REI Gene Information


Name : topB (SAPIG0055)
Accession : YP_005732865.1
REI name : Type-V SCCmec
REI accession : NC_017333_R1
Strain : Staphylococcus aureus 04-02981
Resistance or Virulence: Not determined
Product : DNA topoisomerase III
Function : -
Note : -
Homologs in the searched genomes :   2 hits    ( 2 protein-level )  
Publication :
    -Schijffelen,M.J., "Direct Submission", Submitted (23-APR-2008) Schijffelen M.J., Medical Microbiologie, UMC Utrecht, Heidelberglaan 100, Utrecht, 3584 CX, NETHERLANDS.

    -Schijffelen,M.J., Boel,C.H., van Strijp,J.A. and Fluit,A.C., "Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditis", BMC Genomics 11, 376 (2010) PUBMED 20546576 REMARK Publication Status: Online-Only.

    -Schijffelen,M.J., Boel,C.H., van Strijp,J.A. and Fluit,A.C., "Direct Submission", Submitted (19-OCT-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
GTGTCTTACGATAAGAGAGAGCAGTTCAACTTTATTAAACAGCTATTCAATGACTCTAGCATTAGAACAATTGTAAACGG
GTGTGATTCGGACCGCGAGGGGTCCAATATTTTTTATTCATCCTACTACATGACTGGAGCAAAAAATAAGGAAATTAAAC
GATTATGGATTAATTCACTAGAGGTTGATGAAATAAGGAAAGGATTCAATAATCTTCAAGATAACAAAAAAGACTTATTA
CTTTATTACGAAGCAAAGACACGTCAAATAAGTGATTGGCTTGTTGGAATGAACGGAAGCCGGTTATTTACCCTCCTCTT
ACAACAAAAGGGGTTTAATGACAGTCTCTCGATTGGACGGGTACAGTCTTCCACAGTATACCTTATTTATCAACGTCAAA
AAGAAATAGAACAATTTGTTTCTACACCTTTCTATGAAATTGAAGGAAGCTTTACCGCCAAAAATGGCATGTATAAAGGA
AAAGCAAAAATTAAAAGTGAAACTCTAAAATTGCAGCTGATGCTCTAA

Protein sequence :
MSYDKREQFNFIKQLFNDSSIRTIVNGCDSDREGSNIFYSSYYMTGAKNKEIKRLWINSLEVDEIRKGFNNLQDNKKDLL
LYYEAKTRQISDWLVGMNGSRLFTLLLQQKGFNDSLSIGRVQSSTVYLIYQRQKEIEQFVSTPFYEIEGSFTAKNGMYKG
KAKIKSETLKLQLML