REI Gene Information


Name : unnamed
Accession : BAH57703.1
REI name : Type-VII SCCmec
REI accession : AB462393
Strain : Staphylococcus aureus 04-02981
Resistance or Virulence: Not determined
Product : hypothetical protein
Function : -
Note : ORF No.36
Homologs in the searched genomes :   5 hits    ( 5 protein-level )  
Publication :
    -Higuchi,W., Takano,T., Teng,L.J. and Yamamoto,T., "Structure and specific detection of staphylococcal cassette chromosome mec type VII", Biochem. Biophys. Res. Commun. 377 (3), 752-756 (2008) PUBMED 18926798.

    -Takano,T., Higuchi,W., Otsuka,T., Baranovich,T., Enany,S., Saito,K., Isobe,H., Dohmae,S., Ozaki,K., Takano,M., Iwao,Y., Shibuya,M., Okubo,T., Yabe,S., Shi,D., Reva,I., Teng,L.J. and Yamamoto,T., "Novel characteristics of community-acquired methicillin-resistant Staphylococcus aureus strains belonging to multilocus sequence type 59 in Taiwan", Antimicrob. Agents Chemother. 52 (3), 837-845 (2008) PUBMED 18086843.

    -Yamamoto,T. and Higuchi,W., "Direct Submission", Submitted (28-SEP-2008) Contact:Tatsuo Yamamoto Niigata University Graduate School of Medical and Dental Sciences, Division of Bacteriology, Department of Infectious Disease Control and International Medicine; 757 Ichibanchou, Asahimachidori, Niigata, Nii.


DNA sequence :
GTGCAATTCGATGGGTGTGTGAATAATATGATTATTAATGCTCAAACGAAATTAAATATAGAACAAGATTTTAAAATACA
GGCTGGTCCTGGTGCTGGAAAAACAGAATTTTTGGTGAATCATATCAAAAATGTAATACAAACTTCTGAAAAGCTCGAAC
GTATGAAGAAAATAGCGTGTATTACTTATACGAATACGGCTGCTCAGACAGTTTTACAAAGATTAGGAAAAAGTGTTTCA
AATAGAGTAGATATATCTACAATACATAGCTTTTTGTATAGAAACGTAGTTAAACCATATTGTTCTTTTCTACCCAAAGA
ATACGGAATTTGTGTGCAAAAATTAAAAGGACATAGTGATCCAATTGTGATTAACAAATATGTAAATGCATGGTTAAAAA
CTGAATATTTTACGAAATTAAAACCGCCTAGTAATAGAAATCAACTACTAAAAATGCCAGTACTAAAGAAAGCTTTGCAA
AACTGGCTACTATCTATGAAACTTTCTTACGAAAATAATGATGTGCAATTTATTTGTGATAATACCAAAGCTCAAGCAAT
TGATAAAAAAAGTAAAAAAAGAATGGGAATAAATAAATCAAACTTAAATATACTAGAAAAGCAATTATTAAATTATAAAA
AAATATATTGGGAGAAAGGAATTATCGATCATGATGATGTTTTGTTTTTTTCATATGTATTAATTAGAGATTACCCATTC
ATTCTCACTATTTTATGTGCTAAATATCCCTACTTTTTTATAGATGAATTTCAAGATACTAGTCAATTACAAGATTTTAT
TATAGATAAAATAAGACAGAAAGGCTGCATAGTGGGGGTTATTGGCGATAAGGCACAGGCAATTTACAGCTTTCAAGGTG
CACGGGTTTCCTTATTTGAGAAGTTTAAAGTTGATTTAATAAATTCTCACACTATCTTAGAAAATCATAGAAGTTCATAT
CAAATAGTTACTTTTTTAAATAGTATCAGAGAAGATATTACTCAAACAGTATATAGTGGTATTGAAAATGATAAAGTTAC
AATTTTGATTGGAAATCGGATTCGCAGTTATACTAAGGTAGTTAATATTTGTAACAAGGAGTCACTTGTTACCTTGTCAA
GAGATAATATTACTTCTAATGCAATGAGAATAAAGTTGGAAGGAAATAATTTTGATAAAAAGTTATTGGAAAAATTTCAA
GAAATTGATAGTAATAGTAAAAGAAGGAATACTATTATTTCGCTTATAAAAGCTATTGAATTAGCTAAGAATACTAAATA
TAAAGATGCCTTAAAAATAGTCGAATCGATTTATAAAGATGAAAATAATCCTAAAAAAATAGCTCTTAATTCTCTAATAA
ATATGATTAATAAATATGATAAATACGGTAATGGTACATTAATGAATTTCTACAATACTTTATGTAAAACTTTAGATATT
AAACTTTCAGGGTTTAGAAAGGGGCAAGTAAAAGATTTTTACGAAAACACTTTATATAAAAATATGGTGATATGTACAAA
TATCGTTGAAGACACAAGTAATCATATTACTATCCACAAAGCGAAAGGCGCAGAATTCGAAAATGTATTTGTTATAGGTA
ATAAAGACACTTTAAGTCTACTTTTGAAACCAGATTTAATGAACGATGAAGAGCATCGTATATTCTATGTAGCTATGAGT
CGAGCAAAGAAGAAACTTTTTTTACAATTTGATTATCTTGATAATAATGAACAAAAGAAAATTAAGGAACGTTATGATGT
AAGTATTATACAATAA

Protein sequence :
MQFDGCVNNMIINAQTKLNIEQDFKIQAGPGAGKTEFLVNHIKNVIQTSEKLERMKKIACITYTNTAAQTVLQRLGKSVS
NRVDISTIHSFLYRNVVKPYCSFLPKEYGICVQKLKGHSDPIVINKYVNAWLKTEYFTKLKPPSNRNQLLKMPVLKKALQ
NWLLSMKLSYENNDVQFICDNTKAQAIDKKSKKRMGINKSNLNILEKQLLNYKKIYWEKGIIDHDDVLFFSYVLIRDYPF
ILTILCAKYPYFFIDEFQDTSQLQDFIIDKIRQKGCIVGVIGDKAQAIYSFQGARVSLFEKFKVDLINSHTILENHRSSY
QIVTFLNSIREDITQTVYSGIENDKVTILIGNRIRSYTKVVNICNKESLVTLSRDNITSNAMRIKLEGNNFDKKLLEKFQ
EIDSNSKRRNTIISLIKAIELAKNTKYKDALKIVESIYKDENNPKKIALNSLINMINKYDKYGNGTLMNFYNTLCKTLDI
KLSGFRKGQVKDFYENTLYKNMVICTNIVEDTSNHITIHKAKGAEFENVFVIGNKDTLSLLLKPDLMNDEEHRIFYVAMS
RAKKKLFLQFDYLDNNEQKKIKERYDVSIIQ