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Homologs of ORF C94 gene of AF440523

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Rmet_2306
( YP_584454.1 )

hypothetical protein

NC_007973
(Cupriavidus metallidurans CH34)

3e-49

100

2) PLES_26961
( YP_002440288.1 )

hypothetical protein

NC_011770
(Pseudomonas aeruginosa LESB58)

3e-49

100

3) Bpet1457
( YP_001630062.1 )

hypothetical protein

NC_010170
(Bordetella petrii DSM 12804)

1e-30

4) XCV2403
( YP_364134.1 )

hypothetical protein

NC_007508
(Xanthomonas campestris 85-10)

2e-30

5) XF1772
( NP_299061.1 )

hypothetical protein

NC_002488
(Xylella fastidiosa 9a5c)

2e-29

6) Alide2_1890
( YP_004387784.1 )

hypothetical protein

NC_015422
(Alicycliphilus denitrificans K601)

3e-11

• Sequence Alignments

1) Rmet_2306 in NC_007973


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score =  187 bits (694),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MSLIrqhhassqsfqaaadsfraTRQSAIASSLRTRVTRDADAFFSTACGSCHPVRDEAP  60
            MSLIRQHHASSQSFQAAADSFRATRQSAIASSLRTRVTRDADAFFSTACGSCHPVRDEAP
Sbjct  1    MSLIRQHHASSQSFQAAADSFRATRQSAIASSLRTRVTRDADAFFSTACGSCHPVRDEAP  60

Query  61   LFPRSPSMSQQASFGQLALIHCGKFLPLEILHSAAGHYIGTRDTEGPVSRESCQYFRSYA  120
            LFPRSPSMSQQASFGQLALIHCGKFLPLEILHSAAGHYIGTRDTEGPVSRESCQYFRSYA
Sbjct  61   LFPRSPSMSQQASFGQLALIHCGKFLPLEILHSAAGHYIGTRDTEGPVSRESCQYFRSYA  120

Query  121  AAQRALERGGWSQLATP  137
            AAQRALERGGWSQLATP
Sbjct  121  AAQRALERGGWSQLATP  137

2) PLES_26961 in NC_011770


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score =  187 bits (694),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%)

Query  1    MSLIrqhhassqsfqaaadsfraTRQSAIASSLRTRVTRDADAFFSTACGSCHPVRDEAP  60
            MSLIRQHHASSQSFQAAADSFRATRQSAIASSLRTRVTRDADAFFSTACGSCHPVRDEAP
Sbjct  1    MSLIRQHHASSQSFQAAADSFRATRQSAIASSLRTRVTRDADAFFSTACGSCHPVRDEAP  60

Query  61   LFPRSPSMSQQASFGQLALIHCGKFLPLEILHSAAGHYIGTRDTEGPVSRESCQYFRSYA  120
            LFPRSPSMSQQASFGQLALIHCGKFLPLEILHSAAGHYIGTRDTEGPVSRESCQYFRSYA
Sbjct  61   LFPRSPSMSQQASFGQLALIHCGKFLPLEILHSAAGHYIGTRDTEGPVSRESCQYFRSYA  120

Query  121  AAQRALERGGWSQLATP  137
            AAQRALERGGWSQLATP
Sbjct  121  AAQRALERGGWSQLATP  137

3) Bpet1457 in NC_010170


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score =  125 bits (459),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 82/110 (75%), Positives = 90/110 (82%), Gaps = 3/110 (2%)

Query  21   IASSLRTRVPVTSMLFINRVRE--LPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLP  78
            IASSLRTRV   +  F++       P R+  +P FPRSPSMSQQASFGQLAL  CGKFLP
Sbjct  29   IASSLRTRVTRDADAFFSTACGSCHPVRDE-APLFPRSPSMSQQASFGQLALIHCGKFLP  87

Query  79   LEVLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP  128
            LE+L+SAAGHYIGTRDTEGPVSRES +YFRSYAAAQRALERGGWSQLA P
Sbjct  88   LEILHSAAGHYIGTRDTEGPVSRESCQYFRSYAAAQRALERGGWSQLATP  137

4) Bxe_A1220 in NC_007951


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score =  125 bits (459),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 82/110 (75%), Positives = 90/110 (82%), Gaps = 3/110 (2%)

Query  21   IASSLRTRVPVTSMLFINRVRE--LPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLP  78
            IASSLRTRV   +  F++       P R+  +P FPRSPSMSQQASFGQLAL  CGKFLP
Sbjct  29   IASSLRTRVTRDADAFFSTACGSCHPVRDE-APLFPRSPSMSQQASFGQLALIHCGKFLP  87

Query  79   LEVLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP  128
            LE+L+SAAGHYIGTRDTEGPVSRES +YFRSYAAAQRALERGGWSQLA P
Sbjct  88   LEILHSAAGHYIGTRDTEGPVSRESCQYFRSYAAAQRALERGGWSQLATP  137

5) XCV2403 in NC_007508


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 81/110 (74%), Positives = 90/110 (82%), Gaps = 3/110 (2%)

Query  21   IASGLRTRVPVTSMLFINRVRE--LPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLP  78
            IAS+LRTRV   +  F++       P R+  +P FPRSPSMSQQASFGQLAL  CGKFLP
Sbjct  29   IASSLRTRVTRDADAFFSTACGSCHPVRDE-APLFPRSPSMSQQASFGQLALIHCGKFLP  87

Query  79   LEVLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP  128
            LE+L+SAAGHYIGTRDTEGPVSRES +YFRSYAAAQRALERGGWSQLA P
Sbjct  88   LEILHSAAGHYIGTRDTEGPVSRESCQYFRSYAAAQRALERGGWSQLATP  137

6) XF1772 in NC_002488


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 80/110 (73%), Positives = 88/110 (80%), Gaps = 3/110 (2%)

Query  29   IASIPRTRVPVTSMLFINRVRE--LPSREGRGPAFPRSPSMSQQASFGQLALTYCGKFLP  86
            IAS  RTRV   +  F++       P R+  +P FPRSPSMSQQASFGQLAL  CGKFLP
Sbjct  29   IASSLRTRVTRDADAFFSTACGSCHPVRDE-APLFPRSPSMSQQASFGQLALIHCGKFLP  87

Query  87   LEVLQSAAGHYIGTRDTEGPVSRESREYFRSYAAAQRALERGGWSQLAIP  136
            LE+L+SAAGHYIGTRDTEGPVSRES +YFRSYAAAQRALERGGWSQLA P
Sbjct  88   LEILHSAAGHYIGTRDTEGPVSRESCQYFRSYAAAQRALERGGWSQLATP  137

7) Alide2_1890 in NC_015422


> AF440523|103|G94|24461616|AAN62187.1|Pseudomonas_aeruginosa_C|-|113035..113448|ORF 
C94|-|conserved hypothetical protein
Length=137

 Score = 61.3 bits (213),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 48/102 (48%), Positives = 67/102 (66%), Gaps = 8/102 (7%)

Query  3    NPSGVFRSRQGVVLPVFNHQEMPMSLAFASAPLSAEQARAESIGYQALAYVGKRLPLQVL  62
            ++ + F +  G   PV  ++E P+   F+ +P  ++QA   S+G  AL   GK LPL++L
Sbjct  40   DADAFFSTACGSCHPV--RDEAPL---FPRSPSMSQQA---SFGQLALIHCGKFLPLEIL  91

Query  63   CSAAGHYIGTADADGPVSRESVSYFRSHHAAEHALQTGRWQQ  104
             SAAGHYIGT D++GPVSRES  YFRS  AA++AL+ G W Q
Sbjct  92   HSAAGHYIGTRDTEGPVSRESCQYFRSYAAAQRALERGGWSQ  133