PAI Gene Information


Name : REQ_18410 (REQ_18410)
Accession : YP_004006593.1
PAI name : rpl
PAI accession : NC_014659_P1
Strain : Rhodococcus equi 103S
Virulence or Resistance: Not determined
Product : type iv secretion system atpase subunit
Function : -
Note : -
Homologs in the searched genomes :   594 hits    ( 594 protein-level )  
Publication :
    -Letek,M., Gonzalez,P., Macarthur,I., Rodriguez,H., Freeman,T.C., Valero-Rello,A., Blanco,M., Buckley,T., Cherevach,I., Fahey,R., Hapeshi,A., Holdstock,J., Leadon,D., Navas,J., Ocampo,A., Quail,M.A., Sanders,M., Scortti,M.M., Prescott,J.F., Fogarty,U., Mei, "The genome of a pathogenic rhodococcus: cooptive virulence underpinned by key gene acquisitions", PLoS Genet. 6 (9) (2010) PUBMED 20941392 REMARK Publication Status: Online-Only.

    -Letek,M., Ocampo-Sosa,A.A., Sanders,M., Fogarty,U., Buckley,T., Leadon,D.P., Gonzalez,P., Scortti,M., Meijer,W.G., Parkhill,J., Bentley,S. and Vazquez-Boland,J.A., "Evolution of the Rhodococcus equi vap pathogenicity island seen through comparison of host-associated vapA and vapB virulence plasmids", J. Bacteriol. 190 (17), 5797-5805 (2008) PUBMED 18606735.

    -Letek,M., Ocampo-Sosa,A.A., Sanders,M., Fogarty,U., Buckley,T., Leadon,D.P., Gonzalez,P., Scortti,M., Meijer,W.G., Parkhill,J., Bentley,S. and Vazquez-Boland,J.A., "Direct Submission", Submitted (12-NOV-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Vazquez-Boland,J.A., "Direct Submission", Submitted (21-OCT-2009) Vazquez-Boland J.A., University of Edinburgh, Centre for Infectious Diseases, Edinburgh, EH9 3JT, UNITED KINGDOM.


DNA sequence :
ATGAGACTGTCCCAACGGCTCGAGGCCGTGCGCGGAGCCGCACCCGTCGAAGCCGCCGCACCGATCCCGCCGGGGAAGCA
GGGGAAGGCGAAAACGTCCCTCCCTCCGGCCGACGCTCTCGCCGAACTGAAGGACCGTGCGAGTGCGGCCCTGTACACCC
GGATCGGCACCCGCTTCAACGACTCCTCGTTGAGCGAGGAGCAACTGCATCTCCTGGTCCGTGAGGAACTGGCCGAAATC
GTGGAGCAGGAGACGACGCCACTCACCTTCGACGAACGGCAGCGCCTGCTCCGTGAGGTTGCCGACGAGGTACTGGGGCA
CGGACCGCTCCAGCGGCTACTGGAGGACCCGTCGGTCACCGAGATCATGGTCAACAGCCACGACATGGTCTACGTCGAGC
GGGACGGCACCCTCGTCCGCAGCTCCGCGCGATTCGCGGACGAGGCGCACCTGCGTCGCGTGATCGAACGCATCGTTTCC
GCCGTCGGTCGACGGATCGACGAATCGTCCCCGCTCGTGGATGCACGCTTGGCGGATGGCTCCCGTGTCAACGCGGTGAT
CCCACCGCTCGCATTCAACGGCTCCTCGCTCACCATTCGAAAGTTCTCGAAAGATCCGTTCCAGGTCGACGATCTCATCG
CCTTCGGCACTCTCTCGCACGAGATGGCCGAACTGCTCGACGCGTGTGTGCAGGCGCGACTGAACGTCATCGTCTCGGGC
GGCACGGGCACGGGGAAGACGACGCTGCTCAACGTGCTCTCGTCGTTCATTCCGGAAGGGGAGCGGATCGTCACCATCGA
GGACGCCGTGGAACTGCAACTTCAGCAGGACCACGTCGTACGGTTGGAGAGCCGACCGCCGAACATCGAGGGCAAGGGTG
CCGTCACCATCCGCGACCTGGTGCGGAACTCGCTGCGTATGCGTCCCGACCGCATCGTGGTGGGGGAGTGTCGCGGAGGC
GAGAGTCTCGACATGCTGCAAGCGATGAACACCGGTCACGACGGGTCGCTGTCGACGGTGCATGCGAATTCGCCCCGTGA
CGCCATCGCGCGCTTGGAGACGCTCGTGTTGATGGCCGGCATGGACCTGCCGTTGCGGGCGATCCGGGAGCAGATTGCTT
CGGCGGTCGACGTGATCGTGCAGCTCACTCGACTACGTGACGGCACTCGGCGAGTGACCCACGTGACCGAGGTCCAGGGC
ATGGAGGGTGAGATCGTCACCCTGCAGGATGCCTTCCTGTTCGACTACAGCGCCGGCGTCGACGCGCGCGGGCGATTCCT
CGGCAGACCGCAGCCGACCGGAGTGCGGCCGCGGTTCACCGACAGATTCCGAGATCTCGGTATTGCTTTGTCGCCGAGTG
TTTTCGGGGTGGGAGAACCCTCCCGGGGGCGGGTATGA

Protein sequence :
MRLSQRLEAVRGAAPVEAAAPIPPGKQGKAKTSLPPADALAELKDRASAALYTRIGTRFNDSSLSEEQLHLLVREELAEI
VEQETTPLTFDERQRLLREVADEVLGHGPLQRLLEDPSVTEIMVNSHDMVYVERDGTLVRSSARFADEAHLRRVIERIVS
AVGRRIDESSPLVDARLADGSRVNAVIPPLAFNGSSLTIRKFSKDPFQVDDLIAFGTLSHEMAELLDACVQARLNVIVSG
GTGTGKTTLLNVLSSFIPEGERIVTIEDAVELQLQQDHVVRLESRPPNIEGKGAVTIRDLVRNSLRMRPDRIVVGECRGG
ESLDMLQAMNTGHDGSLSTVHANSPRDAIARLETLVLMAGMDLPLRAIREQIASAVDVIVQLTRLRDGTRRVTHVTEVQG
MEGEIVTLQDAFLFDYSAGVDARGRFLGRPQPTGVRPRFTDRFRDLGIALSPSVFGVGEPSRGRV