PAI Gene Information


Name : spaF (CDHC03_0161)
Accession : YP_005137210.1
PAI name : Not named
PAI accession : NC_016787_P1
Strain : Corynebacterium diphtheriae 241
Virulence or Resistance: Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
Note : Predicted outer membrane protein
Homologs in the searched genomes :   3 hits    ( 3 protein-level )  
Publication :
    -Trost,E., Blom,J., Al-Dilaimi,A., Schroeder,J., Soares,S.C., Dorella,F.A., Rocha,F.S., Miyoshi,A., Azevedo,V., Schneider,M.P., Silva,A., Camello,T.C., Sabbadini,P.S., Santos,C.S., Santos,L.S. Jr., Hirata,R., Mattos-Guaraldi,A.L., Efstratiou,A., Schmitt,M., "Direct Submission", Submitted (05-JAN-2012) CeBiTec, Bielefeld University, Universitaetsstr. 27, Bielefeld 33615, Germany.

    -Trost,E., Blom,J., de Castro Soares,S., Huang,I.H., Al-Dilaimi,A., Schroder,J., Jaenicke,S., Dorella,F.A., Rocha,F.S., Miyoshi,A., Azevedo,V., Schneider,M.P., Silva,A., Camello,T.C., Sabbadini,P.S., Santos,C.S., Santos,L.S., Hirata,R. Jr., Mattos-Guaraldi, "Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia", J. Bacteriol. 194 (12), 3199-3215 (2012) PUBMED 22505676.

    -Trost,E., Blom,J., de Castro Soares,S., Huang,I.H., Al-Dilaimi,A., Schroder,J., Jaenicke,S., Dorella,F.A., Rocha,F.S., Miyoshi,A., Azevedo,V., Schneider,M.P., Silva,A., Camello,T.C., Sabbadini,P.S., Santos,C.S., Santos,L.S., Hirata,R. Jr., Mattos-Guaraldi, "Direct Submission", Submitted (06-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
ATGAATAATTATAAAAAACCAGTAATTATGAGCACGGTTTTTGGGAAGCTTATAGCTTTTATGCTTGTAGTGACTATTGG
TGTTGTGTCGCCTGCTTTGGCTTTAGCTACTGAAGATCAAATCGAAAATGAGACCGATCTAATTTCTGGGCAAACTAGTG
AATCCGAAGCAGAACAAGAAGTTGCGGATGAAGAGACACAAAATCCTTCCCCAAAGGATAATCCTGCACAATATAAGGTA
GAAACCGCTGAAATCGACGGACGCACTGTTAACTTAGTAAAAATTCCAGTAGAGAATATTGATCAAAATCAAAAAATTCT
TACCTTTGAGCGCCAAGGGGCAGAGACAGAATTCTTTGGACACGGGGACGCTCAGCTAGACGGCATTAAAATTGATGCCG
ATAAACTGGCCTCAGCCCCAGCGATGGACAATAGTGGAATTCTTATTTCTATTAAAATATCCGATCTTTCTCTCCGCGAC
GCAAAAGAGCTGACGTTTACTTACTCTACCTCTCCTAGCGTAGATAAAGATGCTGCCTGGAATATCTCCACTTCTCAAGT
GAATGCTTTTAGTATCTACGATAATTTGCCTGACAAAGTAACGGTTATCGATCCCACTATCGGCAACCAGAACTCTGTGA
CTGTACGTCCTGATCAGATTCAAGTTCCTGATAAAACGCTTTTTGATAACGGGAAATGCAAAAATTCTTGGGTCAATAAT
GTTTTTTTCTATGCGCCTGAAAACATTAATGCAAATAAAATAATTTTGAAACCTAAAAGGGCTCCTAGGTTGTATGAGCC
TCCAGTTGATACCTTTAACCACGATACGTCAAATATAAAGGTAGCGGAGCATGAGCGAATGTTTCGCAATGAATACAAAC
CCCTCTGGGAGGATATTCGCCGAAATGATATTTCCGTAACAAAAGTTGACGAATATTTGGAAGTTAATATTCCGCAAGGA
ATAAAAATGGAAAAAGGTGAGTATGTAAAGCTCACTAATGTTTTCTCTTCTTGTTACTCTAGCGTGCTAACCCCTTCGGA
TATTGAGATTCAAGTTATTGGTGAAACTCGAATTGGTGGATTCTGCGAGGATCGTGCTCGGTACACTTTTCCAGCACGTG
ATAACATTACAAGTCAGCAGCGGCGGGTCATCGCTGTAACTGGAGATGGTGCAGGAGCTTTAACTGGACAACCGTATTCT
TCATTAAAGGAAGTATCGGAGAAAGACACCGGGAAAACCCCTTATTCCGTTCTATATACGCCAATCCCTGGTAAGCAAGA
GTACGTTCTTCGTAATCTTCCTTACCATGATCCTTCAGGGAAATTTGTCAGTGGCGATAATGTAGTGAGCAGAAAAGCTC
CTCGTGAATTAACGCAAACGGAGAAAGACAATGGTACGAACGTTTTTGTTAGTGAGTCACAACCAAACGCTCAGATACGT
TGGAAGTCGTACATTGCTCGGCAAGACGCAGGTACTGGTAAGTTTGCTCGATTAGGTGGGCCAAATCAAGAATCTGGTTG
GATTGTTAATGCACTAGCATACAACCCAAATGATAATTGGTTGTATGCAATTAGTCAGGGACGTCTTGGTGAAAACTGGG
GAAGGGATTCTGATAGGCAGACTTTCCAAGGCCAATCAGGTCAATGGCGTGCTGTAATCACGGCTGAAGACCCCTGTTAT
CCAGCAGGGCATCTTCTTCAGATCGATCCAGTATCTGGGGAAGTGTATAACTTGGGTCGTGTCACCAAGAATGCGTCTGA
TACCGATTACGCATTTGAAGGTACTCCCCATCGCACTTGGCCAAATGATCTTTGGGGTGGAATCAATGTCGGCTCCATTG
GACAAGACGGTAATTTTTACGTAGCAAATGCTTCTCTTTCAGGTACTGGTGCCGTTTATAAAGTCAACTTGGAAAATGTA
ACTGCAGAGCTATTGCCACAGTCATCGCAATGGCTTAAAAAAGGTATCCGATATTCAGGGGACTGGTACGCTGCAGGAAA
TAATACTGTCGGTCGTGCATGGTCAGAAGACTGGACTCCGCTATATGTTCCTAATCCAGATAAAGAAGGGGAACAACGCC
AAGCTGGAAACTATATGTGGGGAATAACCAATGGTTGGAACTCGGGATTAAATAAGGATGACGTATTCATTGAGCGTATT
AACTTATACACTGGAGTGACTGAACGGTGGTCCATTGGTAACAAGCGTACTAAAGCTGGACAGTCTATTAAAAGACCACA
TCAATGGGGCAGAGCTTGGGCATATGGTAATGGAATTTTGGGCTTTGCAACTGCGAGTTCTGGTGCCAACGGCGACGTTC
TTCAAATCAAGGTGATTAATCCAGAAGCCTCACAACCAGAATTTGAATTGCTATCTGTTAACGCAATTGCTCAGGCGTCA
TACAACTCGAATGGCACTAGTTCAATCAATAAAAAAGAGAACGTTGTTGATCTCGCGATTAGAAAAACTCGTCGTGATGT
AGAGCCACGCAATGGTAAGCCACGCGTGGAATGGGATATTGAAGTAAGTAACCTGAGTAAAGACGCTGCCAGCTCTGGTT
TCACTGTGTTCGACACTATTCCGCAGGGGTATAAAGTAGTCGAGCTAAAAGCTGCTCAAGATGAATCAAAGCCCAATGGT
GCTTTCGTGACAGTTCAAATATCAAGAGACAAAGCCGTTCTTGTTGGGCAGCATTGGTCGGCATATCTAGGTCACCCTAA
AGACAATGATGTCATTGAAGCAAAATTTGGTGCGCTAAAGCCTGGCGCAAAAACCAAACTTACTATCGTGGCAGAACCAG
AAAATGGTAGATCTTTACCCGCACAGTGCGTTGAAAACGTTGCTGGAGTGATCGGCCTTGATCGCGATCCAAATACTAAA
AAATTGGAACTTGAATCTGATGGTAAAGATGCTTTTGGTAATTCGGCTTCATACTATGGGGATTTGGACTACATTGGACG
TGAGTTCTCGGATGTTACTTCCGACAGCTATTGCCGTGGTCGTTTGACCGTGATCAAGAATACACGCGTAGATGGCAAGA
CTGAACAGCGCGTGAACGGCTGGAATTTCACCGCAAAAACGTCCAACACAGTGCTCTTAGATGCAGCCATCCCAGATTCT
GAGGGTCTGGCCGAATCGAAGTTAACTACAGGTGCTAATGGTCATTCCAAAGGACAAGTCTCTTGGATCATTCAGTCCAG
TGACGAACAAACCGTTAACGTAAAAGAACATTTGGAAGAACACGAGGGCTTCAAACTGGAATCCGTCAAATGCTATGACC
AAGAGAATCCAAGTAAAGAAATTTCGATTAAACGCACTATTGATTCCAATGGTCAGATCACTGATTTTAGTGTGACTTTG
AAACCAAACGCTAAGAAACAACTGCCACAGATCTCTTGTGAAGTTACCAACGTAAATGATCCACAAGCTGGTGAACTATG
GCTTAAAAAAGCCAGTTATAATCCAGAAAAAGGTACTATTAACGATGATGATCTAGACGGTTGGAAGTTTACCGTTACTT
CTGATTCTGATCCCACGATTGTTCAAGAGCTCAGTAAAGAAAAACCAAACTTTCCTGTGAAATCAGGCTCTTACACTATT
GTGGAAACTCAATCTCCTAGTGGCTATAGTCTGTTAGCGCAGCCGATTAAGATTACGATCGGAATCATTGAAGGCAAGCG
CCTCGGCATTACCTCTTTGAAGGATGCTTCGGGCTTAGTGGAGTTTGACAATCCAAGTGATGAGCATCCGCATATTCTCT
TAACGGTCGCAGATGTTAAGAACGGAACGCTTCCTAAAACAGGCGGTTATGGTGTCGCTCCGTGGGTAGTGTTCGGTACT
GCGTTGATTATCTTGGCAATTTTGATAAATACGCGACGTAAAAACCGAAACTCTCATACGGCATAA

Protein sequence :
MNNYKKPVIMSTVFGKLIAFMLVVTIGVVSPALALATEDQIENETDLISGQTSESEAEQEVADEETQNPSPKDNPAQYKV
ETAEIDGRTVNLVKIPVENIDQNQKILTFERQGAETEFFGHGDAQLDGIKIDADKLASAPAMDNSGILISIKISDLSLRD
AKELTFTYSTSPSVDKDAAWNISTSQVNAFSIYDNLPDKVTVIDPTIGNQNSVTVRPDQIQVPDKTLFDNGKCKNSWVNN
VFFYAPENINANKIILKPKRAPRLYEPPVDTFNHDTSNIKVAEHERMFRNEYKPLWEDIRRNDISVTKVDEYLEVNIPQG
IKMEKGEYVKLTNVFSSCYSSVLTPSDIEIQVIGETRIGGFCEDRARYTFPARDNITSQQRRVIAVTGDGAGALTGQPYS
SLKEVSEKDTGKTPYSVLYTPIPGKQEYVLRNLPYHDPSGKFVSGDNVVSRKAPRELTQTEKDNGTNVFVSESQPNAQIR
WKSYIARQDAGTGKFARLGGPNQESGWIVNALAYNPNDNWLYAISQGRLGENWGRDSDRQTFQGQSGQWRAVITAEDPCY
PAGHLLQIDPVSGEVYNLGRVTKNASDTDYAFEGTPHRTWPNDLWGGINVGSIGQDGNFYVANASLSGTGAVYKVNLENV
TAELLPQSSQWLKKGIRYSGDWYAAGNNTVGRAWSEDWTPLYVPNPDKEGEQRQAGNYMWGITNGWNSGLNKDDVFIERI
NLYTGVTERWSIGNKRTKAGQSIKRPHQWGRAWAYGNGILGFATASSGANGDVLQIKVINPEASQPEFELLSVNAIAQAS
YNSNGTSSINKKENVVDLAIRKTRRDVEPRNGKPRVEWDIEVSNLSKDAASSGFTVFDTIPQGYKVVELKAAQDESKPNG
AFVTVQISRDKAVLVGQHWSAYLGHPKDNDVIEAKFGALKPGAKTKLTIVAEPENGRSLPAQCVENVAGVIGLDRDPNTK
KLELESDGKDAFGNSASYYGDLDYIGREFSDVTSDSYCRGRLTVIKNTRVDGKTEQRVNGWNFTAKTSNTVLLDAAIPDS
EGLAESKLTTGANGHSKGQVSWIIQSSDEQTVNVKEHLEEHEGFKLESVKCYDQENPSKEISIKRTIDSNGQITDFSVTL
KPNAKKQLPQISCEVTNVNDPQAGELWLKKASYNPEKGTINDDDLDGWKFTVTSDSDPTIVQELSKEKPNFPVKSGSYTI
VETQSPSGYSLLAQPIKITIGIIEGKRLGITSLKDASGLVEFDNPSDEHPHILLTVADVKNGTLPKTGGYGVAPWVVFGT
ALIILAILINTRRKNRNSHTA