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Homologs of orf1 gene of AY144117

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PAU_00276
( YP_003039115.1 )

hypothetical protein

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

9e-118

2) XNC1_4540
( YP_003714624.1 )

hypothetical protein

NC_014228
(Xenorhabdus nematophila ATCC 19061)

7e-105

3) XBJ1_0275
( YP_003466224.1 )

hypothetical protein

NC_013892
(Xenorhabdus bovienii SS-2004)

1e-104

4) SG1032
( YP_002226091.1 )

hypothetical protein

NC_011274
(Salmonella enterica 287/91)

1e-63

5) SPUCDC_1901
( YP_008481531.1 )

hypothetical protein

NC_022221
(Salmonella enterica CDC1983-67)

1e-63

6) SPUL_1915
( YP_005213074.1 )

hypothetical protein

NC_016831
(Salmonella enterica RKS5078)

1e-63

7) Z0251
( NP_285912.1 )

hypothetical protein

NC_002655
(Escherichia coli EDL933)

2e-63

8) ECs0220
( NP_308247.1 )

hypothetical protein

NC_002695
(Escherichia coli Sakai)

2e-63

• Sequence Alignments

1) PAU_00276 in NC_012962


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  416 bits (1567),  Expect = 9e-118, Method: Compositional matrix adjust.
 Identities = 275/334 (83%), Positives = 310/334 (93%), Gaps = 2/334 (0%)

Query  105  EEAQGALAHLAQCWHTDEPALAKEIDQLRSRYARKPTPKPVAAPAEPTENTAQPTISPAL  164
            EEAQGALAHLAQCWHTDEPALAKEIDQLR+RYARKP PKP AAPA +TE TAQ++ +PAL
Sbjct  1    EEAQGALAHLAQCWHTDEPALAKEIDQLRPRYARKPEPKPAAAPAKSTETTAQSANTPAL  60

Query  165  T--PAPDIAVDSTSEKAWKQTLLTVADLLCERQPDSPTGYRLRRYATWHTLTTAPIANGE  222
            T  P PD++VDS++EKAWKQTLLTVADLLCERQPDSP GYRLRRYA WHTLTTAP+ANG 
Sbjct  61   TSPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAPMANGA  120

Query  223  GKTPLAPISADRTADYlaklpaadkpllQQIEQSLTLAPYWLDGHAIAAQAAEKLGYTAV  282
            GKTPLAP +ADRTADYL+KLPAADK+LLQQIEQSLTLAPYWLDGHAIAAQAAEKLGY +V
Sbjct  121  GKTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKLGYRPV  180

Query  283  ASAIRDELKAFLDRLPILQTLYFSDMSPFISAATLNWLHPPATAAGNGGSTQDQEAIWQC  342
            A AIRDEL+AFLDRLP+LQ L FSDMSPFIS ATLNWLHPPATAA + G+TQ+Q+AIWQC
Sbjct  181  ADAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPATAAVSRGATQEQDAIWQC  240

Query  343  FQQHGLEAALNAAEQHQQQLTEPRDQFYGQLLTAQLLEKAGMTALAQQHYRHLLQAGQHM  402
            FQQHGLEAALNAAE+ QQ+LTEPRDQFYGQLLTAQLLE+AGM+ALAQQHYR+LL+AG+H+
Sbjct  241  FQQHGLEAALNAAEHYQQHLTEPRDQFYGQLLTAQLLEQAGMSALAQQHYRQLLRAGRHL  300

Query  403  LLTHWEPGLLAGLAEKASINCTSKDTAANRSVNP  436
             L++WEPGLLA+LAEKA++   SK+T+ANRSVNP
Sbjct  301  SLADWEPGLLAALAEKAPMTAPSKETTANRSVNP  334

2) XNC1_4540 in NC_014228


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  374 bits (1404),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 222/339 (66%), Positives = 287/339 (85%), Gaps = 7/339 (2%)

Query  144  DDAQGALAHLAQCWHVNEPELAKEVDQLRTRYSRQpetvpeapkpapvaaptsttessvs  203
            ++AQGALAHLAQCWH +EP LAKE+DQLR RY+R+PE  P A+ + +  + + ++++   
Sbjct  1    EEAQGALAHLAQCWHTDEPALAKEIDQLRPRYARKPEPKPAAAPAKSTETTAQSANT---  57

Query  204  tpQSYEAAPMPEVDVNSSSEKAWKQTLLTVSDLLCERHPESPVGYSLRRHAVWHTLTTAP  263
               +  ++P+P+V V+SS+EKAWKQTLLTV+DLLCER+P+SPVGY LRR A+WHTLTTAP
Sbjct  58   --PALTSPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAP  115

Query  264  MANATGKTPLAPASADRTADYLARLPTANNKLLQQIEQSLTLAPYWLDGHAIAAQTALQL  323
            MAN++GKTPLAP++ADRTADYL++LP+A++ LLQQIEQSLTLAPYWLDGHAIAAQ+A +L
Sbjct  116  MANGAGKTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKL  175

Query  324  GYVNVALAIRDELNAFLDRLPVLKTLSFSDMSPFISPETLDWLAPEPVATGKGAVSADQE  383
            GY  VA AIRDEL AFLDRLPVL+ LSFSDMSPFIS  TL+WL P + A+   + + +Q+
Sbjct  176  GYRPVADAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPATAAVSRGATQEQD  235

Query  384  AIWQCFAQQGLEAALKMLEEHQQQLTEPRDQFYGQLLNAHLLEEAGMTSLAQQHYRNLLH  443
            AIWQCF Q+GLEAAL+  E+ QQ+LTEPRDQFYGQLL A+LLE+AGM++LAQQHYR+LL+
Sbjct  236  AIWQCFQQHGLEAALNAAEHYQQHLTEPRDQFYGQLLTAQLLEQAGMSALAQQHYRQLLR  295

Query  444  TGQHMLLTQWEPSLLALLADKLP--SPSSEPASNRSVNP  480
            +G+H+ L++WEP+LLA LA+K P  +PS E ++NRSVNP
Sbjct  296  AGRHLSLADWEPGLLAALAEKAPMTAPSKETTANRSVNP  334

3) XBJ1_0275 in NC_013892


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  372 bits (1400),  Expect = 1e-104, Method: Compositional matrix adjust.
 Identities = 219/336 (66%), Positives = 292/336 (87%), Gaps = 5/336 (1%)

Query  144  DEAQGALAHLAQCWHASEPDLAKDVDQLRTRYNRqpeartaptqtapttpeaaSVAPSPQ  203
            +EAQGALAHLAQCWH+ EP LAK++DQLR RY R+PE++ A++ + +T   A S   ++ 
Sbjct  1    EEAQGALAHLAQCWHTDEPALAKEIDQLRPRYARKPEPKPAAAPAKSTETTAQSANTPAL  60

Query  204  SPEQAPMPEVAVNSSSDKAWKQTLMTVADLLCERYPESPIGYSLRRHAVWHTITTAPMAN  263
            ++  +P+P+V+V+SS++KAWKQTL+TVADLLCER P+SP+GY LRR A+WHT+TTAPMAN
Sbjct  61   TS--PPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAPMAN  118

Query  264  ATGKTPLAPASADRTADYLARLPTADNKLLAQIEQSLALAPYWLDGHAIAAQAAEQRGYS  323
            ++GKTPLAP++ADRTADYL++LP+AD+ LL QIEQSL+LAPYWLDGHAIAAQAAE+ GY 
Sbjct  119  GAGKTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKLGYR  178

Query  324  RVAQAMRDELKAFLARLPVLKTLSFSDLSPFISPDTLDWLTPEPDTSGSPGAASADQEAI  383
             VA+A+RDEL+AFL RLPVL+ LSFSD+SPFIS  TL+WL P P T++ + +A+ +Q+AI
Sbjct  179  PVADAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHP-PATAAVSRGATQEQDAI  237

Query  384  WHCFQQQGLEAALQMLEEHQQSLTEPRDQFYGQLFTAQLLEEAGMTALAHQHYRNLLHTG  443
            W+CFQQ+GLEAAL+  E+ QQ LTEPRDQFYGQL+TAQLLE+AGM+ALA+QHYR+LL++G
Sbjct  238  WQCFQQHGLEAALNAAEHYQQHLTEPRDQFYGQLLTAQLLEQAGMSALAQQHYRQLLRAG  297

Query  444  QHMLLTEWEPSLLTLLAEKIP--SPAKDTASHRSVN  477
            +H+ L++WEP+LL+ LAEK P  +P+K+T+++RSVN
Sbjct  298  RHLSLADWEPGLLAALAEKAPMTAPSKETTANRSVN  333

4) SG1032 in NC_011274


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 238/326 (74%), Gaps = 19/326 (5%)

Query  106  AELAKLAQRWQEQNIPALAQAVDDLSSQYRRAFRgaapvppaagpstppapvsatpsapv  165
            + LA LAQ W+ ++ PALA+ +D+L ++Y R         P + P+++PA  + T + + 
Sbjct  5    GALAHLAQCWHTDE-PALAKEIDQLRPRYARK--------PEPKPAAAPAKSTETTAQSA  55

Query  166  spsapaattappvDIDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQAITSVP  225
            + +A ++   P V +DS ++KAW++TLL VA +LCERQPDSP GYRLRR A+W+++T+ P
Sbjct  56   NTPALTSPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAP  115

Query  226  QAESDGRTPLAAVPADMTADYQARLNNADLALWQQVEKSLLLAPYWLDGHYLSAQAAQRL  285
             A++ G+TPLA+ +AD TADY ++L  AD +L QQ+E+SL LAPYWLDGH ++AQAA++L
Sbjct  116  MANGAGKTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKL  175

Query  286  GYTSAAEAIRDEVVRFLARLPQLATLLFNDRTPFISEQTKQWLAASPGSQTAPMVR-TSE  344
            GY + A+AIRDE+  FL RLP L  L F+D +PFIS+ T +WL +++   TA++ R +++
Sbjct  176  GYRPVADAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPA---TAAVSRGATQ  232

Query  345  DTEAVRQCFSEQGLEATL----RYLETLPEGDPRDRFHRQYLGAQLLEEAGMAQLAQQQY  400
            + +A++QCF ++GLEA+L    +Y + L   +PRD+F  Q L AQLLE+AGM+ LAQQ+Y
Sbjct  233  EQDAIWQCFQQHGLEAALNAAEHYQQHL--TEPRDQFYGQLLTAQLLEQAGMSALAQQHY  290

Query  401  RMLFKAGLRMTLAEWEPSLLEQLENK  426
            R L++AG +++LA+WEP+LL  L +K
Sbjct  291  RQLLRAGRHLSLADWEPGLLAALAEK  316

5) SPUCDC_1901 in NC_022221


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 238/326 (74%), Gaps = 19/326 (5%)

Query  106  AELAKLAQRWQEQNIPALAQAVDDLSSQYRRAFRgaapvppaagpstppapvsatpsapv  165
            + LA LAQ W+ ++ PALA+ +D+L ++Y R         P + P+++PA  + T + + 
Sbjct  5    GALAHLAQCWHTDE-PALAKEIDQLRPRYARK--------PEPKPAAAPAKSTETTAQSA  55

Query  166  spsapaattappvDIDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQAITSVP  225
            + +A ++   P V +DS ++KAW++TLL VA +LCERQPDSP GYRLRR A+W+++T+ P
Sbjct  56   NTPALTSPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAP  115

Query  226  QAESDGRTPLAAVPADMTADYQARLNNADLALWQQVEKSLLLAPYWLDGHYLSAQAAQRL  285
             A++ G+TPLA+ +AD TADY ++L  AD +L QQ+E+SL LAPYWLDGH ++AQAA++L
Sbjct  116  MANGAGKTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKL  175

Query  286  GYTSAAEAIRDEVVRFLARLPQLATLLFNDRTPFISEQTKQWLAASPGSQTAPMVR-TSE  344
            GY + A+AIRDE+  FL RLP L  L F+D +PFIS+ T +WL +++   TA++ R +++
Sbjct  176  GYRPVADAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPA---TAAVSRGATQ  232

Query  345  DTEAVRQCFSEQGLEATL----RYLETLPEGDPRDRFHRQYLGAQLLEEAGMAQLAQQQY  400
            + +A++QCF ++GLEA+L    +Y + L   +PRD+F  Q L AQLLE+AGM+ LAQQ+Y
Sbjct  233  EQDAIWQCFQQHGLEAALNAAEHYQQHL--TEPRDQFYGQLLTAQLLEQAGMSALAQQHY  290

Query  401  RMLFKAGLRMTLAEWEPSLLEQLENK  426
            R L++AG +++LA+WEP+LL  L +K
Sbjct  291  RQLLRAGRHLSLADWEPGLLAALAEK  316

6) SPUL_1915 in NC_016831


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  237 bits (883),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 156/326 (48%), Positives = 238/326 (74%), Gaps = 19/326 (5%)

Query  106  AELAKLAQRWQEQNIPALAQAVDDLSSQYRRAFRgaapvppaagpstppapvsatpsapv  165
            + LA LAQ W+ ++ PALA+ +D+L ++Y R         P + P+++PA  + T + + 
Sbjct  5    GALAHLAQCWHTDE-PALAKEIDQLRPRYARK--------PEPKPAAAPAKSTETTAQSA  55

Query  166  spsapaattappvDIDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQAITSVP  225
            + +A ++   P V +DS ++KAW++TLL VA +LCERQPDSP GYRLRR A+W+++T+ P
Sbjct  56   NTPALTSPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAP  115

Query  226  QAESDGRTPLAAVPADMTADYQARLNNADLALWQQVEKSLLLAPYWLDGHYLSAQAAQRL  285
             A++ G+TPLA+ +AD TADY ++L  AD +L QQ+E+SL LAPYWLDGH ++AQAA++L
Sbjct  116  MANGAGKTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKL  175

Query  286  GYTSAAEAIRDEVVRFLARLPQLATLLFNDRTPFISEQTKQWLAASPGSQTAPMVR-TSE  344
            GY + A+AIRDE+  FL RLP L  L F+D +PFIS+ T +WL +++   TA++ R +++
Sbjct  176  GYRPVADAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPA---TAAVSRGATQ  232

Query  345  DTEAVRQCFSEQGLEATL----RYLETLPEGDPRDRFHRQYLGAQLLEEAGMAQLAQQQY  400
            + +A++QCF ++GLEA+L    +Y + L   +PRD+F  Q L AQLLE+AGM+ LAQQ+Y
Sbjct  233  EQDAIWQCFQQHGLEAALNAAEHYQQHL--TEPRDQFYGQLLTAQLLEQAGMSALAQQHY  290

Query  401  RMLFKAGLRMTLAEWEPSLLEQLENK  426
            R L++AG +++LA+WEP+LL  L +K
Sbjct  291  RQLLRAGRHLSLADWEPGLLAALAEK  316

7) Z0251 in NC_002655


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 132/259 (51%), Positives = 197/259 (77%), Gaps = 8/259 (3%)

Query  5    SAPAPQIAIDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQSITSTPQAESDG  64
            S+P P++++DS ++KAW++TLL VA +LCERQPDSP GYRLRR A+W+++T++P A++ G
Sbjct  62   SPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAPMANGAG  121

Query  65   RTPLAAVSADMVADYQSRLASADMALWQQVEKSVLLAPYWLDGHCLSAQTALRLGYKQVA  124
            +TPLA+ +AD  ADY ++L++AD +L QQ+E+S+ LAPYWLDGH ++AQ+A +LGY+ VA
Sbjct  122  KTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKLGYRPVA  181

Query  125  DTIRDEVIRFLERLPQLTGLLFNDRTPFLSEQTKQWLAASPDGKVAPVAQIGEESQAARA  184
            D+IRDE+  FL+RLP L  L F+D +PF+S+ T +WL +++ + V+  A   +E +A + 
Sbjct  182  DAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPATAAVSRGA--TQEQDAIWQ  239

Query  185  CFAGQGLEAAL----RYLDMLPEGDPRDQFHRQYLAAQLTEEAGLIQLAQQQYRMLLMIG  240
            CF  +GLEAAL    +Y + L   +PRDQF  Q L+AQL E+AG+  LAQQ+YR LL  G
Sbjct  240  CFQQHGLEAALNAAEHYQQHL--TEPRDQFYGQLLTAQLLEQAGMSALAQQHYRQLLRAG  297

Query  241  SQMMVSDWEPSLLTQLEQK  259
             ++ ++DWEP+LL+ L +K
Sbjct  298  RHLSLADWEPGLLAALAEK  316

8) ECs0220 in NC_002695


> AY144117|1|G1|27497163|AAN64193.1|Photorhabdus_luminescens_W14|+|1..1006|orf1|-|Orf1
Length=334

 Score =  235 bits (875),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 132/259 (51%), Positives = 197/259 (77%), Gaps = 8/259 (3%)

Query  5    SAPAPQIAIDSHDDKAWRDTLLKVAAILCERQPDSPQGYRLRRHALWQSITSTPQAESDG  64
            S+P P++++DS ++KAW++TLL VA +LCERQPDSP GYRLRR A+W+++T++P A++ G
Sbjct  62   SPPIPDVTVDSSGEKAWKQTLLTVADLLCERQPDSPVGYRLRRYAIWHTLTTAPMANGAG  121

Query  65   RTPLAAVSADMVADYQSRLASADMALWQQVEKSVLLAPYWLDGHCLSAQTALRLGYKQVA  124
            +TPLA+ +AD  ADY ++L++AD +L QQ+E+S+ LAPYWLDGH ++AQ+A +LGY+ VA
Sbjct  122  KTPLAPTAADRTADYLTKLPAADKSLLQQIEQSLTLAPYWLDGHAIAAQAAEKLGYRPVA  181

Query  125  DTIRDEVIRFLERLPQLTGLLFNDRTPFLSEQTKQWLAASPDGKVAPVAQIGEESQAARA  184
            D+IRDE+  FL+RLP L  L F+D +PF+S+ T +WL +++ + V+  A   +E +A + 
Sbjct  182  DAIRDELRAFLDRLPVLQNLSFSDMSPFISDATLNWLHPPATAAVSRGA--TQEQDAIWQ  239

Query  185  CFAGQGLEAAL----RYLDMLPEGDPRDQFHRQYLAAQLTEEAGLIQLAQQQYRMLLMIG  240
            CF  +GLEAAL    +Y + L   +PRDQF  Q L+AQL E+AG+  LAQQ+YR LL  G
Sbjct  240  CFQQHGLEAALNAAEHYQQHL--TEPRDQFYGQLLTAQLLEQAGMSALAQQHYRQLLRAG  297

Query  241  SQMMVSDWEPSLLTQLEQK  259
             ++ ++DWEP+LL+ L +K
Sbjct  298  RHLSLADWEPGLLAALAEK  316