Name : hsdM1 (SACOL0476)
Accession : YP_185366.1
PAI name : vSa_alpha
PAI accession : NC_002951_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : type I restriction-modification system, M subunit
Function : -
Note : identified by match to protein family HMM PF02384; match to protein family HMM PF02506; match to protein family HMM TIGR00497
Homologs in the searched genomes : 432 hits ( 432 protein-level )
Publication :
-Gill,S.R., Fouts,D.E., Archer,G.L., Mongodin,E.F., Deboy,R.T., Ravel,J., Paulsen,I.T., Kolonay,J.F., Brinkac,L., Beanan,M., Dodson,R.J., Daugherty,S.C., Madupu,R., Angiuoli,S.V., Durkin,A.S., Haft,D.H., Vamathevan,J., Khouri,H., Utterback,T., Lee,C., Dimi, "Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain", J. Bacteriol. 187 (7), 2426-2438 (2005) PUBMED 15774886.
-Gill,S.R., Fouts,D.E., Archer,G.L., Mongodin,E.F., DeBoy,R.T., Ravel,J., Paulsen,I.T., Kolonay,J.F., Dodson,R.J., Durkin,A.S., Brinkac,L., Beanan,M., Daugherty,S.C., Madupu,R., Angiuoli,S.V., Haft,D.H., Vamathevan,J., Khouri,H., Utterback,T., Lee,C., Dimi, "Direct Submission", Submitted (12-NOV-2004) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
-Gill,S.R., Fouts,D.E., Archer,G.L., Mongodin,E.F., DeBoy,R.T., Ravel,J., Paulsen,I.T., Kolonay,J.F., Dodson,R.J., Durkin,A.S., Brinkac,L., Beanan,M., Daugherty,S.C., Madupu,R., Angiuoli,S.V., Haft,D.H., Vamathevan,J., Khouri,H., Utterback,T., Lee,C., Dimi, "Direct Submission", Submitted (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : |  |
ATGTCTATTACTGAAAAACAACGTCAGCAACAAGCTGAATTACATAAAAAATTATGGTCGATTGCGAATGATTTAAGAGG
GAATATGGATGCGAGTGAATTCCGTAATTACATTTTAGGCTTGATTTTCTATCGCTTCTTATCTGAAAAAGCGGAACAAG
AATATGCAGATGCCTTGTCAGGTGAAGACATCACGTATCAAGAAGCATGGGCAGACGAAGAATACCGTGAAGACTTAAAA
GCAGAATTAATTGACCAAGTCGGTTACTTCATTGAGCCAGAAGATTTATTCAGTGCGATGATTCGTGAAATTGAAACGCA
AGATTTCGATATCGAACACCTGGCGACGGCAATTCGTAAAGTTGAAACATCAACATTAGGTGAAGAAAGTGAAAATGACT
TTATCGGTCTGTTCAGCGATATGGATTTGAGTTCAACGCGACTAGGTAACAATGTCAAAGAACGTACTGCTTTAATCTCT
AAAGTCATGGTTAATCTTGACGACTTACCATTCGTTCACAGTGACATGGAAATTGATATGTTAGGTGATGCATATGAATT
CCTAATTGGGCGCTTTGCGGCGACAGCGGGTAAAAAAGCAGGCGAGTTCTATACACCACAACAAGTATCTAAGATACTGG
CGAAGATTGTCACAGACGGTAAAGATAAATTACGTCACGTGTATGACCCAACATGTGGTTCAGGTTCACTGTTGTTACGT
GTTGGTAAAGAAACACAAGTGTATCGTTATTTCGGTCAAGAACGTAACAATACTACATACAACTTAGCACGCATGAATAT
GTTATTACATGATGTGCGTTATGAGAACTTCGATATCCGTAATGATGACACATTGGAAAACCCAGCCTTTTTAGGCAATA
CATTTGATGCGGTTATTGCGAACCCACCGTATAGTGCGAAATGGACTGCAGATTCAAAGTTTGAAAATGACGAACGATTC
AGTGGTTACGGCAAACTTGCGCCTAAGTCTAAAGCAGACTTTGCCTTTATTCAACACATGGTACATTACCTAGACGATGA
AGGTACCATGGCCGTTGTACTCCCACATGGTGTATTATTCCGAGGTGCTGCAGAAGGTGTCATTCGTCGTTATTTAATTG
AAGAAAAGAACTACTTAGAAGCTGTGATTGGTTTGCCAGCGAATATTTTCTATGGGACAAGTATTCCAACATGTATTTTA
GTATTTAAAAAATGTCGCCAACAAGACGACAACGTACTATTTATCGATGCATCCAATGATTTTGAAAAAGGAAAAAATCA
AAATCATTTAAGCGATGCCCAAGTCGAACGTATTATAGACACATATAAGCGTAAGGAAACAATTGATAAATATAGCTACA
GCGCGACACTACAAGAGATTGCCGATAACGATTACAACCTAAATATACCGAGATATGTCGATACATTCGAAGAAGAAGCA
CCGATTGATTTAGATCAAGTCCAACAAGATTTGAAAAATATCGATAAAGAAATCGCAGAAATTGAGCAAGAAATCAATGC
ATACCTGAAAGAACTTGGGGTGTTGAAAGATGAGTAA
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| Protein sequence : | |
MSITEKQRQQQAELHKKLWSIANDLRGNMDASEFRNYILGLIFYRFLSEKAEQEYADALSGEDITYQEAWADEEYREDLK
AELIDQVGYFIEPEDLFSAMIREIETQDFDIEHLATAIRKVETSTLGEESENDFIGLFSDMDLSSTRLGNNVKERTALIS
KVMVNLDDLPFVHSDMEIDMLGDAYEFLIGRFAATAGKKAGEFYTPQQVSKILAKIVTDGKDKLRHVYDPTCGSGSLLLR
VGKETQVYRYFGQERNNTTYNLARMNMLLHDVRYENFDIRNDDTLENPAFLGNTFDAVIANPPYSAKWTADSKFENDERF
SGYGKLAPKSKADFAFIQHMVHYLDDEGTMAVVLPHGVLFRGAAEGVIRRYLIEEKNYLEAVIGLPANIFYGTSIPTCIL
VFKKCRQQDDNVLFIDASNDFEKGKNQNHLSDAQVERIIDTYKRKETIDKYSYSATLQEIADNDYNLNIPRYVDTFEEEA
PIDLDQVQQDLKNIDKEIAEIEQEINAYLKELGVLKDE
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