PAI Gene Information


Name : join (SAMSHR1132_16680)
Accession : YP_005326178.1
PAI name : vSa_beta
PAI accession : NC_016941_P2
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : integrase (fragment)
Function : -
Note : -
Homologs in the searched genomes :   4 hits    ( 3 protein-level,   1 DNA-level )  
Publication :
    -Holt,D.C., Holden,M.T., Tong,S.Y., Castillo-Ramirez,S., Clarke,L., Quail,M.A., Currie,B.J., Parkhill,J., Bentley,S.D., Feil,E.J. and Giffard,P.M., "A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin", Genome Biol Evol 3, 881-895 (2011) PUBMED 21813488.

    -Holt,D.C., Holden,M.T., Tong,S.Y., Castillo-Ramirez,S., Clarke,L., Quail,M.A., Currie,B.J., Parkhill,J., Bentley,S.D., Feil,E.J. and Giffard,P.M., "Direct Submission", Submitted (27-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
GTGACATCATTTACTATTACAAAAAGGCAGAATAAAACGTCAACATCTTGGCAATACGATGTAAATCATCCGTCTTTCAA
ATCAGGAAGGAAAAGAAATTCAGGCTTCAAAACTAAAGCAGAGGCAACCAACGTCGCACAACAATTGTTTAGAGATTTGG
AGGATGATAATAACATTGAAGATAATAAAAAGTTTACAGAATATTACAGTGACTGGATAAATTTAAAGTATAAAAAAAGT
TATCCAGCAAACCGTTTTATTGGTATGAAAGATCCATTAGGATATTTAGCAAGTTTTCCGGAGAAAACATGCTAATAAAA
AATATAACACGAAGTGAATATCAGAGGTTTTTAAATAAATACGCACAAGGCCATAACGATGAAACTGTGAGAGAGATTCA
TGGTTGTTTAGCAAGATGTATCGGAGACGCATTATATGATGGCAATTTTAAAAAAGACCCTACCTATGACGTTAGTATCA
AAGGCACTGAAAAAGCTATAGATGAGAATTTTAAGTATTTAACGATTAAAGAATACTTAAAATTACTAGAGTACTTTAAA
AAGGAGATGAAGAAAGTTAAATTTTCTGTATCTATTGGGTATTACTGGTGCAAGATATAGAGTTGTTATCAATATGACTT
ACAATGATTTAAGCAAAGAAAATGGTATAGTTCATTTACCAGGAACAAAAACAAAGAATTCAAAACAAGAAGTTGAAGTT
AATTCAAGAGATATTATACACATAAATTCAAAGTTAGCTAGATTACCAAATAGAATTAACGGAAAATTATTTTCGGTTAT
TCATACATTGGTGAGTAAATCATTAAAAAAATCAAAAGAAGTAATAGAATTAAATAATGATTATATCACTCCCTATTCAC
TTAGACACACTCACAAATCTTCTTTGCTATCCAAAGCCATACCGATTGAATATATGAGCAAACGATTAGGTCACTCTAGA
ATATCATAA

Protein sequence :
MTSFTITKRQNKTSTSWQYDVNHPSFKSGRKRNSGFKTKAEATNVAQQLFRDLEDDNNIEDNKKFTEYYSDWINLKYKKL
SSKPFYWYERSIRIFSKFSGENMLIKNITRSEYQRFLNKYAQGHNDETVREIHGCLARCIGDALYDGNFKKDPTYDVSIK
GTEKAIDENFKYLTIKEYLKLLEYFKKEMKRKLNFLYLLGITGARYRVVINMTYNDLSKENGIVHLPGTKTKNSKQEVEV
NSRDIIHINSKLARLPNRINGKLFSVIHTLVSKSLKKSKEVIELNNDYITPYSLRHTHKSSLLSKAIPIEYMSKRLGHSR
IS