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Homologs of xerC gene of AJ870974

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) Psyr_1421
( YP_234510.1 )

Phage integrase

NC_007005
(Pseudomonas syringae B728a)

3e-137

2) PSPPH_0747
( YP_273035.1 )

hypothetical protein

NC_005773
(Pseudomonas syringae 1448A)

1e-102

3) PSPPH_3760
( YP_275902.1 )

hypothetical protein

NC_005773
(Pseudomonas syringae 1448A)

5e-99

4) M062_04805
( YP_008131410.1 )

tyrosine recombinase XerC

NC_021577
(Pseudomonas aeruginosa RP73)

4e-95

5) PSPA7_4434
( YP_001349785.1 )

phage integrase family site specific recombinase

NC_009656
(Pseudomonas aeruginosa PA7)

7e-95

6) AvCA_36590
( YP_007894588.1 )

phage integrase

NC_021149
(Azotobacter vinelandii CA)

8e-95

7) AvCA6_36590
( YP_007899637.1 )

phage integrase

NC_021150
(Azotobacter vinelandii CA6)

8e-95

8) Avin_36590
( YP_002800781.1 )

phage integrase

NC_012560
(Azotobacter vinelandii DJ)

8e-95

9) PA14_51650
( YP_792297.1 )

integrase

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

9e-94

10) PADK2_24130
( YP_006484791.1 )

integrase

NC_018080
(Pseudomonas aeruginosa DK2)

2e-93

11) NCGM2_1785
( YP_005980030.1 )

putative integrase

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

1e-92

12) G655_20460
( YP_007710931.1 )

phage integrase family site specific recombinase

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-92

13) G655_23935
( YP_007711623.1 )

phage integrase family site specific recombinase

NC_020912
(Pseudomonas aeruginosa B136-33)

2e-92

14) PSPA7_4530
( YP_001349880.1 )

phage integrase family site specific recombinase

NC_009656
(Pseudomonas aeruginosa PA7)

6e-86

• Sequence Alignments

1) Psyr_1421 in NC_007005


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  481 bits (1814),  Expect = 3e-137, Method: Compositional matrix adjust.
 Identities = 273/435 (63%), Positives = 344/435 (80%), Gaps = 4/435 (0%)

Query  1    MKPMTLPELTQEYILTHDLRPDTVKIYWAATKSYVRFFGDCLACETTHRDMLDWRRSELE  60
            MKPMTLPELTQEYILTHDLRPDTVKIY AATK+YV FFG+CLACETTHRDML+WRRSEL 
Sbjct  1    MKPMTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLACETTHRDMLEWRRSELA  60

Query  61   RISKRSWNTYSSHLRTIYGYAIEHGLLELVVNPLKNTRVMPPKRPKKTVANDASVRARNW  120
            RISKRSWNTYSSHLRT+Y YA+EHGL+EL VNPLK+TRVMP KRPKKT++ND  VRARNW
Sbjct  61   RISKRSWNTYSSHLRTVYRYAMEHGLVELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LRMLTAEERATAKRTEITPAWFWLSVFETFYYTGIRLNALLCLRYADVYLRDRLIRVRGE  180
            LR L  EE +T+KR+EITPAWFWL+VFETFYYTGIRLNALLCLRY +V L +RLIRVRGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHREFLIPIPDGLMAQLETLMQAAKALRFQPGDQLFNVNRFSGHYRRHEMNSNQVEA  240
            TEKTHREF+IPIPDGLM++L  +M++AK + F   DQ+FN+NRFSGHY+R+ MNS+QVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYKKLTAMTGIRMTPHRFRHTIASELMTLPERNIYLTKKLLNHSNIATTMDYIEPDYDMM  300
            MYKKLT MTG RMTPHRFRHTIASELM  PERNI +TK+LLNHSNIATTM+YIEPDYD+M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  REVMNERGKRPAKISYMAKPDATLRADRHRSISAPVKDLTASTKTRGTTAE-AESSAGQA  359
            REVMNERG++ AKI+Y+ +P     ++   + + P   L ++T  + +T+E +E+  ++ 
Sbjct  301  REVMNERGQQQAKINYLVRPIIPKSSGPAAGSAVPRVSLVSGTELQPATTESSEAKKADD  360

Query  360  LARPRALPTPVSTMCPSTAPDT-RTVNRDETPSPTSDRDTAVSQLPLGCSSPED--LLRS  416
             A   +++  +  M  +   +  ++      + P++  ++    L+L   +PE    +  
Sbjct  361  TASNPPIAERLELMSTAPLVNVLKSTPVSVHSEPATSNEAKAQALSLISDAPEMEYEFGE  420

Query  417  LGELTRWVQNNIAGG  431
            L +++RW+++N AG 
Sbjct  421  LEDIARWIRENAAGE  435

2) PSPPH_0747 in NC_005773


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  366 bits (1376),  Expect = 1e-102, Method: Compositional matrix adjust.
 Identities = 219/407 (54%), Positives = 299/407 (74%), Gaps = 24/407 (5%)

Query  1    MEHGLVELKVNPLKETRVIPTKRPKKTINTDAIVRARNWLNILVQEERATAKRAEITPAW  60
            MEHGLVELKVNPLK+TRV+PTKRPKKTI  D IVRARNWL +LVQEE +T+KR+EITPAW
Sbjct  82   MEHGLVELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNWLRFLVQEELSTGKRSEITPAW  141

Query  61   FWLAVFEMFYYTGIRLNALICLRYADIDMGERLIKVRGETEKTHREFMIPIPDRLMPHLK  120
            FWLAVFE FYYTGIRLNAL+CLRY ++D+G+RLI+VRGETEKTHREFMIPIPD LMPHL 
Sbjct  142  FWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGETEKTHREFMIPIPDGLMPHLV  201

Query  121  QLMDIAHRVGFSPTDQIFNVNRFSGHYSRSQMNSDQVEAMYKKLTAMTGVRMTPHRFRHT  180
             +MD A +VGFS TDQ+FN+NRFSGHY R  MNSDQVEAMYKKLT MTG RMTPHRFRHT
Sbjct  202  LVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEAMYKKLTNMTGTRMTPHRFRHT  261

Query  181  IASEMMRQPERNIHITKSLLNHSNITTTMEYIEPDYDVMREVMNERGKRSAKINYMPHSD  240
            IASE+MRQPERNIHITK+LLNHSNI+TTMEYIEPDYD+MREVMNERG++ AKINY+ ++ 
Sbjct  262  IASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLMREVMNERGQQQAKINYLVRPI  321

Query  241  AANRKNERKGKKAPVKNLVQSSVTSSHSPDTGMTFQSTQAPA-PEENAHSQLNADS----  295
             ++      G   P  +LV ++   + + +++ + ++ ++++ P    + +L + +    
Sbjct  322  IPKSSGPAAGSAVPRVSLVSGTELQPATTESSEAKKADDTASNPPIAERLELMSTAPLVN  381

Query  296  VYRTNAEVEKTESNRTEASRADPLPIDQTDLFGDPSDPRMGRAIPHGDMIPEYLARRLVE  355
            V ++ +    +E+  ++ ++A++L+     L++D+++              EY    L +
Sbjct  382  VLKSTPVSVHSEPATSNEAKAQALS-----LISDAPE-------------MEYEFGELED  423

Query  356  FSLWLREAASGRLVMGPTTGSDAIPSGPNEQIAKLTPACIQTNTWNS  402
            ++ W+RE A+G +V+   ++ + I + ++ + +  +P       W+S
Sbjct  424  IARWIRENAAGEMVV-QIAAEEDIGTISEGKASIQSPDGYYRIPWSS  469

3) PSPPH_3760 in NC_005773


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  354 bits (1331),  Expect = 5e-99, Method: Compositional matrix adjust.
 Identities = 223/375 (60%), Positives = 283/375 (76%), Gaps = 19/375 (5%)

Query  96   YAMEHGLVELKVNPLKETRViptkrpkktiktDAIVRARNWLNILVQEERATEKRAEITP  155
            YAMEHGLVELKVNPLK+TRV+PTKRPKKTI  D IVRARNWL +LVQEE +T KR+EITP
Sbjct  80   YAMEHGLVELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNWLRFLVQEELSTGKRSEITP  139

Query  156  AWFWLAVFEMFYYTGIRLNALICLRYADIDIGERLIRVRGETEKTHREFMIPIPDGLMPH  215
            AWFWLAVFE FYYTGIRLNAL+CLRY ++D+G+RLIRVRGETEKTHREFMIPIPDGLMPH
Sbjct  140  AWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGETEKTHREFMIPIPDGLMPH  199

Query  216  LKLLMEIAHKVGFAPTDQIFNVNRFSGHYSRSQMNSDQVEAMYKKLTAMTGVRMTPHRFR  275
            L L+M+ A KVGF+ TDQ+FN+NRFSGHY R  MNSDQVEAMYKKLT MTG RMTPHRFR
Sbjct  200  LVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEAMYKKLTNMTGTRMTPHRFR  259

Query  276  HTIASEMMRQPERNIHITKSLLNHSNIATTMEYIEPDYDVMREVMNERGKRPAKINYLAK  335
            HTIASE+MRQPERNIHITK+LLNHSNIATTMEYIEPDYD+MREVMNERG++ AKINYL +
Sbjct  260  HTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLMREVMNERGQQQAKINYLVR  319

Query  336  SDAANQENARTSKKAPVKNLTQNS---PRITPTPHLDSASGSTRVPATAANVHPQMKTDE  392
            +  ++   + ++   P  +L   +   P  T +++   A +++  P+ A  ++  M T  
Sbjct  320  PIIPKSSGPAAGSAVPRVSLVSGTELQPATTESSEAKKADDTASNPPIAERLE-LMSTAP  378

Query  393  MHRRGERAKNAHSNRTETYRADPVPIDQTDLFGDLADPLMGRALAPGDMSAEYLARRLDE  452
            +        N   +   + +++P   +++      A++L   +L ++    EY    L++
Sbjct  379  LV-------NVLKSTPVSVHSEPATSNEAK-----AQAL---SLISDAPEMEYEFGELED  423

Query  453  FSLWLREAASGRLVM  467
            ++ W+RE A+G +V+
Sbjct  424  IARWIRENAAGEMVV  438

4) M062_04805 in NC_021577


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  341 bits (1279),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 194/371 (53%), Positives = 268/371 (73%), Gaps = 10/371 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  +  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARSW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RAR+W
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LSMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            L   V  E  TG R+ ITPAWFWL  FE FYYTGIRLNALLC+R  ++D +++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEAEKAGFADDDQLFNVNRFSPHYKSKTMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A K GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  G RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKP-CGQPLARVGEVPPPEARTEPSEPRE  359
            R V++ R+  Q+      K++Y   P  +  + P  G +++RV+ V+  E +   +E+ E
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVSLVSGTELQPATTESSE  354

Query  360  HTQETGIQRGP  370
              +  +    P
Sbjct  355  AKKADDTASNP  365

5) PSPA7_4434 in NC_009656


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  340 bits (1277),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 194/371 (53%), Positives = 269/371 (73%), Gaps = 10/371 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  E  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RARNW
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            L   V  E  TG R+ ITPAWFWL  FE FYYTGIRLNALLC+R  ++D +++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A + GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  G RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RAVLHARSLAQGALENVRKVDFSGSPQASAKPKP-CGQPLARVSEAPPPEVRTEPAEPRE  359
            R V++ R+  Q+      K+++   P  +  + P  G +++RVS  +  E++   +E+ E
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVSLVSGTELQPATTESSE  354

Query  360  HTPGTGIQGGP  370
               + +  + P
Sbjct  355  AKKADDTASNP  365

6) AvCA6_36590 in NC_021150


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  340 bits (1276),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 196/336 (59%), Positives = 254/336 (76%), Gaps = 3/336 (0%)

Query  1    MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKG  60
            MT  EL+Q YI  H+LRP +  IY+AATKA    FG  +  +T  +R +L WR   LA+ 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLACETT-HRDMLEWRRSELAR-  61

Query  61   LAKRSWNTYSTHLRTIWGYAIEYGLLPQQPNPFKKTAVRPPKRASKTVASDAIHRARRWL  120
            ++KRSWNTYS+HLRT+  YA+E GL+  + NP+K T V P KR+ KT+++D I RAR WL
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLVELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNWL  121

Query  121  DSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALLCLRVQDVDWDRQLILIRGDT  180
              LV+EE  TG+RS ITPAWFWLA FE FYYTGIRLNALLCLR ++VD +++LI +RG+T
Sbjct  122  RFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGET  181

Query  181  EKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEAM  240
            EKTHRE+ +PI +GL PH+  ++D AK+ GF  TDQ+FN+NRFS HY+R  MN+DQVEAM
Sbjct  182  EKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEAM  241

Query  241  YRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHMR  300
            Y+KL +  G RMTPHRFRHT+AS+LMRQPERNIH+TK+LLNHSNIATTM YIE DYD MR
Sbjct  242  YKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLMR  301

Query  301  EVLHERSLQRNAAPF-VRCEDASGAPPRDRASAPRL  335
            EV++ER+ Q+    + VR   + ++ P   ++ PR+
Sbjct  302  EVMNERGQQQAKINYLVRPIIPKSSGPAAGSAVPRV  337

7) AvCA_36590 in NC_021149


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  340 bits (1276),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 196/336 (59%), Positives = 254/336 (76%), Gaps = 3/336 (0%)

Query  1    MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKG  60
            MT  EL+Q YI  H+LRP +  IY+AATKA    FG  +  +T  +R +L WR   LA+ 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLACETT-HRDMLEWRRSELAR-  61

Query  61   LAKRSWNTYSTHLRTIWGYAIEYGLLPQQPNPFKKTAVRPPKRASKTVASDAIHRARRWL  120
            ++KRSWNTYS+HLRT+  YA+E GL+  + NP+K T V P KR+ KT+++D I RAR WL
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLVELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNWL  121

Query  121  DSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALLCLRVQDVDWDRQLILIRGDT  180
              LV+EE  TG+RS ITPAWFWLA FE FYYTGIRLNALLCLR ++VD +++LI +RG+T
Sbjct  122  RFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGET  181

Query  181  EKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEAM  240
            EKTHRE+ +PI +GL PH+  ++D AK+ GF  TDQ+FN+NRFS HY+R  MN+DQVEAM
Sbjct  182  EKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEAM  241

Query  241  YRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHMR  300
            Y+KL +  G RMTPHRFRHT+AS+LMRQPERNIH+TK+LLNHSNIATTM YIE DYD MR
Sbjct  242  YKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLMR  301

Query  301  EVLHERSLQRNAAPF-VRCEDASGAPPRDRASAPRL  335
            EV++ER+ Q+    + VR   + ++ P   ++ PR+
Sbjct  302  EVMNERGQQQAKINYLVRPIIPKSSGPAAGSAVPRV  337

8) Avin_36590 in NC_012560


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  340 bits (1276),  Expect = 8e-95, Method: Compositional matrix adjust.
 Identities = 196/336 (59%), Positives = 254/336 (76%), Gaps = 3/336 (0%)

Query  1    MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKG  60
            MT  EL+Q YI  H+LRP +  IY+AATKA    FG  +  +T  +R +L WR   LA+ 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLACETT-HRDMLEWRRSELAR-  61

Query  61   LAKRSWNTYSTHLRTIWGYAIEYGLLPQQPNPFKKTAVRPPKRASKTVASDAIHRARRWL  120
            ++KRSWNTYS+HLRT+  YA+E GL+  + NP+K T V P KR+ KT+++D I RAR WL
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLVELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNWL  121

Query  121  DSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALLCLRVQDVDWDRQLILIRGDT  180
              LV+EE  TG+RS ITPAWFWLA FE FYYTGIRLNALLCLR ++VD +++LI +RG+T
Sbjct  122  RFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGET  181

Query  181  EKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEAM  240
            EKTHRE+ +PI +GL PH+  ++D AK+ GF  TDQ+FN+NRFS HY+R  MN+DQVEAM
Sbjct  182  EKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEAM  241

Query  241  YRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHMR  300
            Y+KL +  G RMTPHRFRHT+AS+LMRQPERNIH+TK+LLNHSNIATTM YIE DYD MR
Sbjct  242  YKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLMR  301

Query  301  EVLHERSLQRNAAPF-VRCEDASGAPPRDRASAPRL  335
            EV++ER+ Q+    + VR   + ++ P   ++ PR+
Sbjct  302  EVMNERGQQQAKINYLVRPIIPKSSGPAAGSAVPRV  337

9) PA14_51650 in NC_008463


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  337 bits (1263),  Expect = 9e-94, Method: Compositional matrix adjust.
 Identities = 191/371 (52%), Positives = 268/371 (73%), Gaps = 10/371 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  E  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RARNW
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180
            L   V  E  TG R+ ITPAWFWL  FE FY+TGIRLNALLC+R  ++D  ++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A + GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  G RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKP-CGQPLARMGEAPPQEARTEPAEPRE  359
            R V++ R+  Q+      K++Y   P  +  + P  G +++R++  +  E +   +E+ E
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVSLVSGTELQPATTESSE  354

Query  360  HTPGTGIQGDA  370
               + +  +++
Sbjct  355  AKKADDTASNP  365

10) PADK2_24130 in NC_018080


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  335 bits (1258),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 189/371 (51%), Positives = 269/371 (73%), Gaps = 10/371 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVHDVDHRAVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  +  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARSW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RAR+W
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            L   V  E  TG R+ ITPAWFWL  FE FYYTGIRLNALLC+R  ++D +++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A + GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVAVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  + RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKP-CGQPLARMGEAPPQEARTEPAEPRE  359
            R V++ R+  Q+      K++Y   P  +  + P  G +++R++  +  E +   +E+ E
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVSLVSGTELQPATTESSE  354

Query  360  HTPGTGIQGDA  370
               + +  +++
Sbjct  355  AKKADDTASNP  365

11) NCGM2_1785 in NC_017549


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  333 bits (1249),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 188/344 (55%), Positives = 257/344 (75%), Gaps = 10/344 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQDVDHRAVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  +  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARHW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RAR+W
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LNMQVGAERGTGERARITPAWFWLCTFEVFYFTGIRLNALLCIRKRDIDWENQLILIRGE  180
            L   V  E +TG R+ ITPAWFWL  FE FY+TGIRLNALLC+R  ++D  ++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A + GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  G RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RTVLHARSLAQGALENIRKVDYSGSPQASAKPKP-CGQPLARVS  343
            R V++ R+  Q+      K++Y   P  +  + P  G +++RVS
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVS  338

12) G655_20460 in NC_020912


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  332 bits (1247),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 189/344 (55%), Positives = 257/344 (75%), Gaps = 10/344 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  E  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RARNW
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            L   V  E  TG R+ ITPAWFWL  FE FYYTGIRLNALLC+R  ++D +++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A + GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  G RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKP-CGQPLARMG  343
            R V++ R+  Q+      K++Y   P  +  + P  G +++R++
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVS  338

13) G655_23935 in NC_020912


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  332 bits (1247),  Expect = 2e-92, Method: Compositional matrix adjust.
 Identities = 189/344 (55%), Positives = 257/344 (75%), Gaps = 10/344 (2%)

Query  1    MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVQEVDHRSVLGWRRKVLEQG  60
            MT  +LT+EYI++HDLR  + KIY+AATKA ++ FG   +  E  HR +L WRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSNHLRTIWGYAIEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARNW  120
            +SKRSWNTYS+HLRT+  YA+EH LV + +VNP++ T V+P +R+ KT++ + I+RARNW
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNALLCIRKRDIDWDNQLILIRGE  180
            L   V  E  TG R+ ITPAWFWL  FE FYYTGIRLNALLC+R  ++D +++LI +RGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA  240
            TEKTH+EF++PI +GL+PHL  +++ A + GF++ DQ+FN+NRFS HYK   MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHM  300
            MY+KLT+  G RMTPHRFRHT+A++LM+ PERNIH+TK LLNHSNI TTM YIE+DYD M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  RAVLHARSLAQGALENVRKVDYSGSPQASAKPKP-CGQPLARMG  343
            R V++ R+  Q+      K++Y   P  +  + P  G +++R++
Sbjct  301  REVMNERGQQQA------KINYLVRPIIPKSSGPAAGSAVPRVS  338

14) PSPA7_4530 in NC_009656


> AJ870974|104|G100|68637936|CAI36141.1|Pseudomonas_syringae_pv._phaseolicola_1302A|+|105384..106805|xerC|-|putative 
integrase 
XerC
Length=473

 Score =  311 bits (1164),  Expect = 6e-86, Method: Compositional matrix adjust.
 Identities = 186/334 (56%), Positives = 248/334 (75%), Gaps = 5/334 (1%)

Query  1    MTPLQLTEEYLLAHDLREASQKTYRSAARALIRHFGPAVSVQEITHRNILEWRREVLEQG  60
            MT  +LT+EY+L+HDLR  + K Y++A++A +  FG  ++  E THR++LEWRR  L + 
Sbjct  4    MTLPELTQEYILTHDLRPDTVKIYKAATKAYVNFFGECLAC-ETTHRDMLEWRRSELAR-  61

Query  61   LSKRSWNTYSSHLRTIWGHAIESELLTHTQVNPFNKTGVIPPKRPSKTVALDAIQNARAW  120
            +SKRSWNTYSSHLRT+   A+E  L+ + +VNP++ T V+P KRP KT++ D I  AR W
Sbjct  62   ISKRSWNTYSSHLRTVYRYAMEHGLV-ELKVNPLKDTRVMPTKRPKKTIGNDVIVRARNW  120

Query  121  LKVQESSEHCTGERAQITPAWFWRCVFETFYDTGIRLNALLCIRKCDVQWDNRIIVVRGE  180
            L+     E  TG R++ITPAWFW  VFETFY TGIRLNALLC+R  +V+ ++R+I VRGE
Sbjct  121  LRFLVQEELSTGKRSEITPAWFWLAVFETFYYTGIRLNALLCLRYENVDLGQRLIRVRGE  180

Query  181  TEKTHREFSIPITDGMAPHIHRLLNEAETAGIKSTDQLFNVNRFSPHYSRQEMNSDQVEA  240
            TEKTHREF IPI DG+ PH+  +++ A   G+ +TDQ+FN+NRFS HY R+ MNSDQVEA
Sbjct  181  TEKTHREFMIPIPDGLMPHLVLVMDTAKKVGFSGTDQVFNINRFSGHYKREYMNSDQVEA  240

Query  241  MYRKLTEKVGVRMTPHRFRHTLASDLMKQPKRNIHVAKSLLNHSNIQTTMSYIEVDLDQM  300
            MY+KLT+  G RMTPHRFRHT+AS+LM+QP RNIH++K+LLNHSNI TTM YIE D D M
Sbjct  241  MYKKLTNMTGTRMTPHRFRHTIASELMRQPERNIHITKNLLNHSNIATTMEYIEPDYDLM  300

Query  301  QAVLDERRQAHDALRH--RHKIDYSRSPQAAAPV  332
            + V++ER Q +  +    R  I  S +P A+++V
Sbjct  301  REVMNERGQQQAKINYLVRPIIPKSSGPAAGSAV  334