., "Direct Submission", Submitted (30-NOV-2009) Blom J., Cebitec, Bielefeld University, Universitaetsstr. 25, 33615, GERMANY.
-Farnbacher,M., Jahns,T., Willrodt,D., Daniel,R., Haas,R., Goesmann,A., Kurtz,S. and Rieder,G., "Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8", BMC Genomics 11, 335 (2010) PUBMED 20507619 REMARK Publication Status: Online-Only.
-Farnbacher,M., Jahns,T., Willrodt,D., Daniel,R., Haas,R., Goesmann,A., Kurtz,S. and Rieder,G., "Direct Submission", Submitted (18-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : |  |
ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAATCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGC
AACAGAAGCCAATCATTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCATCATCTTAACAACCCTACAGAAA
CTAAAACCAATTTTGATGGAGACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCT
AGCAATGGCAGTCTAGCAGACAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACTTTTCACTCAGCAAAA
GAATTTAGATGAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGG
GCTTAATTGATGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATC
AATCACTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAA
TTTTGATGAAGACAAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGTGGTGATGAAACTTCAGAATCTAGCAATGGCA
GTCTAGCAGACAAGTTATTCAAAAAAGCCAGAAAATTAGTTGATAATAAAAGACTTTTCACTCAGCAAAAGAATTTAGAT
GAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGGGCTTAATTGA
TGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCAACAGAGATCAATCACTTTG
AAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCCTTATCTTGATAACCCCACAGAAACTAAAACCAATTTTGATGAA
GACAAGTCAGAAGAAATAACTAACGACTCTAACGATCAAGAAATTATCAAAGGAAGCAAAAAGAAATATATTATTGGTGG
CATTGTAGTCGCTGTTCTTATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTGGAAGATAAAA
GCTCTCGTTTTAGCAAAGACAGGAATCTTTATGTTAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTGAAA
GAACGGAATGAAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTATACAACTATTT
AAATATTGCAGAAATTGAGGACAAAAACCCGTTGAGAGCCTTTTATGAATGTATTAGTAATGGTGGCAACTATGAAGAAT
GTTTGAAGCTTATCAAAGACAAAAAACTTCAAGATCAGATGAAAAAGACTCTAGAGGCTTATAATGACTGCATCAAAAAT
GCCAAAACTGAAGAAGAAAGGATCAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCAACA
AAAAGTTCAAGTGGCGCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGAACGGAAAGAGTGCCTAAAACTCATAAATG
ACCCTGAGATTAGAGAGAAATTCCGTAAGGAATTAGAGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTGTATCAAAAAC
GCCAAAACAGAAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAGCAAGCGCT
AGATTGTTTGAAAAACGCTAAAACTGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTGCAAAAAGAAC
TACTAGCTGATATGAGCGTCAAGGCTTACAAGGATTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAG
AAATTACTCACGCCTGAAGCGAGGAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAACTGATGAAGA
ACGAAAAAAATGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCTAAAGAGAGCGTTAAAGCTTATAAAG
ATTGCGTATCTCAAGCCAAAAACGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAAAAAACTTTTA
GAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCCGAGAAAAAAGAATG
CGAGAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCG
TATCTCAAGCCAAAACTGAAGCCGAGAAAAAAGAGTGTGAGAAATTACTCACCCCTGAAGCGAGAAAAAAGTTAGAAGAA
GCTAAAAAAAGCGTTAAAGCTTATAAAGATTGCGTATCTCAAGCCAAAAACGAAGATGAGAAAAAAGAATGCGAGAAATT
GCTCACCCCTGAAGCGAGAAAACTTTTAGAGCAACAAGCGTTAGATTGTTTGAAAAATGCTAAAACCGATGAAGAACGAA
AAAAGTGTTTGAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGC
GTATCTCAAGCCAAAAACGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACGCCTGAAGCGAGAAAACTCTTAGAAGA
GGCTAAAGAGAGCATTAAAGCTTATAAAGACTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAAT
TGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAA
GCCAAAACTGAAGCCGAGAAAAAAGAGTGTGAGAAATTACTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAGA
GAGCCTTAAAGCTTATAAAGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCC
CTGAAGCGAAAAAACTTTTAGAACAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGT
GTCAAAGATCTCCCTAAAGACCTGCAGAAAAAGGTTTTAGCTAAAGAGAGCGTTAAAGCTTATAAAGACTGCGTATCAAG
AGCTAGGAATGAAAAAGAGAAAAAGGAATGCGAGAAATTACTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGCTAAAG
AGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAACTACTCACG
CCTGAAGCGAGGAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAAC
TGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGAAAGTTCTTAGCGAAGCAAGTGCTAAATTGTT
TGGAAAAAGCTGGAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAGGAAAATGTTTTAGCT
AAAGAGAGTCTTAAAGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTACT
CACCCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGACTGCGTATCAAGAGCTA
GGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAGGAAATTTTTAGCGAAAGAACTCCAACAA
AAAGATAAAGCGATCAAAGATTGCTTGAAAAACGCCGATCCTAACGACAGAGCGGCTATCATGAAGTGTTTGGATGGTTT
GAGCGATGAAGAGAAGCTCAAATACCTGCAAGAAGCTAGAGAAAAGGCTGTCTTGGATTGTTTGAAAACGGCTAGGACCG
ATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGAAATCCAAAATAAAAGGACACAAAGCAAACAA
AATCAATTGAGTAAAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACTGATCAACAAGC
CATAGAGCAATGTTTAGAGGGCTTGAGCGATAGTGAAAGGGCGCTAATTCTAGGAATTAAACGACAAGCTGATGAAGTGG
ATCGGATTTATAGCGATCTAAGAAACCGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCGTTGTTGCCAATGGAT
TTCAAAAATGGCGGCGATATTGCCACTATTAACGCCACTAATGTTGATGCGGACAAAATAGCTAGCGATAATCCTATTTA
TGCTTCCATAGAGCCCGACATTACCAAACAATACGAAACAGAAAAAACCATTAAGGATAAGAATTTAGAAGCTAAATTAG
CTAAGGCTTTAGGTGGCAATAAAAAAGATGACGATAAAGAAAAAAGTAAAAAATCCACAGCAGAAGCTAAAGTAGAAAGC
AATAAGATAGACAAAGATGTCGCAGAAACTGCTAAGAATATCAGTGAAATCGCTCTTAAGAACAAAAAAGAAAAGAATGG
GGAATTTGTAGATGAAAATGGTAATCCCATTGATGACAAAAAGAAAGCAGAAAAACAAGATGAAACAAGCCCTGTCAAAC
AGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACACCCCCATTGAAATCACTCTGACTTCTAAAGTA
GATGCCACTCTCACAGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGCACTATGATCTTACTAGA
TAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACACCTATTATGACACGCTTAATGATAGTCTTTA
CTAAAGCCATTACGCCTGATGGTGTGATAATACCTCTAGCAAACGCTCAAGCAGCAGGCATGTTGGGTGAAGCAGGGGTA
GATGGCTATGTGAATAATCACTTTATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTCTTGCAAAC
TGCGCCTATCATAGCTCTAGATAAACTCATAGGTCTTGGCAAAGGTAGAAGTGAAAGGACACCTGAATTTAATTACGCTT
TGGGTCAAGCTATCAATGGTAGTATGCAAAGTTCAGCCCAGATGTCTAATCAAATTCTAGGGCAACTGATGAATATCCCC
CCAAGTTTTTACAAAAATGAGGGCGATAGTATTAAGATTCTCACAATGGACGATATTGATTTTAGTGGCGTGTATGATGT
TAAAATTACCAACAAATCTGTGGTAGATGAAATTATCAAACAAAGCACTAAAACTTTGTCTAGAGAACATGAAGAAATCA
CCACAAGCCCCAAAGGTGGCAATTAA
|
| Protein sequence : | |
MNEENDKLETSKKIQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLNNPTETKTNFDGDKSEETQTQMDSGGDETSES
SNGSLADKLFKKARKLVDNKRLFTQQKNLDEETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEI
NHFEDSSKESKESSDPYLDNPTETKTNFDEDKSEETQTQMDSGGDETSESSNGSLADKLFKKARKLVDNKRLFTQQKNLD
EETQELNEEDDQENNGYQEETQTGLIDDETSKKTQQHSPQDLSNEEATEINHFEDSSKESKESSDPYLDNPTETKTNFDE
DKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLLK
ERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIKN
AKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIKN
AKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSKARNEKEKQECE
KLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDCVSQAKNEAEKKECEKLLTPEAKKLL
EEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKTEAEKKECEKLLTPEARKKLEE
AKKSVKAYKDCVSQAKNEDEKKECEKLLTPEARKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLDC
VSQAKNEAEKKECEKLLTPEARKLLEEAKESIKAYKDCVSKARNEKEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQ
AKTEAEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRC
VKDLPKDLQKKVLAKESVKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLT
PEARKLLEQEVKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKFLAKQVLNCLEKAGNEEERKACLKNLPKDLQENVLA
KESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPEARKFLAKELQQ
KDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQSKQ
NQLSKTERLHQASECLDNLDDPTDQQAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRNRKTFDNMAAKGYPLLPMD
FKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKVES
NKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKV
DATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGV
DGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIP
PSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN
|
|
