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Homologs of orf319 gene of NC_003197_P2

237

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SE451236_12810
( YP_008265588.1 )

membrane protein

NC_021820
(Salmonella enterica 08-1736)

7e-153

100

2) orf319
( YP_005237257.1 )

putative inner membrane protein

NC_016856
(Salmonella enterica 14028S)

7e-153

100

3) SEEH1578_16180
( YP_008247295.1 )

hypothetical protein

NC_021810
(Salmonella enterica 41578)

7e-153

100

4) SU5_02006
( YP_006087640.1 )

hypothetical protein

NC_017623
(Salmonella enterica B182)

7e-153

100

5) CFSAN001921_10205
( YP_008255414.1 )

membrane protein

NC_021814
(Salmonella enterica CFSAN001921)

7e-153

100

6) CFSAN002069_02055
( YP_008249271.1 )

membrane protein

NC_021812
(Salmonella enterica CFSAN002069)

7e-153

100

7) STMMW_13941
( YP_005232448.1 )

putative pathogenicity island protein

NC_016854
(Salmonella enterica D23580)

7e-153

100

8) orf319
( NP_460354.1 )

inner membrane protein

NC_003197
(Salmonella enterica LT2)

7e-153

100

9) SL1344_1323
( YP_005181233.1 )

putative pathogenicity island protein

NC_016810
(Salmonella enterica SL1344)

7e-153

100

10) SNSL254_A1502
( YP_002040643.1 )

hypothetical protein

NC_011080
(Salmonella enterica SL254)

7e-153

100

11) SeHA_C1523
( YP_002045394.1 )

pathogenicity island protein

NC_011083
(Salmonella enterica SL476)

7e-153

100

12) STM474_1394
( YP_005242289.1 )

putative inner membrane protein

NC_016857
(Salmonella enterica ST4/74)

7e-153

100

13) STMDT12_C14050
( YP_005247101.1 )

putative pathogenicity island protein

NC_016860
(Salmonella enterica T000240)

7e-153

100

14) STU288_03265
( YP_007901758.1 )

hypothetical protein

NC_021151
(Salmonella enterica U288)

7e-153

100

15) STMUK_1355
( YP_005251893.1 )

putative inner membrane protein

NC_016863
(Salmonella enterica UK-1)

7e-153

100

16) SN31241_24610
( YP_008360377.1 )

YbgA

NC_021902
(Salmonella enterica USMARC-S3124.1)

7e-153

100

17) SPC_2340
( YP_002637898.1 )

pathogenicity island protein

NC_012125
(Salmonella enterica RKS4594)

1e-152

18) STY1731
( NP_456139.1 )

putative pathogenicity island protein

NC_003198
(Salmonella enterica CT18)

9e-153

19) STBHUCCB_13490
( YP_005216907.1 )

hypothetical protein

NC_016832
(Salmonella enterica P-stx-12)

9e-153

20) SeAg_B1782
( YP_002146651.1 )

pathogenicity island protein

NC_011149
(Salmonella enterica SL483)

9e-153

21) t1257
( NP_805060.1 )

pathogenicity island protein

NC_004631
(Salmonella enterica Ty2)

9e-153

22) TY21A_06395
( YP_007925583.1 )

putative pathogenicity island protein

NC_021176
(Salmonella enterica Ty21a)

9e-153

23) SeSA_A1486
( YP_002114404.1 )

pathogenicity island protein

NC_011094
(Salmonella enterica CVM19633)

2e-152

24) SC1410
( YP_216397.1 )

inner membrane protein

NC_006905
(Salmonella enterica SC-B67)

2e-152

25) CFSAN002050_13340
( YP_008260579.1 )

membrane protein

NC_021818
(Salmonella enterica CFSAN002050)

3e-152

26) CFSAN001992_04645
( YP_007470687.1 )

pathogenicity island protein

NC_020307
(Salmonella enterica CFSAN001992)

3e-152

27) SSPA1362
( YP_002142201.1 )

pathogenicity island protein

NC_011147
(Salmonella enterica AKU12601)

4e-152

28) SPA1464
( YP_150715.1 )

pathogenicity island protein

NC_006511
(Salmonella enterica ATCC 9150)

4e-152

29) SEEB0189_12590
( YP_008308833.1 )

membrane protein

NC_021844
(Salmonella enterica CFSAN000189)

1e-151

30) orf319
( YP_002226696.1 )

pathogenicity island protein

NC_011274
(Salmonella enterica 287/91)

6e-152

31) SeD_A1953
( YP_002215739.1 )

inner membrane protein

NC_011205
(Salmonella enterica CT_02021853)

6e-152

32) orf319
( YP_002243756.1 )

pathogenicity island protein

NC_011294
(Salmonella enterica P125109)

6e-152

33) I137_05550
( YP_008380620.1 )

membrane protein

NC_021984
(Salmonella enterica S06004)

6e-152

34) SPUCDC_1207
( YP_008480878.1 )

putative pathogenicity island protein

NC_022221
(Salmonella enterica CDC1983-67)

7e-152

35) SPUL_1206
( YP_005212415.1 )

putative pathogenicity island protein

NC_016831
(Salmonella enterica RKS5078)

7e-152

36) SARI_01592
( YP_001570628.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-147

37) SBG_1230
( YP_004730100.1 )

pathogenicity island protein

NC_015761
(Salmonella bongori NCTC 12419)

6e-146

38) A464_1421
( YP_008322017.1 )

hypothetical protein

NC_021870
(Salmonella bongori N268-08)

7e-146

39) SBOV13871
( YP_008505255.1 )

putative inner membrane protein

NC_022241
(Salmonella enterica 3114)

1e-139

40) UMN798_1447
( YP_005396789.1 )

pathogenicity island protein

NC_017046
(Salmonella enterica 798)

6e-140

100

41) SPAB_01939
( YP_001588162.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

6e-140

100

42) Dd586_3039
( YP_003334580.1 )

hypothetical protein

NC_013592
(Dickeya dadantii Ech586)

9e-136

43) Dd1591_1174
( YP_003003520.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

6e-135

44) ybgA
( YP_004949936.1 )

protein YbgA

NC_016514
(Enterobacter cloacae EcWSU1)

4e-131

45) A3UG_00435
( YP_006475542.1 )

protein YbgA

NC_018079
(Enterobacter cloacae SDM)

6e-130

46) ECENHK_00520
( YP_006576625.1 )

inner membrane protein

NC_018405
(Enterobacter cloacae ENHKU01)

1e-129

47) H650_01395
( YP_008106134.1 )

membrane protein

NC_021500
(Enterobacter sp. R4-368)

2e-129

48) KPK_4919
( YP_002240700.1 )

hypothetical protein

NC_011283
(Klebsiella pneumoniae 342)

1e-127

49) KP1_0672
( YP_002917588.1 )

hypothetical protein

NC_012731
(Klebsiella pneumoniae NTUH-K2044)

1e-127

50) Kvar_4552
( YP_003441458.1 )

hypothetical protein

NC_013850
(Klebsiella variicola At-22)

1e-127

51) KPN2242_01750
( YP_005952839.1 )

hypothetical protein

NC_017540
(Klebsiella pneumoniae KCTC 2242)

2e-127

52) KPN_04726
( YP_001338343.1 )

hypothetical protein

NC_009648
(Klebsiella pneumoniae subsp. pneumoniae MGH 78578)

3e-127

53) ybgA
( YP_007989769.1 )

hypothetical protein

NC_021232
(Klebsiella pneumoniae SB3432)

3e-127

54) KOX_18895
( YP_005019740.1 )

hypothetical protein

NC_016612
(Klebsiella oxytoca KCTC 1686)

5e-127

55) ROD_37331
( YP_003367173.1 )

hypothetical protein

NC_013716
(Citrobacter rodentium ICC168)

1e-126

56) RORB6_05710
( YP_007873387.1 )

hypothetical protein

NC_021066
(Raoultella ornithinolytica B6)

1e-126

57) PCC21_014980
( YP_006646154.1 )

pathogenicity island protein

NC_018525
(Pectobacterium carotovorum PCC21)

3e-125

58) ENC_03080
( YP_007844442.1 )

hypothetical protein

NC_021046
(Enterobacter cloacae NCTC 9394)

5e-125

59) Ent638_0062
( YP_001174803.1 )

hypothetical protein

NC_009436
(Enterobacter sp. 638)

2e-124

60) SeSA_B0012
( YP_002112894.1 )

putative pathogenicity island protein

NC_011092
(Salmonella enterica CVM19633)

4e-124

61) ybgA
( YP_209456.1 )

putative pathogenicity island protein

NC_006856
(Salmonella enterica SC-B67)

4e-124

62) Entas_0076
( YP_004826617.1 )

hypothetical protein

NC_015968
(Enterobacter asburiae LF7a)

9e-123

63) ST548_p6470
( YP_007388128.1 )

COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA

NC_020181
(Enterobacter aerogenes EA1509E)

2e-122

64) EAE_16605
( YP_004593511.1 )

hypothetical protein

NC_015663
(Enterobacter aerogenes KCTC 2190)

2e-122

65) ECL_00084
( YP_003610601.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

5e-118

66) KPHS_05690
( YP_005224869.1 )

hypothetical protein

NC_016845
(Klebsiella pneumoniae HS11286)

1e-115

67) N559_4576
( YP_008427455.1 )

hypothetical protein

NC_022082
(Klebsiella pneumoniae JM45)

1e-115

68) A79E_4432
( YP_006638193.1 )

hypothetical protein

NC_018522
(Klebsiella pneumoniae 1084)

1e-115

69) CE10_0522
( YP_006142647.1 )

hypothetical protein

NC_017646
(Escherichia coli CE10)

1e-114

70) EFER_2704
( YP_002383810.1 )

hypothetical protein

NC_011740
(Escherichia fergusonii ATCC 35469)

1e-114

71) ECUMN_1408
( YP_002412157.1 )

hypothetical protein

NC_011751
(Escherichia coli UMN026)

2e-113

72) EcHS_A1648
( YP_001458352.1 )

hypothetical protein

NC_009800
(Escherichia coli HS)

6e-113

73) D782_3150
( YP_007341279.1 )

hypothetical protein

NC_020063
(Enterobacteriaceae bacterium FGI 57)

2e-104

74) Entcl_3117
( YP_003942647.1 )

hypothetical protein

NC_014618
(Enterobacter cloacae SCF1)

6e-101

75) ESA_02639
( YP_001438715.1 )

hypothetical protein

NC_009778
(Cronobacter sakazakii ATCC BAA-894)

4e-99

76) Q7S_15965
( YP_005402973.1 )

hypothetical protein

NC_017047
(Rahnella aquatilis HX2)

1e-98

77) Rahaq_3165
( YP_004213886.1 )

hypothetical protein

NC_015061
(Rahnella sp. Y9602)

1e-98

78) ES15_2720
( YP_006343804.1 )

hypothetical protein

NC_017933
(Cronobacter sakazakii ES15)

7e-99

79) CSSP291_12470
( YP_007441366.1 )

hypothetical protein

NC_020260
(Cronobacter sakazakii Sp291)

7e-99

80) Rahaq2_3195
( YP_005201150.1 )

hypothetical protein

NC_016818
(Rahnella aquatilis CIP 78.65)

7e-99

81) CTU_13160
( YP_003209679.1 )

hypothetical protein

NC_013282
(Cronobacter turicensis z3032)

7e-98

82) PC1_1223
( YP_003016807.1 )

hypothetical protein

NC_012917
(Pectobacterium carotovorum PC1)

2e-96

83) SerAS9_1224
( YP_004504624.1 )

hypothetical protein

NC_015567
(Serratia plymuthica AS9)

2e-96

84) SerAS12_1224
( YP_004499672.1 )

hypothetical protein

NC_015566
(Serratia sp. AS12)

2e-96

85) SerAS13_1224
( YP_006024086.1 )

hypothetical protein

NC_017573
(Serratia sp. AS13)

2e-96

86) PCC21_012550
( YP_006645911.1 )

hypothetical protein

NC_018525
(Pectobacterium carotovorum PCC21)

4e-96

87) SMWW4_v1c12150
( YP_007405038.1 )

hypothetical protein, DUF1722 family

NC_020211
(Serratia marcescens WW4)

4e-96

88) Dd586_1176
( YP_003332765.1 )

hypothetical protein

NC_013592
(Dickeya dadantii Ech586)

7e-96

89) PMI0989
( YP_002150740.1 )

hypothetical protein

NC_010554
(Proteus mirabilis HI4320)

9e-96

90) A225_2662
( YP_006498377.1 )

hypothetical protein

NC_018106
(Klebsiella oxytoca E718)

1e-95

91) ybgA
( YP_008137317.1 )

YbgA

NC_021591
(Serratia odorifera 4Rx13)

1e-95

92) M621_06295
( YP_008158084.1 )

membrane protein

NC_021659
(Serratia plymuthica S13)

1e-95

93) Ser39006_1860
( YP_008522242.1 )

protein of unknown function DUF1722

NC_022268
(Serratia sp. ATCC 39006)

3e-95

94) Dd703_1133
( YP_002986760.1 )

hypothetical protein

NC_012880
(Dickeya dadantii Ech703)

3e-95

95) W5S_3104
( YP_006284056.1 )

DUF523 and DUF1722 domain-containing protein

NC_017845
(Pectobacterium sp. SCC3193)

3e-95

96) M495_05625
( YP_008229085.1 )

membrane protein

NC_021741
(Serratia liquefaciens ATCC 27592)

3e-95

97) Dda3937_01547
( YP_003882101.1 )

hypothetical protein

NC_014500
(Dickeya dadantii 3937)

1e-94

98) Dd1591_2925
( YP_003005226.1 )

hypothetical protein

NC_012912
(Dickeya zeae Ech1591)

1e-94

99) BB2000_1027
( YP_008397582.1 )

hypothetical protein

NC_022000
(Proteus mirabilis BB2000)

1e-94

100) Pecwa_3113
( YP_003260462.1 )

hypothetical protein

NC_013421
(Pectobacterium wasabiae WPP163)

2e-94

101) Spro_1251
( YP_001477483.1 )

hypothetical protein

NC_009832
(Serratia proteamaculans 568)

7e-94

102) EbC_12830
( YP_003740665.1 )

pathogenicity island protein

NC_014306
(Erwinia billingiae Eb661)

2e-93

103) ETA_23190
( YP_001908243.1 )

pathogenicity island protein

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-92

104) EAM_1159
( YP_003538246.1 )

hypothetical protein

NC_013971
(Erwinia amylovora ATCC 49946)

7e-92

105) ybgA
( YP_003530514.1 )

hypothetical protein

NC_013961
(Erwinia amylovora CFBP1430)

7e-92

106) ybgA
( YP_003930187.1 )

hypothetical protein

NC_014562
(Pantoea vagans C9-1)

1e-91

107) ybgA
( YP_005933355.1 )

pathogenicity Island protein YbgA

NC_017531
(Pantoea ananatis AJ13355)

3e-91

108) ybgA
( YP_003519454.1 )

hypothetical protein

NC_013956
(Pantoea ananatis LMG 20103)

3e-91

109) ybgA
( YP_005196560.1 )

hypothetical protein

NC_016816
(Pantoea ananatis LMG 5342)

3e-91

110) PAGR_g3000
( YP_005993716.1 )

pathogenicity Island protein YbgA

NC_017554
(Pantoea ananatis PA13)

3e-91

111) EJP617_22760
( YP_005818844.1 )

Putative pathogenicity island protein

NC_017445
(Erwinia sp. Ejp617)

4e-91

112) D781_1173
( YP_007343677.1 )

hypothetical protein

NC_020064
(Serratia marcescens FGI94)

4e-91

113) ybgA
( YP_005803406.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

2e-90

114) EpC_24530
( YP_002649449.1 )

pathogenicity island protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

2e-90

115) ECA1348
( YP_049454.1 )

hypothetical protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-89

116) Pat9b_1100
( YP_004114978.1 )

hypothetical protein

NC_014837
(Pantoea sp. At-9b)

8e-89

117) ETAE_2598
( YP_003296644.1 )

hypothetical protein

NC_013508
(Edwardsiella tarda EIB202)

3e-88

118) ybgA
( YP_005699934.1 )

hypothetical protein

NC_017309
(Edwardsiella tarda FL6-60)

3e-88

119) ETAC_12490
( YP_007629979.1 )

hypothetical protein

NC_020796
(Edwardsiella tarda C07-087)

5e-88

120) SG0867
( YP_454547.1 )

hypothetical protein

NC_007712
(Sodalis glossinidius morsitans)

2e-86

121) ECB_01523
( YP_003044726.1 )

putative pathogenicity island protein

NC_012967
(Escherichia coli REL606)

1e-81

122) NT01EI_2886
( YP_002934282.1 )

Protein of unknown function (DUF1722)

NC_012779
(Edwardsiella ictaluri 93-146)

1e-80

123) GU3_12400
( YP_005092985.1 )

hypothetical protein

NC_016745
(Oceanimonas sp. GK1)

6e-77

124) Fbal_1479
( YP_003912757.1 )

hypothetical protein

NC_014541
(Ferrimonas balearica DSM 9799)

7e-75

125) Sama_0810
( YP_926687.1 )

hypothetical protein

NC_008700
(Shewanella amazonensis SB2B)

1e-72

126) K734_06980
( YP_008034893.1 )

hypothetical protein

NC_021286
(Idiomarina loihiensis GSL 199)

2e-72

127) IL1389
( YP_155778.1 )

hypothetical protein

NC_006512
(Idiomarina loihiensis L2TR)

2e-72

128) B565_3114
( YP_004393766.1 )

hypothetical protein

NC_015424
(Aeromonas veronii B565)

1e-71

129) Shew185_3070
( YP_001367264.1 )

hypothetical protein

NC_009665
(Shewanella baltica OS185)

2e-71

130) Sput200_2853
( YP_006010722.1 )

hypothetical protein

NC_017566
(Shewanella putrefaciens 200)

2e-71

131) Sputcn32_2716
( YP_001184234.1 )

hypothetical protein

NC_009438
(Shewanella putrefaciens CN-32)

2e-71

132) Sputw3181_1296
( YP_962693.1 )

hypothetical protein

NC_008750
(Shewanella sp. W3-18-1)

2e-71

133) Sbal175_1290
( YP_006019873.1 )

hypothetical protein

NC_017571
(Shewanella baltica BA175)

5e-71

134) Sbal117_3197
( YP_006038377.1 )

hypothetical protein

NC_017579
(Shewanella baltica OS117)

5e-71

135) Sbal_3056
( YP_001051407.1 )

hypothetical protein

NC_009052
(Shewanella baltica OS155)

5e-71

136) Sbal195_3213
( YP_001555635.1 )

hypothetical protein

NC_009997
(Shewanella baltica OS195)

5e-71

137) Sbal678_3219
( YP_005274413.1 )

hypothetical protein

NC_016901
(Shewanella baltica OS678)

5e-71

138) Sbal223_1307
( YP_002357238.1 )

hypothetical protein

NC_011663
(Shewanella baltica OS223)

5e-71

139) Shew_1478
( YP_001093604.1 )

hypothetical protein

NC_009092
(Shewanella loihica PV-4)

1e-70

140) Shewmr7_1234
( YP_737290.1 )

hypothetical protein

NC_008322
(Shewanella sp. MR-7)

1e-70

141) SO_3386
( NP_718940.1 )

bifunctional protein of unknown functions DUF523 and DUF1722

NC_004347
(Shewanella oneidensis MR-1)

6e-71

142) Tola_1113
( YP_002892325.1 )

hypothetical protein

NC_012691
(Tolumonas auensis DSM 9187)

1e-70

143) Shewmr4_1163
( YP_733300.1 )

hypothetical protein

NC_008321
(Shewanella sp. MR-4)

3e-70

144) Shewana3_1164
( YP_868805.1 )

hypothetical protein

NC_008577
(Shewanella sp. ANA-3)

2e-69

145) CPS_1379
( YP_268122.1 )

hypothetical protein

NC_003910
(Colwellia psychrerythraea 34H)

2e-69

146) ASA_3232
( YP_001142971.1 )

hypothetical protein

NC_009348
(Aeromonas salmonicida A449)

2e-68

147) Marme_1053
( YP_004312164.1 )

hypothetical protein

NC_015276
(Marinomonas mediterranea MMB-1)

6e-68

148) Sfri_3039
( YP_751716.1 )

hypothetical protein

NC_008345
(Shewanella frigidimarina NCIMB 400)

2e-67

149) AHA_1099
( YP_855641.1 )

hypothetical protein

NC_008570
(Aeromonas hydrophila ATCC 7966)

7e-67

150) AHML_05880
( YP_008042307.1 )

hypothetical protein

NC_021290
(Aeromonas hydrophila ML09-119)

1e-66

151) Mmwyl1_1153
( YP_001340017.1 )

hypothetical protein

NC_009654
(Marinomonas sp. MWYL1)

1e-66

152) Ping_0997
( YP_942435.1 )

hypothetical protein

NC_008709
(Psychromonas ingrahamii 37)

2e-66

153) A458_10985
( YP_006457857.1 )

hypothetical protein

NC_018028
(Pseudomonas stutzeri CCUG 29243)

9e-67

154) Sden_2839
( YP_563841.1 )

hypothetical protein

NC_007954
(Shewanella denitrificans OS217)

3e-66

155) Mar181_2700
( YP_004482650.1 )

hypothetical protein

NC_015559
(Marinomonas posidonica IVIA-Po-181)

7e-66

156) Kkor_2382
( YP_003147559.1 )

hypothetical protein

NC_013166
(Kangiella koreensis DSM 16069)

1e-65

157) T1E_0974
( YP_006531623.1 )

hypothetical protein

NC_018220
(Pseudomonas putida DOT-T1E)

1e-64

158) Psest_2395
( YP_007240547.1 )

hypothetical protein

NC_019936
(Pseudomonas stutzeri RCH2)

2e-64

159) Nwat_2718
( YP_003761805.1 )

hypothetical protein

NC_014315
(Nitrosococcus watsonii C-113)

2e-64

160) H045_00585
( YP_007395689.1 )

hypothetical protein

NC_020209
(Pseudomonas poae RE*1-1-14)

2e-64

161) ybgA
( YP_005210301.1 )

protein YbgA

NC_016830
(Pseudomonas fluorescens F113)

5e-64

162) PST_1966
( YP_001172482.1 )

hypothetical protein

NC_009434
(Pseudomonas stutzeri A1501)

1e-63

163) PSTAB_1862
( YP_004714232.1 )

hypothetical protein

NC_015740
(Pseudomonas stutzeri ATCC 17588)

1e-63

164) PSTAA_1994
( YP_005938631.1 )

hypothetical protein

NC_017532
(Pseudomonas stutzeri DSM 4166)

1e-63

165) Swoo_2778
( YP_001761149.1 )

hypothetical protein

NC_010506
(Shewanella woodyi ATCC 51908)

1e-63

166) Psefu_0936
( YP_004473008.1 )

hypothetical protein

NC_015556
(Pseudomonas fulva 12-X)

1e-63

167) Noc_0394
( YP_342450.1 )

hypothetical protein

NC_007484
(Nitrosococcus oceani ATCC 19707)

2e-63

168) Q7A_826
( YP_006295316.1 )

hypothetical protein

NC_017857
(Methylophaga sp. JAM1)

3e-63

169) PFLU0752
( YP_002870416.1 )

hypothetical protein

NC_012660
(Pseudomonas fluorescens SBW25)

3e-63

170) Q91_0667
( YP_006837208.1 )

hypothetical protein

NC_018697
(Cycloclasticus sp. P1; MCCC 1A01040)

4e-63

171) PflA506_0740
( YP_006322268.1 )

hypothetical protein

NC_017911
(Pseudomonas fluorescens A506)

6e-63

172) PSEBR_a4749
( YP_004356172.1 )

hypothetical protein

NC_015379
(Pseudomonas brassicacearum NFM421)

6e-63

173) Nhal_0236
( YP_003525826.1 )

hypothetical protein

NC_013960
(Nitrosococcus halophilus Nc 4)

1e-62

174) Pmen_1073
( YP_001186572.1 )

hypothetical protein

NC_009439
(Pseudomonas mendocina ymp)

3e-62

175) PCA10_48180
( YP_008105155.1 )

hypothetical protein

NC_021499
(Pseudomonas resinovorans NBRC 106553)

3e-62

176) MDS_1138
( YP_004378921.1 )

hypothetical protein

NC_015410
(Pseudomonas mendocina NK-01)

1e-61

177) Mlg_1208
( YP_742047.1 )

hypothetical protein

NC_008340
(Alkalilimnicola ehrlichii MLHE-1)

2e-61

178) PFL_5145
( YP_262224.1 )

hypothetical protein

NC_004129
(Pseudomonas protegens Pf-5)

3e-61

179) CYCME_1932
( YP_008374606.1 )

hypothetical protein

NC_021917
(Cycloclasticus zancles 7-ME)

4e-61

180) PPUBIRD1_0787
( YP_005928678.1 )

hypothetical protein

NC_017530
(Pseudomonas putida BIRD-1)

1e-60

181) PP_0741
( NP_742902.1 )

hypothetical protein

NC_002947
(Pseudomonas putida KT2440)

1e-60

182) PputUW4_04568
( YP_007031565.1 )

hypothetical protein

NC_019670
(Pseudomonas sp. UW4)

1e-60

183) Pput_0769
( YP_001266117.1 )

hypothetical protein

NC_009512
(Pseudomonas putida F1)

2e-60

184) YSA_06550
( YP_006387415.1 )

hypothetical protein

NC_017986
(Pseudomonas putida ND6)

2e-60

185) PFLCHA0_c51050
( YP_008002358.1 )

hypothetical protein

NC_021237
(Pseudomonas fluorescens CHA0)

2e-60

186) PSPPH_1012
( YP_273283.1 )

hypothetical protein

NC_005773
(Pseudomonas syringae 1448A)

5e-60

187) Pfl01_4734
( YP_350462.1 )

hypothetical protein

NC_007492
(Pseudomonas fluorescens Pf0-1)

6e-60

188) PSPTO_1123
( NP_790957.1 )

hypothetical protein

NC_004578
(Pseudomonas syringae DC3000)

6e-60

189) Psyr_0963
( YP_234057.1 )

hypothetical protein

NC_007005
(Pseudomonas syringae B728a)

7e-60

190) B479_04200
( YP_007227699.1 )

hypothetical protein

NC_019905
(Pseudomonas putida PC9)

4e-59

191) L483_03760
( YP_008092581.1 )

hypothetical protein

NC_021491
(Pseudomonas putida H8234)

5e-59

192) PP4_45380
( YP_008115575.1 )

hypothetical protein

NC_021505
(Pseudomonas putida NBRC 14164)

5e-59

193) PPS_0798
( YP_004700257.1 )

hypothetical protein

NC_015733
(Pseudomonas putida S16)

5e-59

194) PSEEN0883
( YP_606605.1 )

hypothetical protein

NC_008027
(Pseudomonas entomophila L48)

8e-59

195) PputGB1_0782
( YP_001667028.1 )

hypothetical protein

NC_010322
(Pseudomonas putida GB-1)

9e-59

196) Desac_0400
( YP_004369470.1 )

hypothetical protein

NC_015388
(Desulfobacca acetoxidans DSM 11109)

1e-57

197) PputW619_4448
( YP_001751297.1 )

hypothetical protein

NC_010501
(Pseudomonas putida W619)

5e-58

198) Adeh_3029
( YP_466235.1 )

hypothetical protein

NC_007760
(Anaeromyxobacter dehalogenans 2CP-C)

2e-57

199) DaAHT2_2616
( YP_003691896.1 )

hypothetical protein

NC_014216
(Desulfurivibrio alkaliphilus AHT2)

3e-57

200) Desaf_3268
( YP_005053217.1 )

hypothetical protein

NC_016629
(Desulfovibrio africanus Walvis Bay)

3e-56

201) TERTU_3476
( YP_003074809.1 )

hypothetical protein

NC_012997
(Teredinibacter turnerae T7901)

4e-56

202) Sde_2713
( YP_528185.1 )

protein of unknown function DUF523

NC_007912
(Saccharophagus degradans 2-40)

5e-56

203) DP2577
( YP_066313.1 )

hypothetical protein

NC_006138
(Desulfotalea psychrophila LSv54)

3e-55

204) NIDE0204
( YP_003795914.1 )

hypothetical protein

NC_014355
(Candidatus Nitrospira defluvii )

1e-54

205) Metme_1702
( YP_004512619.1 )

hypothetical protein

NC_015572
(Methylomonas methanica MC09)

3e-54

206) AvCA_41400
( YP_007895055.1 )

hypothetical protein

NC_021149
(Azotobacter vinelandii CA)

5e-54

207) AvCA6_41400
( YP_007900104.1 )

hypothetical protein

NC_021150
(Azotobacter vinelandii CA6)

5e-54

208) Avin_41400
( YP_002801248.1 )

hypothetical protein

NC_012560
(Azotobacter vinelandii DJ)

5e-54

209) DMR_15940
( YP_002952971.1 )

hypothetical protein

NC_012796
(Desulfovibrio magneticus RS-1)

6e-54

210) TOL2_C00300
( YP_006758904.1 )

hypothetical protein

NC_018645
(Desulfobacula toluolica Tol2)

8e-54

211) Pcar_2712
( YP_006718489.1 )

hypothetical protein

NC_007498
(Pelobacter carbinolicus DSM 2380)

9e-54

212) Dde_3214
( YP_389703.1 )

hypothetical protein

NC_007519
(Desulfovibrio alaskensis G20)

2e-53

213) AnaeK_3126
( YP_002135476.1 )

hypothetical protein

NC_011145
(Anaeromyxobacter sp. K)

3e-52

214) Hhal_0260
( YP_001001856.1 )

hypothetical protein

NC_008789
(Halorhodospira halophila SL1)

1e-51

215) PADK2_24745
( YP_006484914.1 )

hypothetical protein

NC_018080
(Pseudomonas aeruginosa DK2)

1e-51

216) PLES_50441
( YP_002442624.1 )

hypothetical protein

NC_011770
(Pseudomonas aeruginosa LESB58)

1e-51

217) PAM18_4755
( YP_005977337.1 )

hypothetical protein

NC_017548
(Pseudomonas aeruginosa M18)

1e-51

218) PA4658
( NP_253347.1 )

hypothetical protein

NC_002516
(Pseudomonas aeruginosa PAO1)

1e-51

219) M062_24530
( YP_008135298.1 )

hypothetical protein

NC_021577
(Pseudomonas aeruginosa RP73)

1e-51

220) PSPA7_5307
( YP_001350639.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

2e-51

221) A2cp1_3227
( YP_002493627.1 )

hypothetical protein

NC_011891
(Anaeromyxobacter dehalogenans 2CP-1)

2e-51

222) DGI_2487
( YP_008591396.1 )

putative protein of unknown function DUF523

NC_022444
(Desulfovibrio gigas ATCC 19364)

2e-51

223) G655_24570
( YP_007711744.1 )

hypothetical protein

NC_020912
(Pseudomonas aeruginosa B136-33)

3e-51

224) KN400_3181
( YP_006892151.1 )

hypothetical protein

NC_017454
(Geobacter sulfurreducens KN400)

4e-51

225) GSU3251
( NP_954292.1 )

hypothetical protein

NC_002939
(Geobacter sulfurreducens PCA)

4e-51

226) PA14_61610
( YP_793120.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

1e-50

227) DvMF_1786
( YP_002436198.1 )

hypothetical protein

NC_011769
(Desulfovibrio vulgaris Miyazaki F)

2e-50

228) NCGM2_0929
( YP_005979190.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

9e-51

229) Anae109_3008
( YP_001380189.1 )

hypothetical protein

NC_009675
(Anaeromyxobacter sp. Fw109-5)

8e-49

230) Dbac_2060
( YP_003158561.1 )

hypothetical protein

NC_013173
(Desulfomicrobium baculatum DSM 4028)

2e-48

231) B005_1518
( YP_006640637.1 )

hypothetical protein

NC_018524
(Nocardiopsis alba ATCC BAA-2165)

2e-47

232) Gbem_3230
( YP_002140025.1 )

hypothetical protein

NC_011146
(Geobacter bemidjiensis Bem)

1e-46

233) GM21_1034
( YP_003020853.1 )

hypothetical protein

NC_012918
(Geobacter sp. M21)

3e-45

234) Dvul_0395
( YP_965845.1 )

hypothetical protein

NC_008751
(Desulfovibrio vulgaris DP4)

4e-44

235) DVU2976
( YP_012187.1 )

hypothetical protein

NC_002937
(Desulfovibrio vulgaris Hildenborough)

4e-44

236) Deval_2749
( YP_005703529.1 )

hypothetical protein

NC_017310
(Desulfovibrio vulgaris RCH1)

4e-44

237) Rmar_1609
( YP_003290883.1 )

hypothetical protein

NC_013501
(Rhodothermus marinus DSM 4252)

1e-43

• Sequence Alignments

1) SE451236_12810 in NC_021820


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

2) SEEH1578_16180 in NC_021810


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

3) SU5_02006 in NC_017623


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

4) CFSAN002069_02055 in NC_021812


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

5) SeHA_C1523 in NC_011083


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

6) SNSL254_A1502 in NC_011080


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

7) SN31241_24610 in NC_021902


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

8) orf319 in NC_016856


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

9) STMMW_13941 in NC_016854


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

10) orf319 in NC_003197


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

11) SL1344_1323 in NC_016810


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

12) STM474_1394 in NC_016857


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

13) STMDT12_C14050 in NC_016860


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

14) STU288_03265 in NC_021151


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

15) STMUK_1355 in NC_016863


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

16) CFSAN001921_10205 in NC_021814


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  533 bits (2010),  Expect = 7e-153, Method: Compositional matrix adjust.
 Identities = 319/319 (100%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

17) SPC_2340 in NC_012125


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  532 bits (2007),  Expect = 1e-152, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

18) SeAg_B1782 in NC_011149


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  532 bits (2009),  Expect = 9e-153, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

19) STY1731 in NC_003198


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  532 bits (2009),  Expect = 9e-153, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

20) STBHUCCB_13490 in NC_016832


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  532 bits (2009),  Expect = 9e-153, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

21) TY21A_06395 in NC_021176


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  532 bits (2009),  Expect = 9e-153, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

22) t1257 in NC_004631


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  532 bits (2009),  Expect = 9e-153, Method: Compositional matrix adjust.
 Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

23) SC1410 in NC_006905


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  531 bits (2005),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPILRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDP+LRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

24) SeSA_A1486 in NC_011094


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  531 bits (2005),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFTDRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAF+DRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIN  319
            SQNYFEPYPDTLGLRLAI 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

25) CFSAN002050_13340 in NC_021818


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  531 bits (2002),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 317/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFAARFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFA RFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

26) CFSAN001992_04645 in NC_020307


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  530 bits (2001),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 315/319 (99%), Positives = 317/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFTDRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAF+DRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIN  319
            SQNYFEPYPDTLGLRLAI 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

27) SSPA1362 in NC_011147


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  530 bits (2001),  Expect = 4e-152, Method: Compositional matrix adjust.
 Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPNCPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKP CPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

28) SPA1464 in NC_006511


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  530 bits (2001),  Expect = 4e-152, Method: Compositional matrix adjust.
 Identities = 317/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVAYKPNCPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWVAYKP CPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

29) SEEB0189_12590 in NC_021844


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1995),  Expect = 1e-151, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 317/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGA+VRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRALGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRA GLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

30) SeD_A1953 in NC_011205


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1998),  Expect = 6e-152, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWGDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEW+DLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGQLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAG+LPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

31) orf319 in NC_011294


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1998),  Expect = 6e-152, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWGDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEW+DLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGQLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAG+LPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

32) orf319 in NC_011274


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1998),  Expect = 6e-152, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWGDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEW+DLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGQLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAG+LPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

33) I137_05550 in NC_021984


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1998),  Expect = 6e-152, Method: Compositional matrix adjust.
 Identities = 316/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWGDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEW+DLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGQLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAG+LPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

34) SPUCDC_1207 in NC_022221


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1997),  Expect = 7e-152, Method: Compositional matrix adjust.
 Identities = 315/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWGDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEW+DLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRSGQLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYR+G+LPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

35) SPUL_1206 in NC_016831


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  529 bits (1997),  Expect = 7e-152, Method: Compositional matrix adjust.
 Identities = 315/319 (99%), Positives = 318/319 (99%), Gaps = 0/319 (0%)

Query  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRL  60
            MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWV YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180
            KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWGDLDAFFVRYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEW+DLDAFFVRYREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRSGQLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYR+G+LPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  SQNYFEPYPDTLGLRLAIT  319
            SQNYFEPYPDTLGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

36) SARI_01592 in NC_010067


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  515 bits (1944),  Expect = 1e-147, Method: Compositional matrix adjust.
 Identities = 297/319 (94%), Positives = 313/319 (99%), Gaps = 0/319 (0%)

Query  1    MKNKPVIGISECLTGAAVRFDGGHKRMDFVMNSLAPWVTYKTICPEVAIGLPVPRPALRL  60
            M+NKPV+GIS CLTGA+VRFDGGHKRMDFVMNSLAPWV+YK ICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTSGDIRMRYSHAPYDDITDKMNAFADRFLPTMGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTT GDIRMRYSHAP DD+T++MNAFADRFLPT+GELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKAGTGLFTAAMMAKYPWLPVEEDGRLHDPVLRENFIERVFALNELNALRAQGLN  180
            KGNRGRKAGTGLFTAAMM KYPWLP+EEDGRLHDPVLRENFI R+FAL+ELNALRAQGL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLEAFFVHYREKLMAILRHPASR  240
            RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDL+AFFV+YREKLMAILRHPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300
            KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFEPYPDTLGLRLTIT  319
            +QNYFEPYPDTLGLRL+IT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

37) SBG_1230 in NC_015761


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  510 bits (1922),  Expect = 6e-146, Method: Compositional matrix adjust.
 Identities = 293/319 (92%), Positives = 313/319 (99%), Gaps = 0/319 (0%)

Query  1    MKNKPVVGISACLTGAAVRFDGGHKRMDFVMNSLAPWVTYKPICPEVAIGLPVPRPALRL  60
            M+NKPVVGIS+CLTGA+VRFDGGHKRMDFVMNSLAPWV+YKPICPEVAIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTRGDIRMRYSHAPHDDVTEQMNAFADRFLPTAGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTT GDIRMRYSHAPHDDVTE+MNAFADRFLPT GELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGHKAGTGLFTAAMMNKYPWLPVEEDGRLHDPVLRENFVERVFALNELNALRAQGLS  180
            KGNRG+KAGTGLFTAAMM+KYPWLP+EEDGRLHDPVLRENF+ R+FAL+ELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQGGYREIGPFVARLHEWDDLEAFFIRYREKLMTILSHPASR  240
            RHSLLAFHSRYKLQLLAHHQ+GYREIGPFVARLHEWDDL+AFF+RYREKLM+IL HPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRTLNSRQRAELREVILRYRAGQLPILAPLTLLKHYLAEHPDAYLR  300
            KNHTNVLMHIQGYFHR+LNSRQRAELREVIL YRAG+LPILAPLTLLKHYLAEHPD YLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFEPYPDTLGLRIAIA  319
            +QNYFEPYPDTLGLR+AI+
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

38) A464_1421 in NC_021870


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  509 bits (1921),  Expect = 7e-146, Method: Compositional matrix adjust.
 Identities = 292/319 (92%), Positives = 313/319 (99%), Gaps = 0/319 (0%)

Query  1    MKNKPVVGISACLTGAAVRFDGGHKRMDFVMNSLAPWVTYKPICPEVAVGLPVPRPALRL  60
            M+NKPVVGIS+CLTGA+VRFDGGHKRMDFVMNSLAPWV+YKPICPEVA+GLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTTRGDIRMRYSHAPHDDVTEQMNAFADRFLPTAGELAGFIVCAKSPSCGMERVRLYDE  120
            IQTT GDIRMRYSHAPHDDVTE+MNAFADRFLPT GELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGHKAGTGLFTAAMMNKYPWLPVEEDGRLHDPVLRENFVERVFALNELNALRAQGLS  180
            KGNRG+KAGTGLFTAAMM+KYPWLP+EEDGRLHDPVLRENF+ R+FAL+ELNALRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHSLLAFHSRYKLQLLAHHQGGYREIGPFVARLHEWDDLEAFFIRYREKLMTILSHPASR  240
            RHSLLAFHSRYKLQLLAHHQ+GYREIGPFVARLHEWDDL+AFF+RYREKLM+IL HPASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFHRTLNSRQRAELREVILRYRAGQLPILAPLTLLKHYLAEHPDAYLR  300
            KNHTNVLMHIQGYFHR+LNSRQRAELREVIL YRAG+LPILAPLTLLKHYLAEHPD YLR
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFEPYPDTLGLRIAIA  319
            +QNYFEPYPDTLGLR+AI+
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

39) SBOV13871 in NC_022241


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  489 bits (1842),  Expect = 1e-139, Method: Compositional matrix adjust.
 Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 0/293 (0%)

Query  1    MDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  60
            MDFVMNSLAPWV YKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  120
            FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  240
            GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  293
            REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

40) SPAB_01939 in NC_010102


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  489 bits (1845),  Expect = 6e-140, Method: Compositional matrix adjust.
 Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%)

Query  1    MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  60
            MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  120
            FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  240
            GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  293
            REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

41) UMN798_1447 in NC_017046


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  489 bits (1845),  Expect = 6e-140, Method: Compositional matrix adjust.
 Identities = 293/293 (100%), Positives = 293/293 (100%), Gaps = 0/293 (0%)

Query  1    MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  60
            MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  120
            FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  240
            GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  293
            REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

42) Dd586_3039 in NC_013592


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  476 bits (1794),  Expect = 9e-136, Method: Compositional matrix adjust.
 Identities = 256/319 (81%), Positives = 299/319 (94%), Gaps = 0/319 (0%)

Query  15   IDSKPVLGISGCLTGSTVRFDGGHKRLRFVMDELSPWIAFRPVCPEMSIGLPVPRPALRL  74
            +++KPV+GISGCLTG+TVRFDGGHKR+ FVM+ L+PW+A++P+CPE++IGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  75   IQTTSGDIRMRMSHDTQQDMTEKMDDFTARYLPTIGNLAGFIVCAKSPSCGMERVRLYDE  134
            IQTT GDIRMR SH  ++D+TE+M+ F+ R+LPTIG+LAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  135  QGHRGRKAGVGLFTTALMKTYPWLPVEEDGRLHDPVLRENFVERLFALHELNQLRAGGLT  194
            +G+RGRKAG GLFT+A+M  YPWLP+EEDGRLHDPVLRENF+ R+FALHELN LRA GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  195  RHNLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFIAYRYKLMAILRQPASR  254
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFF+ YR KLMAILR+PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  255  KNHTNVLMHIQGYFRKQLNNRQRAELREVIIGYRAGRLPILAPITLLKHYLAEHPDSYLL  314
            KNHTNVLMHIQGYF++ LN+RQRAELREVI+GYRAGRLPILAP+TLLKHYLAEHPD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  315  TQNYFDPYPQDLGLRLAVA  333
            +QNYF+PYP+ LGLRLA++
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

43) Dd1591_1174 in NC_012912


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  473 bits (1783),  Expect = 6e-135, Method: Compositional matrix adjust.
 Identities = 256/319 (81%), Positives = 299/319 (94%), Gaps = 0/319 (0%)

Query  1    MNSKPVIGISGCLTGSVIRFDGGHKRMRFVMDELSPWVAFQPVCPEMAIGLPVPRPALRL  60
            MN+KPV+GISGCLTG+ +RFDGGHKRM FVM+ L+PWVA++P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IQTANGDIRMRMSHAPQQDMTEKMNAFAADYLPDVGRLAGFIVCAKSPSCGLERVRLYDE  120
            IQT+ GDIRMR SHAP++D+TE+MNAFA  +LP +G LAGFIVCAKSPSCG+ERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  QGNRGRKEGVGLFTAALLKTYPWLPVEEDGRLHDPVLRENFVERLFALHELNTLRDNGLT  180
            +GNRGRK G GLFTAA++  YPWLP+EEDGRLHDPVLRENF+ R+FALHELN+LR +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRTLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLEAFFIAYRHKLMAILRQPASR  240
            R++LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDL+AFF+ YR+KLMAILR+PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRKQLNNRQRAELRAVIIGYRAGRLPILAPLTLLKHYLAEHPDEYLL  300
            KNHTNVLMHIQGYF++ LN+RQRAELR VI+GYRAGRLPILAPLTLLKHYLAEHPD+YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPEVLGLRLAVA  319
            +QNYF+PYP+ LGLRLA++
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

44) ybgA in NC_016514


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  460 bits (1734),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 245/319 (77%), Positives = 286/319 (90%), Gaps = 0/319 (0%)

Query  1    MTMKPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVNFRPVCPEMAIGLPTPRPALRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV ++P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IVTDSGETQIRFSHAPHEDVTQKMADFTADYLPKIGDLAGFIVCAKSPSCGMERVRLYDE  120
            I T  G+ ++R+SHAPH+DVT++M  F+  +LP IG+LAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTATLLETLPWLPVEEDGRLHDPVLRENFVERVFALHELNTLRAQGLT  180
            +GNRGRK G GLFTA++++  PWLP+EEDGRLHDPVLRENF+ R+FALHELN+LRAQGL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVATLHEWDDLDAFFVAYREKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEWDDLDAFFV YREKLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRGELRDVILHYRNGQLPILAPITLLKHYLAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LNSRQR+ELR+VIL YR G+LPILAP+TLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAVK  319
            +QNYF+PYPD LGLRLA+ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

45) A3UG_00435 in NC_018079


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  457 bits (1720),  Expect = 6e-130, Method: Compositional matrix adjust.
 Identities = 246/319 (78%), Positives = 285/319 (90%), Gaps = 0/319 (0%)

Query  1    MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVNFRPVCPEMAIGLPTPRPALRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV ++P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IMTTGGDTQMRFSHPPHDDVTQKMADFTASYLPEIGDLAGFIVCAKSPSCGMERVRVYDE  120
            I TT GD +MR+SH+PHDDVT++M  F+  +LP IG+LAGFIVCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTAALLETWPWLPVEEDGRLHDPVLRENFVERVFALHELNTLRASGLT  180
            +GNRGRK G GLFTAA+++  PWLP+EEDGRLHDPVLRENF+ R+FALHELN+LRA GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFVAYREKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DLDAFFV YREKLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRGELRDVILHYRDGLLPILAPITLLKHYLAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LNSRQR+ELR+VIL YR G LPILAP+TLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAVK  319
            +QNYF+PYPD LGLRLA+ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

46) ECENHK_00520 in NC_018405


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  455 bits (1715),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 239/319 (75%), Positives = 285/319 (90%), Gaps = 0/319 (0%)

Query  1    MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVNFRPVCPEMAIGLPTPRPAIRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV ++P+CPE+AIGLP PRPA+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TLTDSGETQLRFSKPPHDDLTQKMANFTADYLPKIGDLSGFIVCAKSPSCGLERVRLYDE  120
              T  G+ ++R+S +PHDD+T++M  F+  +LP IG+L+GFIVCAKSPSCG+ERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTAALLETYPWLPVEEDGRLHDPVLRENFIERVFALHELNTLRAKGLT  180
            +GNRGRK G GLFTAA+++ YPWLP+EEDGRLHDPVLRENFI R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRGLLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFVAYREKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DLDAFFV YREKLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNTRQRGELRDVILHYRNGQLPILAPITLLKHYLAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LN+RQR+ELR+VIL YR G+LPILAP+TLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAVK  319
            +QNYF+PYPD LGLRLA+ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

47) H650_01395 in NC_021500


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  455 bits (1713),  Expect = 2e-129, Method: Compositional matrix adjust.
 Identities = 245/318 (78%), Positives = 285/318 (90%), Gaps = 0/318 (0%)

Query  1    MKTPPMIGISGCLTGSTVRFDGGHKRMGFVMDELARWVTFKPVCPEMGIGLPVPRPALRL  60
            M+  P++GISGCLTG+TVRFDGGHKRM+FVM+ LA WV++KP+CPE++IGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTTAGDIRMRFSHAPHDDVTEKMAEFAEAYLARQEGLAGFIVCAKSPSCGMERVRLYDE  120
            +QTT GDIRMR+SHAPHDDVTE+M  FA+ +L+    LAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGQRGRKEGVGLFTAALLAKYPWLPVEEDGRLHDPLLRENFVERVFALHELNTLRANGLT  180
            +G+RGRK G GLFTAA++ KYPWLP+EEDGRLHDP+LRENF+ R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLEFHSRYKLQLLAHHQAGYRQIGPFVASLHEWEDLDAFFRVYREKLMAILKKNASR  240
            RH+LL FHSRYKLQLLAHHQAGYR+IGPFVA LHEW+DLDAFF  YREKLMAIL+  ASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  ENHTNVLMHIQGYFREHLNSRQRGELRDVILNYRNGRLPILAPITLLKHYLAEYPDGYLA  300
             NHTNVLMHIQGYF+  LNSRQR+ELR+VIL YR GRLPILAP+TLLKHYLAE PD+YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  KQRYFTPYPDDLALRLTV  318
             Q YF PYPD L+LRL++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

48) KPK_4919 in NC_011283


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  449 bits (1690),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 254/319 (80%), Positives = 294/319 (93%), Gaps = 0/319 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPIGEIRMRFSHAPHEDVTEKMADFASAHLATLGELSGFIVCAKSPSCGMERVRLYDE  120
            +QT  G+IRMR+SHAPH+DVTE+M  FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT  180
            KGNRGRK G GLFT+A+M +YPWLP+EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKQPASR  240
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTVN  319
            +QNYF+PYP+ L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

49) KP1_0672 in NC_012731


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  449 bits (1691),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 254/319 (80%), Positives = 294/319 (93%), Gaps = 0/319 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPVGEIRMRFSHAPHEDVTEKMADFASAHLATLGELSGFIVCAKSPSCGMERVRLYDE  120
            +QT  G+IRMR+SHAPH+DVTE+M  FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT  180
            KGNRGRK G GLFT+A+M +YPWLP+EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKQPASR  240
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTVN  319
            +QNYF+PYP+ L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

50) Kvar_4552 in NC_013850


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  449 bits (1691),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 254/319 (80%), Positives = 294/319 (93%), Gaps = 0/319 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPVGEIRMRFSHAPHEDVTEKMADFASAHLATLGELSGFIVCAKSPSCGMERVRLYDE  120
            +QT  G+IRMR+SHAPH+DVTE+M  FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT  180
            KGNRGRK G GLFT+A+M +YPWLP+EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKQPASR  240
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTVN  319
            +QNYF+PYP+ L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

51) KPN2242_01750 in NC_017540


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  448 bits (1687),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 254/319 (80%), Positives = 294/319 (93%), Gaps = 0/319 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPVGEIRMRFSHAPHEDVTEKMADFASAHLATLGELSGFIVCAKSPSCGMERVRLYDE  120
            +QT  G+IRMR+SHAPH+DVTE+M  FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT  180
            KGNRGRK G GLFT+A+M +YPWLP+EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKRPASR  240
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTVN  319
            +QNYF+PYP+ L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

52) KPN_04726 in NC_009648


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  448 bits (1686),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 253/319 (80%), Positives = 293/319 (92%), Gaps = 0/319 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPVGEIRMRFSHAPHEDVTEKMADFASAHLATLGGLSGFIVCAKSPSCGMERVRLYDE  120
            +QT  G+IRMR+SHAPH+DVTE+M  FA   L+T+G L+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT  180
            KGNRGRK G GLFT+A+M +YPWLP+EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKQPASR  240
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTVN  319
            +QNYF+PYP+ L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

53) ybgA in NC_021232


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  447 bits (1685),  Expect = 3e-127, Method: Compositional matrix adjust.
 Identities = 253/319 (80%), Positives = 293/319 (92%), Gaps = 0/319 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPVGEIRMRFSHAPHEDVTEKMADFASAHLATLGELSGFIVCAKSPSCGMERVRLYDE  120
            +QT  G+IRMR+SHAPH+DVTE+M  FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLT  180
            KGNRGRK G GLFT+A+M +YPWLP+EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEDFFEVYREKLMAILKRPASR  240
            RH+LLAFHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+ FF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTVN  319
            +QNYF+PYP+ L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

54) KOX_18895 in NC_016612


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  447 bits (1683),  Expect = 5e-127, Method: Compositional matrix adjust.
 Identities = 252/318 (80%), Positives = 294/318 (93%), Gaps = 0/318 (0%)

Query  1    MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTTEGEIRMRFTHAPHDDVTEKMADFASAHLSTLGELSGFIVCAKSPSCGMERVRLYDE  120
            +QTT G+IRMR++HAPHDDVTE+M  FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGTGLFTAALMEKYPWLPVEEDGRLHDPVLRENFVERVFALHELNCLHKNGLT  180
            KGNRGRK GTGLFTAA+M+KYPWLP+EEDGRLHDPVLRENF+ R+FALHELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWQDLEAFFAIYREKLMTILKQPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLM+IL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRGELREVILNYRSGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YR+G LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  AQNYFDPYPQDLALRLTV  318
            +QNYF+PYP+ L+LRL++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

55) ROD_37331 in NC_013716


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  445 bits (1678),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 255/319 (80%), Positives = 289/319 (91%), Gaps = 0/319 (0%)

Query  1    MNVQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVTFKPVCPEMAIGLPVPRPALRL  60
            MN +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV++KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTPEGDTRMRFSHAPHDDVTEKMTAFADTFLPRQGNLAGFIVCAKSPSCGMERVRLYDE  120
            +QT  GD RMR+SHAPHDDVTE+M AFAD FLP  G+LAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTGALMASYPWLPVEEDGRLHDPALRENFVERVFALHELNTLRENGLT  180
            KGNRGRK G GLFT+A+M  YPWLP+EEDGRLHDP LRENF+ R+FALHELN+LR +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFIAYREKLMAILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DLDAFF+ YREKLMAIL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRGELREVILNYRAGllpilapltllKHYLAEYPDRYLL  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAPLTLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPHDLALRLAVN  319
            +QNYF+PYP+ L+LRLA+ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

56) RORB6_05710 in NC_021066


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  445 bits (1677),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 238/316 (76%), Positives = 281/316 (89%), Gaps = 0/316 (0%)

Query  1    MNTQPAVGISACLTGSAVRFDGGHKRMGFVMDELADWVAFKPVCPEMAIGLPAPRPALRL  60
            MN +P VGIS+CLTG++VRFDGGHKRM+FVM+ LA WVA+KP+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTNEGAIEMRFSQTPHDDVTEKMAEFSASFLPRVDALSGFVVCAKSPSCGMERVRLYDE  120
            +QT  G I MR+S++PHDDVTE+M  F+  FLP ++ L+GF+VCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGHRGRKEGVGLFTQQLLMHYPWLPVEEDGRLHDPVLRENFVERVFALHQLTTLRAQGLS  180
            +G+RGRK G GLFT  ++  YPWLP+EEDGRLHDPVLRENF+ R+FALH+L +LRAQGLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSQYKLQLLAHDQAGYREIGPFVASLHQWEDLDAFFVAYRAKLMAILKQPASR  240
            R++LL FHS+YKLQLLAH+QAGYREIGPFVA LH+W+DLDAFFV YR KLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDRLNSRQRGELREVILNYRAGLLPILAPMTLLKHYLGEFPDRYLL  300
            KNHTNVLMHIQGYF+  LNSRQR+ELREVIL YRAG LPILAP+TLLKHYL+E PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFNPYPQDLGLRL  316
            +QNYF+PYP+ LGLRL
Sbjct  301  SQNYFEPYPDTLGLRL  316

57) PCC21_014980 in NC_018525


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  441 bits (1661),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 244/318 (77%), Positives = 289/318 (91%), Gaps = 0/318 (0%)

Query  1    MTIQPVIGISGCLTGSAVRFDGGHKRMNFVMDELAQWVTFKPVCPEMSIGLPVPRPALRL  60
            M  +PV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV++KP+CPE++IGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQTAEGDIRMRFSHAPHDDVTEKMADFAETYLSRLEQLSGFIVCAKSPSCGMERVRLYDG  120
            +QT+ GDIRMR+SHAPHDDVTE+M  FA+ +L+ + +L+GFIVCAKSPSCGMERVRLYD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGVGLFTASLLEKYPWLPVEEDGRLHDPVLRENFVERVFALHELNTLRANGLT  180
            KGNRGRK G GLFTA++++KYPWLP+EEDGRLHDPVLRENF+ R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWENLDDFFVAYREKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW++LD FFV YREKLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLTLRQRGELREVILHYRDGllpilapltllKHYLAEYPDRYLL  300
            KNHTNVLMHIQGYF+  L  RQR+ELREVIL YR G LPILAPLTLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPQSLGLRLPV  318
            +QNYF+PYP++LGLRL++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

58) ENC_03080 in NC_021046


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  440 bits (1658),  Expect = 5e-125, Method: Compositional matrix adjust.
 Identities = 247/319 (78%), Positives = 286/319 (90%), Gaps = 0/319 (0%)

Query  1    MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFRPVCPEMAIGLPTPRPALRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WVA++P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VMTTGGETEMRFSKAPHDDVTQKMAAFTADYLPKIGDLAGFIVCAKSPSCGMERVRLYDE  120
            + TT G+  MR+S APHDDVT++M AF+  +LP IG+LAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTAALLETFPWLPVEEDGRLHDPVLRENFVERVFALHELNVMRKNGLT  180
            +GNRGRK G GLFTAA+++ +PWLP+EEDGRLHDPVLRENF+ R+FALHELN +R +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWDDLDAFFVTYRDKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEWDDLDAFFV YR+KLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRGELRDVILHYRDGllpilapltllKHYLAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LNSRQR+ELR+VIL YR G LPILAPLTLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAVT  319
            +QNYF+PYPD LGLRLA+T
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

59) Ent638_0062 in NC_009436


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  438 bits (1651),  Expect = 2e-124, Method: Compositional matrix adjust.
 Identities = 253/319 (80%), Positives = 294/319 (93%), Gaps = 0/319 (0%)

Query  1    MNNQPVLGISGCLTGSAVRFDGGHKRMGFVMDALAKEVTFKPVCPEMAIGLPVPRPALRL  60
            MNN+PV+GISGCLTG++VRFDGGHKRM+FVM++LA  V++KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKTPVGDIRMRFTHAPHDDVTDKMADFAAQYLPSIANLDGFIVCAKSPSCGMERVRIYDE  120
            ++T  GDIRMR++HAPHDDVT++M  FA ++LP+I++L GFIVCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  AGNRGAKEGSGTFTAAMMARYPWLPVEEDGRLHDPVLRENFIARVFALHELNAVRASGLT  180
             GNRG K G+G FTAAMM +YPWLP+EEDGRLHDPVLRENFIAR+FALHELNA+RA GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLAYHSRYKLQLLAHNQAGYREIGPFVASMHEWKDLDAFFEAYREKLMAILKQPASR  240
            R++LLA+HSRYKLQLLAH+QAGYREIGPFVA +HEW DLDAFF  YREKLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRDQLNARQRLELREVILHYRAGllpilapltllKHYLAEHPDDYLL  300
            KNHTNVLMHIQGYF+  LN+RQR ELREVIL YRAG LPILAPLTLLKHYLAEHPDDYL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFNPYPDELGLRLAIA  319
            +QNYF+PYPD LGLRLAI+
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

60) ybgA in NC_006856


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  437 bits (1646),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 241/319 (76%), Positives = 284/319 (90%), Gaps = 0/319 (0%)

Query  1    MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVSFRPVCPEMAIGLPTPRPAIRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV+++P+CPE+AIGLP PRPA+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TLTDSGETQLRFSKPPHDDITQKMADFTADYLPKIGDLSGFIVCAKSPSCGMERVRLYDE  120
              T  G+ ++R+S +PHDD+T++M  F+  +LP IG+L+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTAALLETYPWLPVEEDGRLHAPVLRENFIERVFALHELNTLRAKGLT  180
            +GNRGRK G GLFTAA+++ YPWLP+EEDGRLH PVLRENFI R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFVAYREKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DLDAFFV YREKLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRVELRDVILHYRDGllpilapltllKHYMAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LNSRQR ELR+VIL YR G LPILAPLTLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAVT  319
            +QNYF+PYPD LGLRLA+T
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

61) SeSA_B0012 in NC_011092


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  437 bits (1646),  Expect = 4e-124, Method: Compositional matrix adjust.
 Identities = 241/319 (76%), Positives = 284/319 (90%), Gaps = 0/319 (0%)

Query  1    MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVSFRPVCPEMAIGLPTPRPAIRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV+++P+CPE+AIGLP PRPA+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TLTDSGETQLRFSKPPHDDITQKMADFTADYLPKIGDLSGFIVCAKSPSCGMERVRLYDE  120
              T  G+ ++R+S +PHDD+T++M  F+  +LP IG+L+GFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTAALLETYPWLPVEEDGRLHAPVLRENFIERVFALHELNTLRAKGLT  180
            +GNRGRK G GLFTAA+++ YPWLP+EEDGRLH PVLRENFI R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFVAYREKLMTILKKPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DLDAFFV YREKLM+IL+ PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRVELRDVILHYRDGllpilapltllKHYMAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LNSRQR ELR+VIL YR G LPILAPLTLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAVT  319
            +QNYF+PYPD LGLRLA+T
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

62) Entas_0076 in NC_015968


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  433 bits (1629),  Expect = 9e-123, Method: Compositional matrix adjust.
 Identities = 241/319 (76%), Positives = 286/319 (90%), Gaps = 0/319 (0%)

Query  1    MTTKPVLGISGCLTGSAVRFDGGHKRMGFVMDELAQWVSFRPVCPEMAIGLPTPRPAIRL  60
            M  KPV+GISGCLTG++VRFDGGHKRM+FVM+ LA WV+++P+CPE+AIGLP PRPA+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TLTDSGDTQLRFSKPPHENLTQKMADFTADYLPKIDDLAGFIVCAKSPSCGMERVRLYDE  120
              T  GD ++R+S +PH+++T++M  F+  +LP I++LAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKEGVGLFTAALLETRPWLPVEEDGRLHDPVLRENFIERVFALHELNTLRANGLT  180
            +GNRGRK G GLFTAA+++  PWLP+EEDGRLHDPVLRENFI R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRTLLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLDAFFVAYRDKLMAILKQPASR  240
            R++LL FHSRYKLQLLAHHQAGYREIGPFVA LHEW+DLDAFFV YR+KLMAIL++PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRNQLNSRQRGELRDVILHYRDGllpilapltllKHYMAEYPDRYLM  300
            KNHTNVLMHIQGYF+  LNSRQR+ELR+VIL YR G LPILAPLTLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDDLGLRLAIT  319
            +QNYF+PYPD LGLRLAIT
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

63) ST548_p6470 in NC_020181


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  432 bits (1625),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 241/319 (76%), Positives = 289/319 (91%), Gaps = 0/319 (0%)

Query  1    MNKQPVIGISGCLTGSSVRFDGGHKRLPFAMDELAPWVTFKPICPEMAIGLSSPRPALRL  60
            MN++PV+GISGCLTG++VRFDGGHKR+ F M+ LAPWV++KPICPE+AIGL+ PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VRTDEGEIQMRFSSEPHDDVTGKMADFTAGYLPGLGELAGFIVCAKSPSCGMERVRLYDE  120
            ++T  G+I+MR+S  PHDDVT +M  F+  +LP +GELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGTGLFTHALMEAYPWLPVEEDGRLHDPQLRENFVERLFALHELNTLRANGLT  180
            KGNRGRK GTGLFT A+M+ YPWLP+EEDGRLHDP LRENF+ R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALMDFHSRYKLQLLAHHQAGYREIGPFVASMHQWQDLDAFFVAYRDKLMAILKNTASR  240
            R++L+ FHSRYKLQLLAHHQAGYREIGPFVA +H+W+DLDAFFV YR+KLMAIL++ ASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRERLNSRQRGELRDVILHYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELR+VIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPQALALRLGVN  319
            +QNYF+PYP++L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

64) EAE_16605 in NC_015663


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  432 bits (1625),  Expect = 2e-122, Method: Compositional matrix adjust.
 Identities = 241/319 (76%), Positives = 289/319 (91%), Gaps = 0/319 (0%)

Query  1    MNKQPVIGISGCLTGSSVRFDGGHKRLPFAMDELAPWVTFKPICPEMAIGLSSPRPALRL  60
            MN++PV+GISGCLTG++VRFDGGHKR+ F M+ LAPWV++KPICPE+AIGL+ PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VRTDEGEIQMRFSSEPHDDVTGKMADFTAGYLPGLGELAGFIVCAKSPSCGMERVRLYDE  120
            ++T  G+I+MR+S  PHDDVT +M  F+  +LP +GELAGFIVCAKSPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KGNRGRKEGTGLFTHALMEAYPWLPVEEDGRLHDPQLRENFVERLFALHELNTLRANGLT  180
            KGNRGRK GTGLFT A+M+ YPWLP+EEDGRLHDP LRENF+ R+FALHELN+LRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRALMDFHSRYKLQLLAHHQAGYREIGPFVASMHQWQDLDAFFVAYRDKLMAILKNTASR  240
            R++L+ FHSRYKLQLLAHHQAGYREIGPFVA +H+W+DLDAFFV YR+KLMAIL++ ASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFRERLNSRQRGELRDVILHYRAGllpilapltllKHYLAEYPDRYLQ  300
            KNHTNVLMHIQGYF+  LNSRQR+ELR+VIL YRAG LPILAPLTLLKHYLAE PD YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPQALALRLGVN  319
            +QNYF+PYP++L+LRL++ 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

65) ECL_00084 in NC_014121


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  417 bits (1568),  Expect = 5e-118, Method: Compositional matrix adjust.
 Identities = 225/293 (77%), Positives = 261/293 (90%), Gaps = 0/293 (0%)

Query  1    MDFVMDELAQWVNFRPVCPEMAIGLPTPRPALRLIMTTGGDTQMRFSHPPHDDVTQKMAD  60
            MDFVM+ LA WV ++P+CPE+AIGLP PRPALRLI TT GD +MR+SH+PHDDVT++M  
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FTASYLPKIGDLAGFIVCAKSPSCGMERVRVYDENGNRGRKEGVGLFTAALLETWPWLPV  120
            F+  +LP IG+LAGFIVCAKSPSCGMERVR+YDE+GNRGRK G GLFTAA+++  PWLP+
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPVLRENFVERVFALHELNTLRKNGLTRRALLDFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDPVLRENF+ R+FALHELN+LR +GL+R++LL FHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVASLHEWDDLDAFFEAYREKLMTILKKPASRKNHTNVLMHIQGYFRNQLNSRQRGEL  240
            GPFVA LHEWDDLDAFF  YREKLM+IL+ PASRKNHTNVLMHIQGYF+  LNSRQR+EL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  RDVILHYREGLLPILAPITLLKHYLAEYPDQYLMTQNYFDPYPDDLGLRLAVK  293
            R+VIL YR G LPILAP+TLLKHYLAE PD+YL +QNYF+PYPD LGLRLA+ 
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

66) KPHS_05690 in NC_016845


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  409 bits (1538),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 234/293 (80%), Positives = 269/293 (92%), Gaps = 0/293 (0%)

Query  1    MGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRLVQTPVGEIRMRFSHAPHEDVTEKMAD  60
            M+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL+QT  G+IRMR+SHAPH+DVTE+M  
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FASAHLATLGELSGFIVCAKSPSCGMERVRLYDEKGNRGRKEGVGLFTGALMARYPWLPV  120
            FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDEKGNRGRK G GLFT+A+M +YPWLP+
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPLLRENFVERVFALHELNALRARGLTRHSLLAFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+RHSLLAFHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVASLHEWEDLEAFFEVYREKLMAILKQPASRKNHTNVLMHIQGYFRDQLNSRQRGEL  240
            GPFVA LHEW+DL+AFF  YREKLMAIL++PASRKNHTNVLMHIQGYF+  LNSRQR+EL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  REVILNYRAGllpilapltllKHYLAEYPDRYLQAQNYFDPYPQDLALRLTVN  293
            REVIL YRAG LPILAPLTLLKHYLAE PD YL++QNYF+PYP+ L+LRL++ 
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

67) N559_4576 in NC_022082


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  409 bits (1538),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 234/293 (80%), Positives = 269/293 (92%), Gaps = 0/293 (0%)

Query  1    MGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRLVQTPVGEIRMRFSHAPHEDVTEKMAD  60
            M+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL+QT  G+IRMR+SHAPH+DVTE+M  
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FASAHLATLGELSGFIVCAKSPSCGMERVRLYDEKGNRGRKEGVGLFTGALMARYPWLPV  120
            FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDEKGNRGRK G GLFT+A+M +YPWLP+
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPLLRENFVERVFALHELNALRARGLTRHSLLAFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+RHSLLAFHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVASLHEWEDLEAFFEVYREKLMAILKQPASRKNHTNVLMHIQGYFRDQLNSRQRGEL  240
            GPFVA LHEW+DL+AFF  YREKLMAIL++PASRKNHTNVLMHIQGYF+  LNSRQR+EL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  REVILNYRAGllpilapltllKHYLAEYPDRYLQAQNYFDPYPQDLALRLTVN  293
            REVIL YRAG LPILAPLTLLKHYLAE PD YL++QNYF+PYP+ L+LRL++ 
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

68) A79E_4432 in NC_018522


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  408 bits (1537),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 233/293 (80%), Positives = 269/293 (92%), Gaps = 0/293 (0%)

Query  1    MGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRLVQTPVGEIRMRFSHAPHEDVTEKMAD  60
            M+FVM+ LA WVA+KP+CPE+AIGLPVPRPALRL+QT  G+IRMR+SHAPH+DVTE+M  
Sbjct  27   MDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDVTERMNA  86

Query  61   FASAHLATLGELSGFIVCAKSPSCGMERVRLYDEKGNRGRKEGVGLFTGALMARYPWLPV  120
            FA   L+T+GEL+GFIVCAKSPSCGMERVRLYDEKGNRGRK G GLFT+A+M +YPWLP+
Sbjct  87   FADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPI  146

Query  121  EEDGRLHDPLLRENFVERVFALHELNALRARGLTRHGLLAFHSRYKLQLLAHHQAGYREI  180
            EEDGRLHDP+LRENF+ R+FALHELNALRA+GL+RH+LLAFHSRYKLQLLAHHQAGYREI
Sbjct  147  EEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREI  206

Query  181  GPFVASLHEWEDLEAFFEVYREKLMAILKQPASRKNHTNVLMHIQGYFRDQLNSRQRGEL  240
            GPFVA LHEW+DL+AFF  YREKLMAIL++PASRKNHTNVLMHIQGYF+  LNSRQR+EL
Sbjct  207  GPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAEL  266

Query  241  REVILNYRAGllpilapltllKHYLAEYPDRYLQAQNYFDPYPQDLALRLTVN  293
            REVIL YRAG LPILAPLTLLKHYLAE PD YL++QNYF+PYP+ L+LRL++ 
Sbjct  267  REVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

69) CE10_0522 in NC_017646


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  406 bits (1526),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 219/319 (69%), Positives = 277/319 (87%), Gaps = 0/319 (0%)

Query  1    MIKKPVIGISGCLAGSAVRFDGGHKRADFLMDKLVEWVTFRPVCPEMAIGLPVPRPALRL  60
            M +KPV+GISGCL+G++VRFDGGHKR DF+M+ L  WV+++P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VRSTQGNIRMCFSHDQNEDVTERMTEFSRSYMDKLKDVSGFVVCAKSPSCGMERVRVYDE  120
            +++T G+IRM +SH  ++DVTERM  F+  ++  + +++GF+VCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKDGVGLFTSTLMEKFSWLPVEEDGRLHDPVLRENFVERVFALHELNHLYKEKLS  180
            +GNRGRK G GLFT+++M+K++WLP+EEDGRLHDPVLRENF+ R+FALHELN L  + LS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRELLAFHSRYKLQLLAHSQAGYKDMGPFVAAIHEWADLESYFEVYRDKLMAILRKPASR  240
            R+ LLAFHSRYKLQLLAH QAGY+++GPFVA +HEW DL+++F  YR+KLMAILR PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFSNYLSTRQRKELSEVILNYRSGtlpllapltllKHYLGEYPNDYLL  300
            KNHTNVLMHIQGYF   L++RQR EL EVIL YR+G LP+LAPLTLLKHYL+E P+DYL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDELALRLMVN  319
            +QNYF+PYPD L+LRL + 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

70) EFER_2704 in NC_011740


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  406 bits (1526),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 219/319 (69%), Positives = 277/319 (87%), Gaps = 0/319 (0%)

Query  1    MIKKPVIGISGCLAGSAVRFDGGHKRADFLMDKLVEWVTFRPVCPEMAIGLPVPRPALRL  60
            M +KPV+GISGCL+G++VRFDGGHKR DF+M+ L  WV+++P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VRSTQGNIRMCFSHDQNEDVTERMTEFSRSYMDKLKDVSGFVVCAKSPSCGMERVRVYDE  120
            +++T G+IRM +SH  ++DVTERM  F+  ++  + +++GF+VCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKDGVGLFTSTLMEKFSWLPVEEDGRLHDPVLRENFVERVFALHELNHLYKEKLS  180
            +GNRGRK G GLFT+++M+K++WLP+EEDGRLHDPVLRENF+ R+FALHELN L  + LS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRELLAFHSRYKLQLLAHSQAGYKDMGPFVAAIHEWADLESYFEVYRDKLMAILRKPASR  240
            R+ LLAFHSRYKLQLLAH QAGY+++GPFVA +HEW DL+++F  YR+KLMAILR PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFSNYLSTRQRKELSEVILNYRSGtlpllapltllKHYLGEYPNDYLL  300
            KNHTNVLMHIQGYF   L++RQR EL EVIL YR+G LP+LAPLTLLKHYL+E P+DYL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPDELALRLMVN  319
            +QNYF+PYPD L+LRL + 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

71) ECUMN_1408 in NC_011751


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  401 bits (1510),  Expect = 2e-113, Method: Compositional matrix adjust.
 Identities = 223/319 (70%), Positives = 274/319 (86%), Gaps = 0/319 (0%)

Query  1    MIKKPVVGISGCLAGSSVRFDGGHKRASFLMDKLLEWVTFKPVCPEMAIGLPVPRPALRL  60
            M +KPVVGISGCL+G++VRFDGGHKR  F+M+ L  WV++KP+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VRSAQGNIRMCFSHDQNEDVTEKMTEFSRSYLDKLKDVSGFVVCAKSPSCGMERVRVYDE  120
            ++++ G+IRM +SH  ++DVTE+M  F+  +L  + +++GF+VCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKDGVGLFTSTLMERFSWLPVEEDGRLHDPVLRENFVERVFALHELNHLYKAKLS  180
            +GNRGRK G GLFT+++M++++WLP+EEDGRLHDPVLRENF+ R+FALHELN L    LS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRELLAFHSRYKLQLLAHSQAGYKEMGPFVAAIHEWADLESYFEVYREKLMAILRKPASR  240
            R+ LLAFHSRYKLQLLAH QAGY+E+GPFVA +HEW DL+++F  YREKLMAILR PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFSNCLNTRQRKELSDVILNYRAGtlpllapltllKHYLAEYPDDYLL  300
            KNHTNVLMHIQGYF   LN+RQR EL +VIL YRAG LP+LAPLTLLKHYLAE PDDYL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  IQNYFHPYPDELALRLLVN  319
             QNYF+PYPD L+LRL + 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

72) EcHS_A1648 in NC_009800


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  400 bits (1504),  Expect = 6e-113, Method: Compositional matrix adjust.
 Identities = 217/319 (69%), Positives = 274/319 (86%), Gaps = 0/319 (0%)

Query  1    MIKKPVIGISGCLGGSAVRFDGGHKRDDFLMDKLVEWVTFRPVCPEMAIGLPVPRPALRL  60
            M +KPV+GISGCL G++VRFDGGHKR DF+M+ L  WV+++P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VRSKQGNIRMCFSHDQNEDVTERMTEFSRSYMDKLKDVSGFVVCAKSPSCGMERVRVYDE  120
            +++  G+IRM +SH  ++DVTERM  F+  ++  + +++GF+VCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGNRGRKDGVGLFTSTLMEKFSWLPVEEDGRLHDPVLRENFIERVFALHELNHLYKEKLS  180
            +GNRGRK G GLFT+++M+K++WLP+EEDGRLHDPVLRENFI R+FALHELN L  + LS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RRELLAFHSRYKLQLLAHSQAGYKDMGPFVAAIHEWADLESYFEVYRDNLMAILRKPASR  240
            R+ LLAFHSRYKLQLLAH QAGY+++GPFVA +HEW DL+++F  YR++LMAILR PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  KNHTNVLMHIQGYFSNYLSTRQRKELSEVILNYRFGtlpllapltllKHYLGEYPNDYLL  300
            KNHTNVLMHIQGYF   L++RQR EL EVIL YR G LP+LAPLTLLKHYL+E P+DYL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQNYFDPYPEELALRLMVN  319
            +QNYF+PYP+ L+LRL + 
Sbjct  301  SQNYFEPYPDTLGLRLAIT  319

73) D782_3150 in NC_020063


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  372 bits (1397),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 189/315 (60%), Positives = 257/315 (82%), Gaps = 0/315 (0%)

Query  1    MQKKIPVGISACLLGEPVRFDGGHKRLPFAVEELSPWVRFEPVCPEMAIGLPVPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR+ F ++ L+PWV + P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKVAEDEVALRFSDGREGDLTQAMREFSAQRIAPFETLCGYIVCAKSPSCGMERVRIYEA  120
            ++ + +++ +R+S++ ++D+T+ M  F+ + ++ +  L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DGKNNRKAGRGIYTEALMARFPWLPVEEDGRLHDPVLRENFVERIYALHELNSLREEGLT  180
             G+  RKAG G++T A+M ++PWLP+EEDGRLHDPVLRENF+ RI+ALHELN+LR +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGKLIAYHSRYKLSLLAHSQPDYRELGRFVATLHEWESLDAWFIAYRQRLMNLLSIPATR  240
            R  L+A+HSRYKL LLAH Q++YRE+G FVA LHEW+ LDA F+ YR++LM +L  PA+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRKQLNSRQRQELSTLIEGYRLATQPLLAPVTLLKHYMAEFPDTYLA  300
            +NHTNVLMH+QGYF++ LNSRQR EL  +I GYR +  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  TQRYFDPWPEALRLR  315
            +Q YF+P P++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

74) Entcl_3117 in NC_014618


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  360 bits (1353),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 185/315 (59%), Positives = 250/315 (80%), Gaps = 0/315 (0%)

Query  1    MSEKIPVGISACLLGEKVRFDGGHRRFPFAVEELSPWVAFEPVCPEMAIGLPVPRPALRL  60
            M++K  VGIS+CL G  VRFDGGH+R  F ++ L+PWVA+ P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKGESGEMELRFSDKREGELSSAMREFTHKRIARFEHLCGYIVCAKSPSCGMERVRVYDA  120
            ++   G++ +R+S+  +++++  M  F+++ ++ + +L G+IVCAKSPSCGMERVR+YD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  KSHNNRKSGRGIYTEILMQTYPWLPVEEDGRLHDPVLRENFVERIYALHELHVLRERGLT  180
            K++  RK+G G++T  +M+ YPWLP+EEDGRLHDPVLRENF+ RI+ALHEL+ LR +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGELVAFHSRYKLLLLAHSQPLYRELGRFVAAMSEWSSLADYFTEYRLRLMALMAHPATR  240
            R  L+AFHSRYKL LLAH Q+ YRE+G FVA + EW  L  +F  YR +LMA++ HPA+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRNQLNSRQRQELANLIDRYRQGTQPLLAPVTLLKHYMAEFPDAYLA  300
            +NHTNVLMH+QGYF+  LNSRQR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  GQRYFDPWPEALRLR  315
            +Q YF+P P++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

75) ESA_02639 in NC_009778


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  354 bits (1330),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 189/315 (60%), Positives = 252/315 (80%), Gaps = 1/315 (0%)

Query  1    MSIKIPVGISACLLGENVRFDGGHKRLAFAVEELAPWVKYEPVCPEMAVGLPVPRPALRL  60
            M+ K  VGIS+CL G  VRFDGGHKR+ F ++ LAPWV Y P+CPE+A+GLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKTD-DGLALRFSDKREGDLTAEMQTFSRERVSRLDHLCGYIVCAKSPSCGMERVRVYDA  119
            ++T  +++ +R+S+  ++D+T  M++F+   ++ +++L G+IVCAKSPSCGMERVR+YD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  DGKNNRKAGRGLYTEILMNALPWLPVEEDGRLHDPAIRENFVERIYTLHELHALRAEGLT  179
             G+  RKAG GL+T  +M+  PWLP+EEDGRLHDP +RENF+ RI++LHEL+ALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGNLIAFHSRYKLLLLAHSQPLYRELGRFVAAIDQWDSLEAFFEEYRLRLMTLLSIHATR  239
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA +++WD L+AFF  YR +LM++L   A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRNQLNGRQRQELSTLIDRYRQGTQPLLAPVTLLKHYMAEYPDAYLD  299
            +NHTNVLMH+QGYF+  LN+RQR EL  +I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  QQRYFEPYPEALRLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

76) Q7S_15965 in NC_017047


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  353 bits (1324),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 243/315 (78%), Gaps = 1/315 (0%)

Query  1    MTKTIPIGISACLLGENVRFDGGHKRLAFAVEQLAPYVRFEPICPEMAIGLPTPRPALRL  60
            M +   +GIS+CL G  VRFDGGHKR+ F ++ LAP V + PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMD-DSIVMRFSNDESIDVTEKMQSYAEKRVAPLTGLCGYIVCAKSPSCGMERVRVYSA  119
            ++   + I MR+S+    DVTE+M+++A++ ++ +  L G+IVCAKSPSCGMERVR+Y  
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NGKDAKKSGIGMYTAELMKQHPWLPVEEDGRLNDPVLRENFVERVFALFELNQLRESGLT  179
            +G+ ++K+G G++TA +M + PWLP+EEDGRL+DPVLRENF+ R+FAL ELN LR  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGKLMAFHSRYKLILLAHSQPEYRELGRFVAAMAEWDSLEDYFTEYRLRLMNLLLHKATR  239
            R  L+AFHSRYKL LLAH Q+ YRE+G FVA + EWD L+ +F  YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRKQLSSPQRQELAGLIDRYRQGMQPLLAPITLLKHYMSEYPDAYLA  299
            +NHTNVLMH+QGYF++ L+S QR EL  +I  YR G  P+LAP+TLLKHY++E PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  DQRYFEPYPEALKLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

77) Rahaq_3165 in NC_015061


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  353 bits (1324),  Expect = 1e-98, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 243/315 (78%), Gaps = 1/315 (0%)

Query  1    MTKTIPIGISACLLGENVRFDGGHKRLAFAVEQLAPYVRFEPICPEMAIGLPTPRPALRL  60
            M +   +GIS+CL G  VRFDGGHKR+ F ++ LAP V + PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMD-DSIVMRFSNDESIDVTEKMQSYAEKRVAPLTGLCGYIVCAKSPSCGMERVRVYSA  119
            ++   + I MR+S+    DVTE+M+++A++ ++ +  L G+IVCAKSPSCGMERVR+Y  
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NGKDAKKSGIGMYTAELMKQHPWLPVEEDGRLNDPVLRENFVERVFALFELNQLRESGLT  179
            +G+ ++K+G G++TA +M + PWLP+EEDGRL+DPVLRENF+ R+FAL ELN LR  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGKLMAFHSRYKLILLAHSQPEYRELGRFVAAMAEWDSLEDYFTEYRLRLMNLLLHKATR  239
            R  L+AFHSRYKL LLAH Q+ YRE+G FVA + EWD L+ +F  YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRKQLSSPQRQELAGLIDRYRQGMQPLLAPITLLKHYMSEYPDAYLA  299
            +NHTNVLMH+QGYF++ L+S QR EL  +I  YR G  P+LAP+TLLKHY++E PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  DQRYFEPYPEALKLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

78) ES15_2720 in NC_017933


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  353 bits (1326),  Expect = 7e-99, Method: Compositional matrix adjust.
 Identities = 188/315 (60%), Positives = 252/315 (80%), Gaps = 1/315 (0%)

Query  1    MSIKIPVGISACLLGENVRFDGGHKRLAFAVEELAPWVKYEPVCPEMAVGLPVPRPALRL  60
            M+ K  VGIS+CL G  VRFDGGHKR+ F ++ LAPWV Y P+CPE+A+GLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKTD-DGLALRFSDKREGDLTAEMQTFSRERVSRLDHLCGYIVCAKSPSCGMERVRVYDA  119
            ++T  +++ +R+S+  ++D+T  M++F+   ++ +++L G+IVCAKSPSCGMERVR+YD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  DGKNNRKAGRGIYTEILMNALPWLPVEEDGRLHDPAIRENFVERIYTLHELHALRAEGLT  179
             G+  RKAG G++T  +M+  PWLP+EEDGRLHDP +RENF+ RI++LHEL+ALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGNLIAFHSRYKLLLLAHSQPLYRELGRFVAAIDQWDSLEAFFDEYRLRLMTLLSIHATR  239
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA +++WD L+AFF  YR +LM++L   A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRNQLNGRQRQELSTLIDRYRQGTQPLLAPVTLLKHYMAEYPDAYLD  299
            +NHTNVLMH+QGYF+  LN+RQR EL  +I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  QQRYFEPYPEALRLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

79) CSSP291_12470 in NC_020260


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  353 bits (1326),  Expect = 7e-99, Method: Compositional matrix adjust.
 Identities = 188/315 (60%), Positives = 252/315 (80%), Gaps = 1/315 (0%)

Query  1    MSIKIPVGISACLLGENVRFDGGHKRLAFAVEELAPWVKYEPVCPEMAVGLPVPRPALRL  60
            M+ K  VGIS+CL G  VRFDGGHKR+ F ++ LAPWV Y P+CPE+A+GLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKTD-DGLALRFSDKREGDLTAEMQTFSRERVSRLDHLCGYIVCAKSPSCGMERVRVYDA  119
            ++T  +++ +R+S+  ++D+T  M++F+   ++ +++L G+IVCAKSPSCGMERVR+YD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  DGKNNRKAGRGIYTEILMNALPWLPVEEDGRLHDPAIRENFVERIYTLHELHALRAEGLT  179
             G+  RKAG G++T  +M+  PWLP+EEDGRLHDP +RENF+ RI++LHEL+ALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGNLIAFHSRYKLLLLAHSQPLYRELGRFVAAIDQWDSLEAFFDEYRLRLMTLLSIHATR  239
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA +++WD L+AFF  YR +LM++L   A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRNQLNGRQRQELSTLIDRYRQGTQPLLAPVTLLKHYMAEYPDAYLD  299
            +NHTNVLMH+QGYF+  LN+RQR EL  +I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  QQRYFEPYPEALRLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

80) Rahaq2_3195 in NC_016818


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  353 bits (1326),  Expect = 7e-99, Method: Compositional matrix adjust.
 Identities = 186/315 (60%), Positives = 242/315 (77%), Gaps = 1/315 (0%)

Query  1    MTKTIPIGISACLMGENVRFDGGHKRLAFAVEQLAPYVRFEPICPEMAIGLPTPRPALRL  60
            M +   +GIS+CL G  VRFDGGHKR+ F ++ LAP V + PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMD-DSIVMRFSNDESVDVTEKMQQYAEKRVAPLTGLCGYIVCAKSPSCGMERVRVYSA  119
            ++   + I MR+S+    DVTE+M+ +A++ ++ +  L G+IVCAKSPSCGMERVR+Y  
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NGKDAKKSGIGIYTAELMKQHPWLPVEEDGRLNDPVLRENFVERVFALFELNQLRESGLT  179
            +G+ ++K+G G++TA +M + PWLP+EEDGRL+DPVLRENF+ R+FAL ELN LR  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGKLMAFHSRYKLILLAHSQPEYRELGRFVAAMAEWDSLDNYFDEYRLRLMNLLSHKATR  239
            R  L+AFHSRYKL LLAH Q+ YRE+G FVA + EWD LD +F  YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRKQLSSPQRQELAGLIDRYRQGMQPLLAPITLLKHYLSEYPDAYLA  299
            +NHTNVLMH+QGYF++ L+S QR EL  +I  YR G  P+LAP+TLLKHYL+E PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  DQRYFEPYPEALKLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

81) CTU_13160 in NC_013282


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  350 bits (1314),  Expect = 7e-98, Method: Compositional matrix adjust.
 Identities = 188/315 (60%), Positives = 249/315 (80%), Gaps = 1/315 (0%)

Query  14   MTIKIPVGISACLLGENVRFDGGHKRLAFAVEELAPWVKYEPVCPEMAVGLPVPRPALRL  73
            M  K  VGIS+CL G  VRFDGGHKR+ F ++ LAPWV Y P+CPE+A+GLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  74   VKTD-EGLALRFSDKREGDLTGEMETFSRERVSRLDHLCGYIVCAKSPSCGMERVRVYDA  132
            ++T   ++ +R+S+  ++D+T  M++F+   ++ +++L G+IVCAKSPSCGMERVR+YD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  133  DGKNNRKAGRGIFTEILMNALPWLPVEEDGRLYDPGIRENFVERIYTLHELHALRAEGLT  192
             G+  RKAG G+FT  +M+  PWLP+EEDGRL DP +RENF+ RI++LHEL+ALRA+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  193  RGNLIAFHSRYKLLLLAHSQPLYRELGRFVAAIDQWDSLEAYFEEYRLRLMALLSIQATR  252
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA +++WD L+A+F  YR +LMA+L   A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  253  RNHTNVLMHVQGYFRNQLNGRQRQELSTLIDRYRQGTQPLLAPVTLLKHYMAEYPDPYLD  312
            +NHTNVLMH+QGYF+  LN+RQR EL  +I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  313  QQRYFEPYPEALRLR  327
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

82) PC1_1223 in NC_012917


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  345 bits (1297),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 188/309 (61%), Positives = 246/309 (80%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLEFAVEQLAPYFRFEPVCPEMAIGLPVPRPALRLVREGES  67
            VGIS+CL G  VRFDGGHKR++F ++ LAP   + P+CPE+AIGLPVPRPALRL++   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   HITLRASNGSPLDVTQQMAVFSADKVSQLQHLCGYIVCAKSPSCGMERVKIYDEAQKNAR  127
            +I +R S+++  DVT++M  F+   ++ + +L G+IVCAKSPSCGMERV++YDE  + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGIGLFTQELMRQMPWLPVEEDGRLHDPGLRENFIARVYALHELNQLWQDGLSRGALIA  187
            K+G GLFT  +M + PWLP+EEDGRLHDP LRENFIAR++ALHELN L+ +GLSR +L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPEYRELGPFVAGIDKWDSLEDYVVEYRKRLMKLLSTPATRRNHTNV  247
            FHSRYKL LLAH Q+ YRE+GPFVA ++ WD L+ + V YR +LM +L  PA+R+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLNSQQRQELSQLIDRYRQGFQPLLAPITLLKHYMAEYPDAYLAQQRYFE  307
            LMH+QGYF+R LNS+QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL  Q YFE
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

83) SerAS12_1224 in NC_015566


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  345 bits (1295),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 247/315 (79%), Gaps = 0/315 (0%)

Query  1    MSDKIPVGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFESVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F ++ LAP V + ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   SKQQHPSPAMRYSNDDSVDVTDKMQRFSEQRVAELGHLCGYIVCAKSPSCGMERVRVYSE  120
             +       MRYS+    DVT++M+ F+++ ++ +G+L G+IVCAKSPSCGMERVR+Y E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGKESRKNGVGLFTAELLRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLT  180
            +G+ +RK G GLFTA ++ + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGGLIAFHSRYKLSLLAHSQPEYRELGRFVADIEKWESLEAFAIEYRSRLMRLLAHKATR  240
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA ++ W+ L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSSAQRQELAQLIDRYRQGMQPLLAPITLLKHYMAEYPDRYLA  300
            +NHTNVLMH+QGYF+R L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  DQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

84) SerAS13_1224 in NC_017573


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  345 bits (1295),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 247/315 (79%), Gaps = 0/315 (0%)

Query  1    MSDKIPVGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFESVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F ++ LAP V + ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   SKQQHPSPAMRYSNDDSVDVTDKMQRFSEQRVAELGHLCGYIVCAKSPSCGMERVRVYSE  120
             +       MRYS+    DVT++M+ F+++ ++ +G+L G+IVCAKSPSCGMERVR+Y E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGKESRKNGVGLFTAELLRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLT  180
            +G+ +RK G GLFTA ++ + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGGLIAFHSRYKLSLLAHSQPEYRELGRFVADIEKWESLEAFAIEYRSRLMRLLAHKATR  240
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA ++ W+ L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSSAQRQELAQLIDRYRQGMQPLLAPITLLKHYMAEYPDRYLA  300
            +NHTNVLMH+QGYF+R L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  DQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

85) SerAS9_1224 in NC_015567


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  345 bits (1295),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 247/315 (79%), Gaps = 0/315 (0%)

Query  1    MSDKIPVGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFESVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F ++ LAP V + ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   SKQQHPSPAMRYSNDDSVDVTDKMQRFSEQRVAELGHLCGYIVCAKSPSCGMERVRVYSE  120
             +       MRYS+    DVT++M+ F+++ ++ +G+L G+IVCAKSPSCGMERVR+Y E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGKESRKNGVGLFTAELLRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLT  180
            +G+ +RK G GLFTA ++ + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGGLIAFHSRYKLSLLAHSQPEYRELGRFVADIEKWESLEAFAIEYRSRLMRLLAHKATR  240
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA ++ W+ L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSSAQRQELAQLIDRYRQGMQPLLAPITLLKHYMAEYPDRYLA  300
            +NHTNVLMH+QGYF+R L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  DQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

86) PCC21_012550 in NC_018525


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  344 bits (1293),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 186/309 (61%), Positives = 245/309 (80%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLTFAAEQLAPYFRFEPVCPEMAIGLPVPRPALRLVRKGES  67
            VGIS+CL G  VRFDGGHKR+ F  + LAP   + P+CPE+AIGLPVPRPALRL++   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   EITLRASNGSPLDVTQQMTAFSADKVSQLQHLCGYIVCAKSPSCGMERVKVYDEAQKDAR  127
            +I +R S+++  DVT++M AF+   ++ + +L G+IVCAKSPSCGMERV++YDE  + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGVGLFTQELMRQMPWLPVEEDGRLQDPGLRENFIERVYALHELNQLWQNGLSRGALIA  187
            K+G GLFT  +M + PWLP+EEDGRL+DP LRENFI R++ALHELN L+ +GLSR +L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPEYRELGPFVAGIDKWESLEDYIVEYRKRLMKLLSTPATRRNHTNV  247
            FHSRYKL LLAH Q+ YRE+GPFVA ++ W+ L+ ++V YR +LM +L  PA+R+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLNSQQRQELAQLIDRYRQGLQPLLAPITLLKHYMAEYPDAYLAQQRYFE  307
            LMH+QGYF+R LNS+QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL  Q YFE
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

87) SMWW4_v1c12150 in NC_020211


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  344 bits (1292),  Expect = 4e-96, Method: Compositional matrix adjust.
 Identities = 186/315 (60%), Positives = 250/315 (80%), Gaps = 0/315 (0%)

Query  1    MSDKIPIGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFEPVCPEMAIGLPTPRPALRL  60
            M++K  +GIS+CL G +VRFDGGHKR+ F ++ LAP V + P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKQAQPWPAMRYSNDAGVDLTEEMRSFSAQRVAALQHLCGYIVCAKSPSCGLERVRVYSE  120
            ++ +     MRYS+ +  D+TE M +F+ + ++++ +L G+IVCAKSPSCG+ERVR+Y E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGKDSRKNGVGLFTAELLRQMPWLPVEEDGRLQDAALRENFIERVYALYELNMLWRQGLT  180
            +G+ +RK G GLFTA ++ + PWLP+EEDGRL+D+ LRENFI R++AL ELN L+ QGL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGGLIAFHSRYKLSLLAHSQPAYRELGRFVADIHRWDSLEAFAVEYRSRLMALLAHKATR  240
            R +L+AFHSRYKL LLAH Q++YRE+G FVA +H WD L+AF V YR +LMA+L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSAAQRQELAHLIDRYRQGMQPLLAPIALLKHYMAEYPDSYLA  300
            +NHTNVLMH+QGYF+R L++ QR EL ++I  YR G  P+LAP++LLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  EQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

88) Dd586_1176 in NC_013592


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  343 bits (1289),  Expect = 7e-96, Method: Compositional matrix adjust.
 Identities = 185/309 (60%), Positives = 245/309 (80%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLAFAVEQLAPYFHFEPTCPEMAIGLPVPRPALRLVKSDAG  67
            VGIS+CL G  VRFDGGHKR+ F ++ LAP   + P CPE+AIGLPVPRPALRL+++  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   DIRLLASNGSGLDATEKMAAFSAARTAELAHLCGYIVCAKSPSCGMERVKVYEPAQNNAR  127
            DIR+  S+++  D TE+M AF+    + +++L G+IVCAKSPSCGMERV++Y+   N +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGVGLFTRQLQQTLPWLPVEEDGRLHDPMLRENFITRVYALHEFNQLWQSGLSRSALMS  187
            K+G GLFT  + +  PWLP+EEDGRLHDP+LRENFI+R++ALHE+N L+  GLSR +L++
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPAYRELGPFVAAIDQWDSLDAFAAQYRLRLMTLLSHPASRRNHTNV  247
            FHSRYKL LLAH Q++YRE+GPFVA +++WD LDAF  +YR +LM++L HPASR+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLTAGQRQELAQLIERYRQGVQPLLAPLTLLRHYMTEYPDAWLSQQRYFD  307
            LMH+QGYF+R L + QR EL ++I  YR G  P+LAPLTLL+HY++E PD  L  Q YF+
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

89) PMI0989 in NC_010554


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  343 bits (1288),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 172/317 (55%), Positives = 252/317 (80%), Gaps = 0/317 (0%)

Query  10   HKKIIVGISSCLLGDKVRFDGGHKCCHLAADELSEFFEYQSTCPEMAIGLPTPRPALRLV  69
            ++K +VGIS+CL G  VRFDGGHK  ++  + L+    Y++ CPE+AIGLP PRPALRL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  70   QSKTGEVRLKFSNGSEGDLTQLMNDYSIEYLRRFNQFSGYIVCAKSPSCGLERVRVYDPI  129
            Q+  G++R+++S+++++D+T+ MN ++  +L  + +++G+IVCAKSPSCG+ERVR+YD  
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  130  GNGNKKSGTGIFTENLKRIMPWLPIEEDGRLNDPYIRENFITRVFALNELNQLKINNFTR  189
            GN  +K+GTG+FT  +    PWLPIEEDGRL+DP +RENFI+R+FAL+ELN L+ + ++R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  190  QTLIDFHTRYKLLLLAHSQPLYRQLGRFVANNKDWDSLETFFVEYRNRFMALLQHQATRR  249
            ++L+ FH+RYKL LLAH Q+ YR++G FVA   +WD L++FFV YR+++MA+L+H A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  250  NHTNVLMHVQGYFKQDLTSKQRQALSQLILEYRQGIQPLLAPLTLINHYLSEYPDNYLSK  309
            NHTNVLMH+QGYF + L S+QR  L ++IL YR G  P+LAPLTL++HYL+E PD+YL  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  310  QKYFYPYPQSLRLRYGL  326
            Q+YF PYP++L LR ++
Sbjct  302  QNYFEPYPDTLGLRLAI  318

90) A225_2662 in NC_018106


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  342 bits (1283),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 197/249 (80%), Positives = 228/249 (92%), Gaps = 0/249 (0%)

Query  1    MRFTHAPHDDVTEKMADFASAHLSTLGALSGFIVCAKSPSCGMERVRLYDEKGNRGRKEG  60
            MR++HAPHDDVTE+M  FA   L+T+G L+GFIVCAKSPSCGMERVRLYDEKGNRGRK G
Sbjct  70   MRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAG  129

Query  61   TGLFTAALMEKYPWLPVEEDGRLHDPVLRENFVERVFALHELNCLHKNGLTRRALLDFHS  120
            TGLFTAA+M+KYPWLP+EEDGRLHDPVLRENF+ R+FALHELN L+ +GL+R++LL FHS
Sbjct  130  TGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHS  189

Query  121  RYKLQLLAHHQAGYREIGPFVASLHEWQDLEAFFAIYREKLMTILKQPASRKNHTNVLMH  180
            RYKLQLLAHHQAGYREIGPFVA LHEW+DL+AFF  YREKLM+IL++PASRKNHTNVLMH
Sbjct  190  RYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMH  249

Query  181  IQGYFRNQLNSRQRGELREVILNYRSGllpilapltllKHYLAEYPDRYLQTQNYFDPYP  240
            IQGYF+  LNSRQR+ELREVIL YR+G LPILAPLTLLKHYLAE PD YL++QNYF+PYP
Sbjct  250  IQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYP  309

Query  241  QDLALRLTV  249
            + L+LRL++
Sbjct  310  DTLGLRLAI  318

91) ybgA in NC_021591


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  342 bits (1285),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 183/315 (59%), Positives = 246/315 (79%), Gaps = 0/315 (0%)

Query  1    MSDKIPVGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFESVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F ++ LAP V + ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   SKQQHPSPAMRFSNDDSVDVTDKMQRFSEQRVAELGHLCGYIVCAKSPSCGMERVRVYSE  120
             +       MR+S+    DVT++M+ F+++ ++ +G+L G+IVCAKSPSCGMERVR+Y E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGKESRKNGVGLFTAELLRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLT  180
            +G+ +RK G GLFTA ++ + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGGLIAFHSRYKLSLLAHSQPEYRELGRFVAGIEKWASLEAFAIEYRSRLMRLLAHKATR  240
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA ++ W  L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSSAQRQELAQLIDRYRQGMQPLLAPITLLKHYMAEYPDRYLA  300
            +NHTNVLMH+QGYF+R L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  DQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

92) M621_06295 in NC_021659


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  342 bits (1285),  Expect = 1e-95, Method: Compositional matrix adjust.
 Identities = 183/315 (59%), Positives = 246/315 (79%), Gaps = 0/315 (0%)

Query  1    MSDKIPVGISACLLGDAVRFDGGHKRLAFAVEQLAPYVRFESVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F ++ LAP V + ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   SKQQHPSPAMRFSNDDSVDVTDKMQRFSEQRVAELGHLCGYIVCAKSPSCGMERVRVYSE  120
             +       MR+S+    DVT++M+ F+++ ++ +G+L G+IVCAKSPSCGMERVR+Y E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  NGKESRKNGVGLFTAELLRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLT  180
            +G+ +RK G GLFTA ++ + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGGLIAFHSRYKLSLLAHSQPEYRELGRFVAGIEKWASLEAFAIEYRSRLMRLLAHKATR  240
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA ++ W  L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSSAQRQELAQLIDRYRQGMQPLLAPITLLKHYMAEYPDRYLA  300
            +NHTNVLMH+QGYF+R L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  DQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

93) Ser39006_1860 in NC_022268


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  341 bits (1280),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 187/309 (61%), Positives = 238/309 (78%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRFSFAVEQLTPYFGFESICPEMAIGLPVPRPALRLVKDDQG  67
            VGIS+CL G  VRFDGGHKR  F ++ L+P  ++ +ICPE+AIGLPVPRPALRL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   MVTMRASNGAPLDVTEKMQLFATESTQKLMHLCGYIVCAKSPSCGMERVKVYDESQKNAR  127
             + MR S+++  DVTE+M+ FA      + +L G+IVCAKSPSCGMERV++YDE  + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGVGLFTQQLMTLMPWLPVEEDGRLHDPVLRENFIERVFTLYELNRLWQQGLSRGALMN  187
            K+G GLFT  +M   PWLP+EEDGRLHDPVLRENFI R+F+L ELN L+ QGLSR +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPGYRELGRFVAAMEQWDSLADFAAEYRLRLMKLLSHPASRRNHTNV  247
            FHSRYKL LLAH Q+GYRE+G FVA +++WD L  F   YR +LM +L HPASR+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLTTLQRQELTHLIERYRQGMQPLLAPITLLRHYLSEYPDAYLSQQRYFD  307
            LMH+QGYF+R L + QR EL ++I  YR G  P+LAP+TLL+HYL+E PD YL  Q YF+
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

94) Dd703_1133 in NC_012880


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  341 bits (1280),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 188/316 (60%), Positives = 248/316 (79%), Gaps = 3/316 (0%)

Query  1    MTLNPIPVGISACLLGNPVRFDGGHKRLAFAVEQLAAFFRFEPLCPEMAVGLPVPRPALR  60
            M  +P+ VGIS+CL G  VRFDGGHKR+ F ++ LA+   + P+CPE+A+GLPVPRPALR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  61   LVKDGQGDIALQASNGSGLDVTQPMHEFAAGIVPTLASLCGYIVCAKSPSCGMERVKVYD  120
            L++   GDI ++ S+++  DVT+ M+ FA  ++PT++ L G+IVCAKSPSCGMERV++YD
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  GAG--ARKSGVGLFTRQLMMALPWLPVEEDGRLHDPVLRENFIERVYALHELQQLWRQGV  178
              G  +RK+G GLFT  +M   PWLP+EEDGRLHDPVLRENFI R++ALHEL+ L+ QG+
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  SRGALMVFHSRYKLLLLAHSQPEYRELGRFVASMDQWNSLEAFAAEYRLRLMRLLAHPAS  238
            SR +L+ FHSRYKL LLAH Q+ YRE+G FVA +++W+ L+AF   YR +LM +L HPAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RRNHTNVLMHIQGYFRRHLSARQRQALSDLIDRYRRGTQPLLAPMTLLRHYLSEYPDAYL  298
            R+NHTNVLMHIQGYF+R L++RQR  L ++I  YR G  P+LAP+TLL+HYL+E PD YL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  LEQRYFDPYPEALRLR  314
              Q YF+PYP++L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

95) W5S_3104 in NC_017845


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  341 bits (1281),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 185/309 (60%), Positives = 244/309 (79%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLTFAAEQLAPYFRFEPVCPEMAIGLPVPRPALRLVREGES  67
            VGIS+CL G  VRFDGGHKR+ F  + LAP   + P+CPE+AIGLPVPRPALRL++   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   HITLRASNGSPLDVTQQMTVFSADKVSELQHLCGYIVCAKSPSCGMERVKVYDEAQKDAR  127
            +I +R S+++  DVT++M  F+   ++ + +L G+IVCAKSPSCGMERV++YDE  + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGIGLFTQELMRQMPWLPVEEDGRLQDPGLRENFIERVYALHELNQLWQNGLSRGALIA  187
            K+G GLFT  +M + PWLP+EEDGRL+DP LRENFI R++ALHELN L+ +GLSR +L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPEYRELGPFVAGIDKWESLEDYIVEYRIRLMKLLSTPATRRNHTNV  247
            FHSRYKL LLAH Q+ YRE+GPFVA ++ W+ L+ ++V YR +LM +L  PA+R+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLNSQQRQELAQLIDRYRQGLQPLLAPITLLKHYMAEYPDAYLAQQRYFE  307
            LMH+QGYF+R LNS+QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL  Q YFE
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

96) M495_05625 in NC_021741


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  341 bits (1280),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 189/315 (60%), Positives = 249/315 (80%), Gaps = 1/315 (0%)

Query  1    MSDKIPVGISACLLGETVRFDGGHKRLAFAVEQLAPFVRFEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G TVRFDGGHKR+ F ++ LAP V + PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IKKQ-HHVALRHSNDDSIDVTERMQQFSEQRIAALQHLCGYIVCANSPSCGMERVRLYDE  119
            I+    ++ +R S+    DVTERM+ F+++ ++++ +L G+IVCA+SPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NGSGARKSGVGLFTAELLRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLS  179
            +G+ +RK+G GLFTA ++ + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGGLIAFHSRYKLSLLAHSQQEYRELGRFVAGIDKWDSLEAFTLEYRSRLMKLLAHKATR  239
            R +L+AFHSRYKL LLAH Q  YRE+G FVA ++ WD L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRNHLSSAQRQELAQLIDRYRQGVQPLLAPITLLKHYMAEYPDRYLA  299
            +NHTNVLMH+QGYF+  L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  DQRYFEPYPEALRLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

97) Dda3937_01547 in NC_014500


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  339 bits (1273),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 183/309 (60%), Positives = 245/309 (80%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLAFAVEQLAPYFHFEPVCPEMAIGLPVPRPALRLVKSDEG  67
            VGIS+CL G  VRFDGGHKR+ F ++ LAP   + P+CPE+AIGLPVPRPALRL+++  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   GLRLLASNGSGLDVTDKMAAFSAEKAAQLAHLCGYIVCAKSPSCGMERVKIYDAGQQNAR  127
            ++R+  S+++  DVT++M AF+    + +++L G+IVCAKSPSCGMERV++YD   + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGVGLFTQQVRETLPWLPVEEDGRLHDPALRENFIARVYALHEFNQLWKKGLSRGALMG  187
            K+G GLFT  + +  PWLP+EEDGRLHDP LRENFIAR++ALHE+N L+ +GLSR +L++
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPEYRELGPFVAAMDQWDSLEAFAEQYRLRLMRLLSHPASRRNHTNV  247
            FHSRYKL LLAH Q+ YRE+GPFVA +++WD L+AF  +YR +LM +L HPASR+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLTAGQRQELTQLIDRYRQGMQPLLAPLTLLRHYMTEYPDAWLAQQRYFD  307
            LMH+QGYF+R L + QR EL ++I  YR G  P+LAPLTLL+HY++E PD  L  Q YF+
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

98) Dd1591_2925 in NC_012912


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  339 bits (1273),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 181/309 (59%), Positives = 244/309 (79%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLAFAVEQLAPYFHFEPVCPEMGIGLPVPRPALRLVKSDSG  67
            VGIS+CL G  VRFDGGHKR+ F ++ LAP   + P+CPE++IGLPVPRPALRL+++  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   EIRLLASNGSGLDVTENMAAFSTARTAQLAHLCGYIVCAKSPSCGMERVKVYEAEQNNAR  127
            +IR+  S+++  DVTE M AF+    + +++L G+IVCAKSPSCGMERV++Y+   N +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGVGLFTRQLQQTLPWLPVEEDGRLQDPLLRENFITRVYALHEFNQLWEKGLSRSALMR  187
            K+G GLFT  + +  PWLP+EEDGRL+DP+LRENFI+R++ALHE+N L+ +GLSR +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPAYRELGPFVAAMDQWASLEAFAAEYRLRLMRLLSRPASRRNHTNV  247
            FHSRYKL LLAH Q++YRE+GPFVA +++W  L+AF   YR +LM +L +PASR+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLTAGQRQELAQLIERYRQGVQPLLAPLTLLRHYMTEYPDDWLSQQRYFD  307
            LMH+QGYF+R L + QR EL ++I  YR G  P+LAPLTLL+HY++E PDD L  Q YF+
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

99) BB2000_1027 in NC_022000


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  339 bits (1273),  Expect = 1e-94, Method: Compositional matrix adjust.
 Identities = 171/317 (54%), Positives = 251/317 (80%), Gaps = 0/317 (0%)

Query  10   HKKIIVGISSCLLGDKVRFDGGHKCCHLAADELSEFFEYQSTCPEMAIGLPTPRPALRLV  69
            ++K +VGIS+CL G  VRFDGGHK  ++  + L+    Y++ CPE+AIGLP PRPALRL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  70   QSKTGEVRLKFSNGSEGDLTQLMNDYSIEYLRRFNQFSGYIVCAKSPSCGLERVRVYDPI  129
            Q+  G++R+++S+++++D+T+ MN ++  +L  + +++G+IVCAKSPSCG+ERVR+YD  
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  130  GNGNKKSGTGIFTENLKRIMPWLPIEEDGRLNDPYIRENFITRVFALNELNQLKINNFTR  189
            GN  +K+GTG+FT  +    PWLPIEEDGRL+DP +RENFI+R+FAL+ELN L+ + ++R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  190  QALIDFHTRHKLLLLAHSQPLYRQLGRFVANNKDWDSLETFFVEYRNRFMALLQHQATRR  249
            ++L+ FH+R KL LLAH Q+ YR++G FVA   +WD L++FFV YR+++MA+L+H A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  250  NHTNVLMHVQGYFKHDLTSKQRQALSQLILEYRQGIQPLLAPLTLINHYLSEYPDNYLSK  309
            NHTNVLMH+QGYF + L S+QR  L ++IL YR G  P+LAPLTL++HYL+E PD+YL  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  310  QKYFYPYPQSLRLRYGL  326
            Q+YF PYP++L LR ++
Sbjct  302  QNYFEPYPDTLGLRLAI  318

100) Pecwa_3113 in NC_013421


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  338 bits (1270),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 184/309 (60%), Positives = 243/309 (79%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLTFAAEQLAPYFRFEPVCPEMAIGLPVPRPALRLVREGES  67
            VGIS+CL G  VRFDGGHKR+ F  + LAP   + P+CPE+AIGLPVPRPALRL++   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   HITLRASNGSPLDVTQQMTVFSADKVSGLQHLCGYIVCAKSPSCGMERVKVYDEAQKDAR  127
            +I +R S+++  DVT++M  F+   ++ + +L G+IVCAKSPSCGMERV++YDE  + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGIGLFTQELMRQMPWLPVEEDGRLQDLGLRENFIERVYALHELNQLWQNGLSRGALIA  187
            K+G GLFT  +M + PWLP+EEDGRL+D  LRENFI R++ALHELN L+ +GLSR +L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPEYRELGPFVAGIDKWESLEDYIVEYRIRLMKLLSTPATRRNHTNV  247
            FHSRYKL LLAH Q+ YRE+GPFVA ++ W+ L+ ++V YR +LM +L  PA+R+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFRRQLNSQQRQELAQLIDRYRQGLQPLLAPITLLKHYMAEYPDAYLAQQRYFE  307
            LMH+QGYF+R LNS+QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL  Q YFE
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

101) Spro_1251 in NC_009832


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  337 bits (1264),  Expect = 7e-94, Method: Compositional matrix adjust.
 Identities = 183/315 (59%), Positives = 246/315 (79%), Gaps = 1/315 (0%)

Query  1    MSDKIPVGISACLLGEKVRFDGGHKRLAFAVEQLAPYVRFEAICPEMAIGLSTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR+ F ++ LAP V + +ICPE+AIGL+ PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IKKQ-HHVALRYSNDDSIDVTDQMQQFSTQRIAALQHLCGYIVCANSPSCGMERVRLYDE  119
            I+    ++ +RYS+    DVT++M+ F+ + ++++ +L G+IVCA+SPSCGMERVRLYDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  SGAGARKSGVGLFTAELQRQMPWLPVEEDGRLNDATLRENFVERVYALYELNMLWRKGLT  179
             G  +RK+G GLFTA +  + PWLP+EEDGRL+D+ LRENF+ R++AL ELN L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RGGLIAFHSRYKLSLLAHSQPEYRELGRFVADVDKWESLEAFAIEYRSRLMRLLAHKATR  239
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA ++ W+ L+AF + YR +LM +L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  240  RNHTNVLMHVQGYFRSHLSSTQRQELAQLIDRYRQGVQPLLAPITLLKHYMAEYPDRYLA  299
            +NHTNVLMH+QGYF+  L+S QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  300  DQRYFEPYPEALRLR  314
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

102) EbC_12830 in NC_014306


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  335 bits (1258),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 178/315 (57%), Positives = 236/315 (75%), Gaps = 0/315 (0%)

Query  1    MSEKIPVGISACLLGDNVRFDGGHKRCAFATEDLAPFIRYEPACPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR  F  + LAP + Y P CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TENGDDLPALCFSNGKGDPVTEAMQSYAEKRVSALHHLCGYIVCAKSPSCGMERVRVYQA  120
             +   +   + +S++  D VTE M+++A++ ++++ +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKEGVGVFTRELMAQMPWLPVEEDGRLHDPVLRENFVERVYTLHEFNELWRSGLT  180
              N  RK G G+FT  +M + PWLP+EEDGRLHDPVLRENF+ R+++LHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RGKLMAFHSRYKLSLLAHSQPEYREMGRFVAAMADWSSLEEYAFEYRQRLMDLLKNQATR  240
            R  L+AFHSRYKL LLAH Q+ YRE+G FVA + +W  L+ +   YR++LM +L++ A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  GNHTNVLMHVQGYFRPQLTSKQRQELTSLIEHYRQGMQPLLAPITLLKHYMAEYPDAYLA  300
             NHTNVLMH+QGYF+  L S+QR EL  +I  YR G  P+LAP+TLLKHY+AE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  QQRYFEPYPEALRLR  315
             Q YFEPYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

103) ETA_23190 in NC_010694


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  333 bits (1249),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 253/315 (81%), Gaps = 0/315 (0%)

Query  1    MDKKIPVGISACLLGERVRFDGGHKRSEFAAQQLAPFLRYEPVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR +F  + LAP + Y P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TEAAQGEISLCFSNGNDLPVTEKMQAFSEQKVSQLHHLCGYIVCAKSPSCGMERVRIYQP  120
             +++ G+I + +S++ +  VTE+M+AF+++ ++ + +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKAGTGVFTRELMEKMPWLPVEEDGRLHDPLLRENFVARVYALHEFNQLWRAGLT  180
              N  RKAGTG+FT  +M+K PWLP+EEDGRLHDP+LRENF+AR++ALHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RAKLMAFHTQYKLLLLAHSQPAYRQIGPFVAKMDQWASLEAFAHEYRQRLMDLMQQPATR  240
            R  L+AFH++YKL LLAH Q++YR+IGPFVA++++W  L+AF   YR++LM ++++PA+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  TNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQGllpllapitllKHYMTEFPHPWLA  300
             NHTNVLMH+QGYF+R L S QR EL  VI +YR G LP+LAP+TLLKHY++E P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  GQRYFAPYPEALRLR  315
            +Q YF PYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

104) EAM_1159 in NC_013971


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  330 bits (1238),  Expect = 7e-92, Method: Compositional matrix adjust.
 Identities = 185/315 (59%), Positives = 249/315 (80%), Gaps = 0/315 (0%)

Query  1    MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR +F  + LAP + Y PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TEAAQGDISLSFSNGSDLPVTEKMQAFSEEKISQLHHLCGYIVCAKSPSCGMERVRIYQP  120
             +++ GDI + +S++++  VTE+M+AF++  ++ + +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKAGTGVFTRELMAQMPWLPVEEDGRLHDPLLRENFVARVYALHEFNRLWRSGLT  180
              N  RKAGTG+FT  +M + PWLP+EEDGRLHDP+LRENF+AR++ALHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RAKLMAFHTRYKLLLLAHSQPDYRQIGPFVAKMDQWASLEAFAAEYRQRLMDLMQHPATR  240
            R  L+AFH+RYKL LLAH Q++YR+IGPFVA++++W  L+AF   YR++LM +++HPA+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  SNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQQllpllapitllKHYMTQFPHPWLA  300
             NHTNVLMH+QGYF+R L S QR EL  VI +YR   LP+LAP+TLLKHY+++ P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  EQRYFAPYPEVLRLR  315
             Q YF PYP+ L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

105) ybgA in NC_013961


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  330 bits (1238),  Expect = 7e-92, Method: Compositional matrix adjust.
 Identities = 185/315 (59%), Positives = 249/315 (80%), Gaps = 0/315 (0%)

Query  1    MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR +F  + LAP + Y PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TEAAQGDISLSFSNGSDLPVTEKMQAFSEEKISQLHHLCGYIVCAKSPSCGMERVRIYQP  120
             +++ GDI + +S++++  VTE+M+AF++  ++ + +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKAGTGVFTRELMAQMPWLPVEEDGRLHDPLLRENFVARVYALHEFNRLWRSGLT  180
              N  RKAGTG+FT  +M + PWLP+EEDGRLHDP+LRENF+AR++ALHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RAKLMAFHTRYKLLLLAHSQPDYRQIGPFVAKMDQWASLEAFAAEYRQRLMDLMQHPATR  240
            R  L+AFH+RYKL LLAH Q++YR+IGPFVA++++W  L+AF   YR++LM +++HPA+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  SNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQQllpllapitllKHYMTQFPHPWLA  300
             NHTNVLMH+QGYF+R L S QR EL  VI +YR   LP+LAP+TLLKHY+++ P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  EQRYFAPYPEVLRLR  315
             Q YF PYP+ L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

106) ybgA in NC_014562


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  329 bits (1234),  Expect = 1e-91, Method: Compositional matrix adjust.
 Identities = 175/315 (56%), Positives = 239/315 (76%), Gaps = 0/315 (0%)

Query  1    MSKKIPVGISACLLGDSVRFDGGHKRLTFATEDLTPFVRFEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F  + L+P V + PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKQGDDEVHLCFSKDGGEEVTAQMRDWSAERVKSLHHLSGYILCAKSPSCGMERVRVYEP  120
            ++   +++++ +S    ++VT +M   +   + ++ +L+G+I+CAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKVGTGIFAEFLQREMPWLPLEEDGRLHDPALRENFIGRICALHEFNQMWESGLT  180
              N  RK GTG+F+  +    PWLP+EEDGRLHDP LRENFI+RI ALHE+N ++  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHGLIAFHSRYKLMMLAHSQEKYRELGPFVASMSQWDSLDAFAFEYRNRMMELMSRPASR  240
            RH+L+AFHSRYKL +LAH Q  YRE+GPFVA + +WD LDAF   YR+++M ++ +PASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLSSPQRQELATLIDRYRQGTQPLLVPITILKHYMAEFPHPWLA  300
            +NHTNVLMH+QGYF+R L+S QR EL  +I  YR G  P+L P+T+LKHY+AE P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  QQRYFDPYPEALCLR  315
             Q YF+PYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

107) ybgA in NC_017531


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  328 bits (1230),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 178/316 (57%), Positives = 242/316 (77%), Gaps = 1/316 (0%)

Query  1    MSEKIPVGISACLLGESVRFDGGHKRLAFATDQLTPFVRFEPVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F  + L+P V + P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMGDDDALHLCFSKEGGEDITDKMRDWSENRVKSLHHLCGYILCAKSPSCGMERVRIYE  120
            ++   +D +++ +S    +D+T++M   ++  + ++ +L G+I+CAKSPSCGMERVR+Y+
Sbjct  61   IQTTCGD-IRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  PATNNNRKAGTGIFTAFLQREMPWLPLEEDGRLNDPTLRENFIGRICALHEFNQMWKQGL  180
               N  RKAGTG+FTA +    PWLP+EEDGRL+DP LRENFI+RI ALHE+N ++ QGL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  TRHNLMAFHSRYKLLLLAHSQKKYRELGPFVASMNQWESLEAFAFEYRSRLMDLMSQPAS  240
            +RH+L+AFHSRYKL LLAH Q  YRE+GPFVA +++W+ L+AF   YR +LM ++ +PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  241  RTNHTNVLMHVQGYFRSQLSSPQRKELTSLIDCYRQGTQPLLAPITILKHYMAEYPHPWL  300
            R NHTNVLMH+QGYF+  L+S QR EL  +I  YR G  P+LAP+T+LKHY+AE P+  L
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  301  TQQRYFDPYPEALRLR  316
              Q YF+PYP++L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

108) ybgA in NC_013956


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  328 bits (1230),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 178/316 (57%), Positives = 242/316 (77%), Gaps = 1/316 (0%)

Query  1    MSEKIPVGISACLLGESVRFDGGHKRLAFATDQLTPFVRFEPVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F  + L+P V + P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMGDDDALHLCFSKEGGEDITDKMRDWSENRVKSLHHLCGYILCAKSPSCGMERVRIYE  120
            ++   +D +++ +S    +D+T++M   ++  + ++ +L G+I+CAKSPSCGMERVR+Y+
Sbjct  61   IQTTCGD-IRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  PATNNNRKAGTGIFTAFLQREMPWLPLEEDGRLNDPTLRENFIGRICALHEFNQMWKQGL  180
               N  RKAGTG+FTA +    PWLP+EEDGRL+DP LRENFI+RI ALHE+N ++ QGL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  TRHNLMAFHSRYKLLLLAHSQKKYRELGPFVASMNQWESLEAFAFEYRSRLMDLMSQPAS  240
            +RH+L+AFHSRYKL LLAH Q  YRE+GPFVA +++W+ L+AF   YR +LM ++ +PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  241  RTNHTNVLMHVQGYFRSQLSSPQRKELTSLIDCYRQGTQPLLAPITILKHYMAEYPHPWL  300
            R NHTNVLMH+QGYF+  L+S QR EL  +I  YR G  P+LAP+T+LKHY+AE P+  L
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  301  TQQRYFDPYPEALRLR  316
              Q YF+PYP++L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

109) PAGR_g3000 in NC_017554


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  328 bits (1230),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 178/316 (57%), Positives = 242/316 (77%), Gaps = 1/316 (0%)

Query  1    MSEKIPVGISACLLGESVRFDGGHKRLAFATDQLTPFVRFEPVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F  + L+P V + P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMGDDDALHLCFSKEGGEDITDKMRDWSENRVKSLHHLCGYILCAKSPSCGMERVRIYE  120
            ++   +D +++ +S    +D+T++M   ++  + ++ +L G+I+CAKSPSCGMERVR+Y+
Sbjct  61   IQTTCGD-IRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  PATNNNRKAGTGIFTAFLQREMPWLPLEEDGRLNDPTLRENFIGRICALHEFNQMWKQGL  180
               N  RKAGTG+FTA +    PWLP+EEDGRL+DP LRENFI+RI ALHE+N ++ QGL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  TRHNLMAFHSRYKLLLLAHSQKKYRELGPFVASMNQWESLEAFAFEYRSRLMDLMSQPAS  240
            +RH+L+AFHSRYKL LLAH Q  YRE+GPFVA +++W+ L+AF   YR +LM ++ +PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  241  RTNHTNVLMHVQGYFRSQLSSPQRKELTSLIDCYRQGTQPLLAPITILKHYMAEYPHPWL  300
            R NHTNVLMH+QGYF+  L+S QR EL  +I  YR G  P+LAP+T+LKHY+AE P+  L
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  301  TQQRYFDPYPEALRLR  316
              Q YF+PYP++L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

110) ybgA in NC_016816


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  328 bits (1230),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 178/316 (57%), Positives = 242/316 (77%), Gaps = 1/316 (0%)

Query  1    MSEKIPVGISACLLGESVRFDGGHKRLAFATDQLTPFVRFEPVCPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G +VRFDGGHKR+ F  + L+P V + P+CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKMGDDDALHLCFSKEGGEDITDKMRDWSENRVKSLHHLCGYILCAKSPSCGMERVRIYE  120
            ++   +D +++ +S    +D+T++M   ++  + ++ +L G+I+CAKSPSCGMERVR+Y+
Sbjct  61   IQTTCGD-IRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  PATNNNRKAGTGIFTAFLQREMPWLPLEEDGRLNDPTLRENFIGRICALHEFNQMWKQGL  180
               N  RKAGTG+FTA +    PWLP+EEDGRL+DP LRENFI+RI ALHE+N ++ QGL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  TRHNLMAFHSRYKLLLLAHSQKKYRELGPFVASMNQWESLEAFAFEYRSRLMDLMSQPAS  240
            +RH+L+AFHSRYKL LLAH Q  YRE+GPFVA +++W+ L+AF   YR +LM ++ +PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  241  RTNHTNVLMHVQGYFRSQLSSPQRKELTSLIDCYRQGTQPLLAPITILKHYMAEYPHPWL  300
            R NHTNVLMH+QGYF+  L+S QR EL  +I  YR G  P+LAP+T+LKHY+AE P+  L
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  301  TQQRYFDPYPEALRLR  316
              Q YF+PYP++L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

111) EJP617_22760 in NC_017445


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  328 bits (1229),  Expect = 4e-91, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 250/315 (80%), Gaps = 0/315 (0%)

Query  1    MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR +F  + LAP + Y PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TEAAQGGISLSFSNGSDLPVTEKMQAFSEKKISQLHHLCGYIVCAKSPSCGMERVRIYQP  120
             +++ G+I + +S++++  VTE+M+AF+++ ++ + +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKAGIGVFTRELMAQMPWLPVEEDGRLHDPLLRENFVARVYALHEFNQLWRSGLT  180
              N  RKAG G+FT  +M + PWLP+EEDGRLHDP+LRENF+AR++ALHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RASLMAFHTRYKLLLLAHSQPAYRQIGPFVAGIGQWASLEAFAREYRQRLMDLMQHPATR  240
            R SL+AFH+RYKL LLAH Q++YR+IGPFVA + +W  L+AF   YR++LM +++HPA+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQEllpllapitllKHYMTQFPHPWLA  300
            +NHTNVLMH+QGYF+R L S QR EL  VI +YR   LP+LAP+TLLKHY+++ P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  GQRYFAPYPEVLRLR  315
            +Q YF PYP+ L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

112) D781_1173 in NC_020064


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  328 bits (1229),  Expect = 4e-91, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 246/315 (79%), Gaps = 2/315 (0%)

Query  1    MGDQIPIGISACLLGASVRFDGGHKRLDFAVSQLAPHVRFVPLCPEMAIGLPVPRPALRL  60
            M ++  +GIS+CL GA+VRFDGGHKR+DF ++ LAP V + P+CPE+AIGLPVPRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKKS-GQVALCHSQNAEIDLTAEMRQFSARHVAELSSLCGYIVCAKSPSCGMERVRVYDE  119
            ++ + G++ +  S+ ++ D+T  M  F+ R ++ ++ L G+IVCAKSPSCGMERVR+YDE
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NHG-ARKNGVGLFTAELMRQMPWLPVEEDGRLQDTALRENFIERVCALHEFNTLWRDGLT  178
            +   +RK G GLFTA +M + PWLP+EEDGRL+D  LRENFI R+ ALHE+N+L+ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  179  RAALIAFHSRYKLSLLAHSQTEYRELGRFVADIALWPSLEAFAYAYRQRLMTLLTHKATR  238
            R +L+AFHSRYKL LLAH Q+ YRE+G FVA +  W  L+AF   YR++LM++L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  239  RNHTNVLMHVQGYFRRWLSPSQRQELTLLIERYRQGTQPLLAPITLLKHYLAEFPDVYLA  298
            +NHTNVLMH+QGYF+R L++ QR EL  +I  YR G  P+LAP+TLLKHYLAE PD YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  299  QQRYFDPYPEALRLR  313
             Q YF+PYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

113) ybgA in NC_017390


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  325 bits (1220),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 248/315 (79%), Gaps = 0/315 (0%)

Query  1    MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR +F  + LAP + Y PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TEAAQGDISLSFSNGSDLPVTEKMQAFSEKKISQLHHLCGYIVCAKSPSCGMERVRIYQP  120
             +++ GDI + +S++++  VTE+M+AF+++ ++ + +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKAGTGVFTRELMAQMPWLPVEEDGRLHDPLLRENFVARVYALHEFNQLWRSGLT  180
              N  RKAGTG+FT  +M + PWLP+EEDGRLHDP+LRENF+AR++ALHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RARLMAFHTRYKLLLLAHSQPAYRQIGPFVAGIGQWASLEAFAREYRLRLMDLMQHPSTR  240
            R  L+AFH+RYKL LLAH Q++YR+IGPFVA + +W  L+AF   YR +LM +++HP++R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  SNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQEllpllapitllKHYMTQFPHPWLA  300
             NHTNVLMH+QGYF+R L S QR EL  VI +YR   LP+LAP+TLLKHY+++ P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  GQRYFAPYPEVLRLR  315
            +Q YF PYP+ L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

114) EpC_24530 in NC_012214


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  325 bits (1220),  Expect = 2e-90, Method: Compositional matrix adjust.
 Identities = 184/315 (59%), Positives = 248/315 (79%), Gaps = 0/315 (0%)

Query  1    MDKKIPVGISACLLGERVRFDGGHKRCEFAAQQLAPFLRYEPICPEMAIGLPTPRPALRL  60
            M++K  VGIS+CL G  VRFDGGHKR +F  + LAP + Y PICPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TEAAQGDISLSFSNGSDLPVTEKMQAFSEKKISQLHHLCGYIVCAKSPSCGMERVRIYQP  120
             +++ GDI + +S++++  VTE+M+AF+++ ++ + +L G+IVCAKSPSCGMERVR+Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DNNNNRKAGTGVFTRELMAQMPWLPVEEDGRLHDPLLRENFVARVYALHEFNQLWRSGLT  180
              N  RKAGTG+FT  +M + PWLP+EEDGRLHDP+LRENF+AR++ALHE+N L+  GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RARLMAFHTRYKLLLLAHSQPAYRQIGPFVAGIGQWASLEAFAREYRLRLMDLMQHPSTR  240
            R  L+AFH+RYKL LLAH Q++YR+IGPFVA + +W  L+AF   YR +LM +++HP++R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  SNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQEllpllapitllKHYMTQFPHPWLA  300
             NHTNVLMH+QGYF+R L S QR EL  VI +YR   LP+LAP+TLLKHY+++ P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  GQRYFAPYPEVLRLR  315
            +Q YF PYP+ L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

115) ECA1348 in NC_004547


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  323 bits (1210),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 182/309 (59%), Positives = 244/309 (79%), Gaps = 0/309 (0%)

Query  8    VGISACLLGNPVRFDGGHKRLTFAVEELAPYFRFESVCPEMAIGLPVPRPALRLVREGES  67
            VGIS+CL G  VRFDGGHKR+ F ++ LAP   + ++CPE+AIGLPVPRPALRL++   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   HVTMRASNGSSLDVTQQITVFSADKVSQLQHLCGYIVCAKSPSCGMERVKVYDEAQKNAR  127
            ++ MR S+++  DVT+++  F+   ++ + +L G+IVCAKSPSCGMERV++YDE  + +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KSGVGLFTQELMRQMPWLPVEEDGRLHDSGLRENFIERVYALHELNQLWKNGLSRGALIA  187
            K+G GLFT  +M + PWLP+EEDGRLHD+ LRENFI R++ALHELN L+ +GLSR +L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKLLLLAHSQPEYRELGPFVAGIDKWESLEEYVVEYRTRLMKLLSTPATRRNHTNV  247
            FHSRYKL LLAH Q+ YRE+GPFVA ++ W+ L+ + V YR +LM +L  PA+R+NHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LMHVQGYFrrqlssqqrqelaqlIDRYRQGLQPLLAPITLLKHYMAEYPDAYLAQQRYFE  307
            LMH+QGYF+R L+S+QR EL ++I  YR G  P+LAP+TLLKHY+AE PD YL  Q YFE
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPEALRLR  316
            PYP++L LR
Sbjct  307  PYPDTLGLR  315

116) Pat9b_1100 in NC_014837


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  320 bits (1200),  Expect = 8e-89, Method: Compositional matrix adjust.
 Identities = 169/315 (54%), Positives = 237/315 (76%), Gaps = 0/315 (0%)

Query  1    MREKIPVGISACLLGDNVRFDGGHKRFAFATDELSPFVQFDAVCPEMAIGLPTPRPALRL  60
            M +K  VGIS+CL G  VRFDGGHKR  F  + L+P V + ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VKEDDARVHLCFSKTGGDEVTDQMAQWSAQRVQSLHHLCGYILCAKSPSCGLERVRVYDP  120
            ++   + +++ +S +  D+VT++M   + + + ++ +L G+I+CAKSPSCG+ERVR+YD 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  121  DTNNNRKAGTGIFTEFLQRELPWLPLEEDGRLHDAEIRENFIGRVYALHEFNQMWRNGLT  180
              N  RKAGTG+FT  +    PWLP+EEDGRLHD+ +RENFI+R++ALHE+N ++ +GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  181  RHQLVAFHSRFKLLLLSHSQDEYRELGRFVAKMETWASLEDYAFEYRNRLMRLLAHPSTR  240
            RH L+AFHSR+KL LL+H Q  YRE+G FVA+++ W  L+ +   YR++LM +L HP++R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  241  RNHTNVLMHVQGYFRRQLTSAQRQELALLIDRYRRGVQPLLAPITMLKHYMAEFPHPWLA  300
            +NHTNVLMH+QGYF+R L S QR EL  +I  YR G  P+LAP+T+LKHY+AE P+  L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  301  QQRYFDPYPEALRLR  315
             Q YF+PYP++L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

117) ETAE_2598 in NC_013508


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  318 bits (1193),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 183/316 (58%), Positives = 237/316 (75%), Gaps = 3/316 (0%)

Query  1    MSSAIPVGISACLLGQTVRFDGGHRRFAFAADTLAPFFHFLPLCPEMGIGLPSPRPALRL  60
            M++   VGIS+CL G TVRFDGGH+R  F  ++LAP   + P+CPE++IGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IRHDASSSVALVNSRDPTLDYTAAMEDFAARQLPQLQSLCGFILCARSPSCGMERVKVY-  119
            I + + + + +  S+ P  D T  M+ FA R LP +  L GFI+CA+SPSCGMERV++Y 
Sbjct  61   I-QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  120  -TSHEARKNGVGLFAAALMTVMPWLPVEEDGRLSDGALRENFIARVYALHEFNQLWPSGL  178
              ++ +RK G GLF+AA+M   PWLP+EEDGRL D  LRENFIAR++ALHE+N L++ GL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  SRGALVAFHSRYKLLLLAHSQPAYRALGRMVAEIGQWPSTTAFATEYRHRLMALMRQPAS  238
            SR +L+AFHSRYKL LLAH Q++YR +G  VA + +W    AF   YR++LMA++R+PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RRNHTNVLQHVQGYFSPRLNPAQRAELSQLILQYRQGVQPLLAPLTLINHYLREYPDDYL  298
            R+NHTNVL H+QGYF   LN+ QRAEL ++IL YR G  P+LAPLTL++HYL E PDDYL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  ASQRYFSPYPDALRLR  314
             SQ YF PYPD+L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

118) ybgA in NC_017309


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  318 bits (1193),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 183/316 (58%), Positives = 237/316 (75%), Gaps = 3/316 (0%)

Query  1    MSSAIPVGISACLLGQTVRFDGGHRRFAFAADTLAPFFHFLPLCPEMGIGLPSPRPALRL  60
            M++   VGIS+CL G TVRFDGGH+R  F  ++LAP   + P+CPE++IGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IRHDASSSVALVNSRDPTLDYTAAMEDFAARQLPQLQSLCGFILCARSPSCGMERVKVY-  119
            I + + + + +  S+ P  D T  M+ FA R LP +  L GFI+CA+SPSCGMERV++Y 
Sbjct  61   I-QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  120  -TSHEARKNGVGLFAAALMTVMPWLPVEEDGRLSDGALRENFIARVYALHEFNQLWPSGL  178
              ++ +RK G GLF+AA+M   PWLP+EEDGRL D  LRENFIAR++ALHE+N L++ GL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  SRGALVAFHSRYKLLLLAHSQPAYRALGRMVAEIGQWPSTTAFATEYRHRLMALMRQPAS  238
            SR +L+AFHSRYKL LLAH Q++YR +G  VA + +W    AF   YR++LMA++R+PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RRNHTNVLQHVQGYFSPRLNPAQRAELSQLILQYRQGVQPLLAPLTLINHYLREYPDDYL  298
            R+NHTNVL H+QGYF   LN+ QRAEL ++IL YR G  P+LAPLTL++HYL E PDDYL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  ASQRYFSPYPDALRLR  314
             SQ YF PYPD+L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

119) ETAC_12490 in NC_020796


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  317 bits (1190),  Expect = 5e-88, Method: Compositional matrix adjust.
 Identities = 183/316 (58%), Positives = 235/316 (75%), Gaps = 3/316 (0%)

Query  1    MSSAIPVGISACLLGQTVRFDGGHRRFAFAADTLAPFFHFLPLCPEMGIGLPSPRPALRL  60
            M++   VGIS+CL G TVRFDGGH+R  F  ++LAP   + P+CPE++IGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IRHDASSSVALVNSRDPTLDYTAAMEDFAARQLPQLQSLCGFILCARSPSCGMERVKVY-  119
            I + + + + +  S+ P  D T  M+ FA R LP +  L GFI+CA+SPSCGMERV++Y 
Sbjct  61   I-QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  120  -TPHEARKNGVGLFAAALMTAMPWLPVEEDGRLSDGALRENFIARVYALHEFNQLWQSGL  178
               + +RK G GLF+AA+M   PWLP+EEDGRL D  LRENFIAR++ALHE+N L+  GL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  SRGALVAFHSRYKLLLLAHSQPAYRALGRMVAEIGQWPSTTAFATEYRHRLMALMRQPAS  238
            SR +L+AFHSRYKL LLAH Q++YR +G  VA + +W    AF   YR++LMA++R+PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RRNHTNVLQHVQGYFSPRLNPAQRAELSQLILQYRQGVQPLLAPLTLINHYLREYPDDYL  298
            R+NHTNVL H+QGYF   LN+ QRAEL ++IL YR G  P+LAPLTL++HYL E PDDYL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  ASQRYFSPYPDALRLR  314
             SQ YF PYPD+L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

120) SG0867 in NC_007712


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  312 bits (1168),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 177/316 (57%), Positives = 237/316 (75%), Gaps = 3/316 (0%)

Query  1    MTSRIPVGISACLIGENVRFDGGHKCLAFAMDDLAPFVAFTAVCPEMAIGLPAPRPALRL  60
            M ++  VGIS+CL G  VRFDGGHK + F M+ LAP VA+ ++CPE+AIGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VQNLHGHIALRNSKEGSTIDHTASMEAFAGQRVRQLAELCGYVVCAKSPSCGMEWVRVYA  120
            +Q   G+I +R S +++  D T  M+AFA++ +  ++EL G++VCAKSPSCGME+VR+Y 
Sbjct  61   IQTTCGDIRMRYS-HAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  SQG--VQKTGVGLFTRVLQEQMPWLPVEEDGRLQDPQLRENFVARVFTLWEFNQLMRRPL  178
             +G   +K+G GLFT  + ++ PWLP+EEDGRL+DP LRENF+AR+F+L E+N L  + L
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  TRGGLMAFHRRYKLLLLEHSQPEYWQIGPFVANMDRWPSLEAFALTYRDRLMALLRHPAT  238
            +R +L+AFH RYKL LL H Q+ Y++IGPFVA ++ W  L+AF + YR++LMA+LRHPA+
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RCNHTNVLMHAQGYFYLYLTRAQRSELTGLIDSYRRGLQQLLAPITLLKHYMAEYLDAWL  298
            R NHTNVLMH QGYF   L   QR+EL  +I +YR G   +LAP+TLLKHY+AE  D  L
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  AQQRYFEPYPEALRLR  314
              Q YFEPYP++L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

121) ECB_01523 in NC_012967


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  296 bits (1107),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 165/240 (69%), Positives = 206/240 (86%), Gaps = 0/240 (0%)

Query  1    MTERMTEFSRSYMDKLKDVSGFVVCAKSPSCGMERVRVYDENGNRGRKDGVGLFTSTLME  60
            +TERM  F+  ++  + +++GF+VCAKSPSCGMERVR+YDE+GNRGRK G GLFT+++M+
Sbjct  80   VTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMD  139

Query  61   KFSWLPVEEDGRLHDPVLRENFIERVFALDELNHLYKEKLSRRELLAFHSRYKLQLLAHS  120
            K++WLP+EEDGRLHDPVLRENFI R+FAL+ELN L  + LSR+ LLAFHSRYKLQLLAH 
Sbjct  140  KYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHH  199

Query  121  QAGYKDMGPFVAAIHEWADLESYFEVYRDNLMAILRKPASRKNHTNVLMHIQGYFSNYLS  180
            QAGY+++GPFVA +HEW DL+++F  YR++LMAILR PASRKNHTNVLMHIQGYF   L+
Sbjct  200  QAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVLMHIQGYFHRALN  259

Query  181  TRQRKELSEVILNYRFGtlpllapltllKHYLGEYPNDYLLTQNYFDPYPEELALRLMVN  240
            +RQR EL EVIL YR G LP+LAPLTLLKHYL+E P+DYL +QNYF+PYP+ L+LRL + 
Sbjct  260  SRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT  319

122) NT01EI_2886 in NC_012779


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  292 bits (1095),  Expect = 1e-80, Method: Compositional matrix adjust.
 Identities = 181/316 (58%), Positives = 234/316 (75%), Gaps = 3/316 (0%)

Query  1    MSSAIPVGISACLLGQAVRFDGGHRRFAFAADTLAPFFHFLPLCPEMGIGLPSPRPALRL  60
            M++   VGIS+CL G +VRFDGGH+R  F  ++LAP   + P+CPE++IGLP PRPALRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IRREASSPVALVNSRDPALDYTVAMADFAAHQLPQLQSLCGFILCARSPSCGMERVKVY-  119
            I+  + + + +  S+ P  D T  M  FA + LP +  L GFI+CA+SPSCGMERV++Y 
Sbjct  61   IQ-TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  120  -TPYESRKSGVGLFaaalmaampwlpVEEDGRLSDGALRENFIARVYALHEFNQLWQSGL  178
                 +RK+G GLF+AA+M   PWLP+EEDGRL D  LRENFIAR++ALHE+N L+  GL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  SRGALVAFHSRYKLLLLAHSQPAYRALGRMVAEMGQWPSTAAFAAEYRHRLMALMRQPAS  238
            SR +L+AFHSRYKL LLAH Q++YR +G  VA + +W    AF   YR++LMA++R+PAS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RRNHTNVLQHVQGYFSPRLNPAQRAELSQLILQYRQGIQPLLAPLTLINHYLREYPDDYL  298
            R+NHTNVL H+QGYF   LN+ QRAEL ++IL YR G  P+LAPLTL++HYL E PDDYL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  ASQRYFSPYPDALRLR  314
             SQ YF PYPD+L LR
Sbjct  300  RSQNYFEPYPDTLGLR  315

123) N646_3192 in NC_022359


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  286 bits (1069),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 148/320 (47%), Positives = 226/320 (71%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSPYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+P   + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VSNE-ERVALVETKNPENDHTDNMLTYSANKVDELQSEQLCGYIVCAKSPTCGMERVKVY  119
            +      + +  +  P++D T+ M +++   +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SKNS--AAKEGVGLYTQTLMQKMPWLPVEEDGRLNDPVLKENFITRVFCLNDFYDSMDGE  177
              ++  + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+R+F L+++       
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVANYE-IEDFYQEYRLGLMKALTNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA + + + ++ F+  YR  LM  L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLTKEEKEELATVIHDYRIGMLPLLAPLTLIKHYLNTYPDEY  296
            SRKN+TNVLMH+QGYF R+L   ++ EL  VI +YR G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LSKQKFLEPYPQEMRLRYGL  316
            L  Q+++EPYP+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

124) O3Y_13743 in NC_016945


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  1    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  60
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  61   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  119
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  120  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  177
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  178  APSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  236
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  237  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  296
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  297  YLAQQRYLNPYPQELKLRYGL  317
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

125) VCLMA_B0047 in NC_017269


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  1    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  60
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  61   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  119
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  120  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  177
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  178  APSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  236
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  237  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  296
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  297  YLAQQRYLNPYPQELKLRYGL  317
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

126) VCM66_A0052 in NC_012580


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  6    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  65
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  66   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  124
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  125  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  182
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  183  APSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  241
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  242  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  301
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  302  YLAQQRYLNPYPQELKLRYGL  322
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

127) VCA0055 in NC_002506


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  6    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  65
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  66   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  124
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  125  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  182
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  183  APSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  241
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  242  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  301
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  302  YLAQQRYLNPYPQELKLRYGL  322
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

128) VC395_A0049 in NC_012583


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  6    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  65
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  66   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  124
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  125  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  182
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  183  APSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  241
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  242  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  301
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  302  YLAQQRYLNPYPQELKLRYGL  322
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

129) VC0395_0082 in NC_009456


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  285 bits (1065),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  6    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  65
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  66   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  124
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  125  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  182
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  183  APSAKKIVEFHSRYKLTLMAHNPQAYRALGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  241
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  242  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  301
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  302  YLAQQRYLNPYPQELKLRYGL  322
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

130) VCD_000183 in NC_012667


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  284 bits (1062),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  1    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  60
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  61   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  119
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  120  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  177
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  178  APSAKKIVEFHSRYKLTLMAHNPQAYRVLGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  236
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  237  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  296
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  297  YLAQQRYLNPYPQELKLRYGL  317
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

131) Vch1786_II0850 in NC_016446


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  284 bits (1062),  Expect = 6e-78, Method: Compositional matrix adjust.
 Identities = 163/321 (51%), Positives = 232/321 (73%), Gaps = 7/321 (2%)

Query  1    MQTTPLKIGISACLLGAKVRFDGGHKISHFVTNELDRYAEFVSVCPEMGMGLPVPRPTLR  60
            M+  P+ +GIS+CL GA VRFDGGHK  +FV N L     + ++CPE+++GLPVPRP+LR
Sbjct  1    MNNKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALR  59

Query  61   LISEN-ERIALVETKDSSRDHTAALESYSQQKVAELQHAELCGYIVCAKSPSCGMERVKV  119
            LI      I +  +  +  D T  +++++++ ++ +  +EL G+IVCAKSPSCGMERV++
Sbjct  60   LIQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRL  117

Query  120  YKHNGTE--KDGVGVYTRILMEKMPWLPIEEDGRLNDPVLRENYITRVFCLHDFYTSMGD  177
            Y ++G    K G G++T  +M+K PWLPIEEDGRL+DPVLREN+I+R+F LH++ +  ++
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  178  APSAKKIVEFHSRYKLTLMAHNPQAYRVLGRLVANVKQYP-LDSFIQEYRLGLMQALAHR  236
            + S   ++ FHSRYKL L+AH+  +YR +G +VA + +   LD+F+  YR  LM  L H 
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  237  ASRKNNTNVLMHLQGYFKRSLNKLQKAELAQVIESYRVGELPLLAPITLLKHYLALFPDA  296
            ASRKN+TNVLMH+QGYF R+LN  Q+AEL +VI +YR G LP+LAP+TLLKHYLA  PD 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  297  YLAQQRYLNPYPQELKLRYGL  317
            YL  Q Y++PYP+ L LR ++
Sbjct  298  YLRSQNYFEPYPDTLGLRLAI  318

132) N175_17725 in NC_022224


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  283 bits (1060),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 163/314 (52%), Positives = 228/314 (73%), Gaps = 6/314 (1%)

Query  35   IGISACVLGEQVRFDSGHKASDFVTKELTNYFSFIPVCPEVAIGLTVPRPAIRLISHE-E  93
            +GIS+C+ G  VRFD+GHK  DFV + L+   ++ P+CPEVAIGL VPRPA+RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  94   RLALVETKDETKDYTQAMFDFSERKVDELELMKLCGYIVCAKSPTCGMERVKVY--KHQR  151
             + +  +     D T+ M  F++R +  +    L G+IVCAKSP+CGMERV++Y  K +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  152  ADKEGVGLYTATLMRKMPWLPVEEDGRLHDPVLRENFITRVYCLHDFYQSIGDNPTPGKV  211
            + K G GL+TA++M K PWLP+EEDGRLHDPVLRENFI+R++ LH++    ++  +   +
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  212  VAFHSRYKLTLMAHHPQAYRELGRLVAEVKQ-HPPQYFIEHYRQGLMDALKHRASRKNNT  270
            +AFHSRYKL L+AHH  +YRE+G +VA + + +  + F+ +YR+ LM  L+H ASRKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  271  NVLMHIQGYFKRALNKEQKVELAQLIDDYRTGELPLLAPITLLKHYIKMYPDAYLQQQHY  330
            NVLMHIQGYF RALN  Q+ EL ++I +YR+G LP+LAP+TLLKHY+   PD YL+ Q+Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  331  LSPYPQTLRLRYGL  344
            + PYP+TL LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

133) VAA_02914 in NC_015637


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  283 bits (1060),  Expect = 1e-77, Method: Compositional matrix adjust.
 Identities = 163/314 (52%), Positives = 228/314 (73%), Gaps = 6/314 (1%)

Query  35   IGISACVLGEQVRFDSGHKASDFVTKELTNYFSFIPVCPEVAIGLTVPRPAIRLISHE-E  93
            +GIS+C+ G  VRFD+GHK  DFV + L+   ++ P+CPEVAIGL VPRPA+RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  94   RLALVETKDETKDYTQAMFDFSERKVDELELMKLCGYIVCAKSPTCGMERVKVY--KHQR  151
             + +  +     D T+ M  F++R +  +    L G+IVCAKSP+CGMERV++Y  K +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  152  ADKEGVGLYTATLMRKMPWLPVEEDGRLHDPVLRENFITRVYCLHDFYQSIGDNPTPGKV  211
            + K G GL+TA++M K PWLP+EEDGRLHDPVLRENFI+R++ LH++    ++  +   +
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  212  VAFHSRYKLTLMAHHPQAYRELGRLVAEVKQ-HPPQYFIEHYRQGLMDALKHRASRKNNT  270
            +AFHSRYKL L+AHH  +YRE+G +VA + + +  + F+ +YR+ LM  L+H ASRKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  271  NVLMHIQGYFKRALNKEQKVELAQLIDDYRTGELPLLAPITLLKHYIKMYPDAYLQQQHY  330
            NVLMHIQGYF RALN  Q+ EL ++I +YR+G LP+LAP+TLLKHY+   PD YL+ Q+Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  331  LSPYPQTLRLRYGL  344
            + PYP+TL LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

134) VV2_1541 in NC_004460


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  282 bits (1054),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 167/319 (53%), Positives = 237/319 (75%), Gaps = 6/319 (1%)

Query  3    SSKLKIGISACVLGDQVRFDGGHKQSRFVVQELMPHFSFVPVCPEVGMGMPVPRPTIRLI  62
            ++K  +GIS+C+ G  VRFDGGHK+  FV++ L P  ++ P+CPEV++G+PVPRP++RLI
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   SNE-ERIAMVETKNPDKDYTEQMLSYSEQQVDRLMAHSLSGYIVCAKSPTCGMEKVKVYK  121
                  I M  +  P+ D TE+M +++++ +  +    L+G+IVCAKSP+CGME+V++Y 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLYD  119

Query  122  THG--AEKEGVGLYTQTLMRKMPWLPVEEDGRLNDPVLRENFITRVYCLHDFNTNVLNQL  179
              G  + K G GL+T ++M K PWLP+EEDGRL+DPVLRENFI+R++ LH++N+   + L
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  180  SRKSIVEFHSRYKLTLMAHHPASYRSLGRMVASIAEY-DLQEFAYQYREGLMKALTHRAS  238
            SR S++ FHSRYKL L+AHH A+YR +G  VA + E  DL+ F  +YRE LM  L H AS
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  239  RKNNTNVLMHLQGYFKTALNKEQKSELAQVIHDYRTGllpllapltlIRHYLNTHPDGYL  298
            RKN+TNVLMH+QGYF  ALN  Q++EL +VI +YR+G LP+LAPLTL++HYL  HPD+YL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  299  ESQKFLKPYPQELKLRYGL  317
             SQ+++ PYP+ L LR ++
Sbjct  300  RSQNYFEPYPDTLGLRLAI  318

135) VVA0355 in NC_005140


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  281 bits (1052),  Expect = 4e-77, Method: Compositional matrix adjust.
 Identities = 166/314 (53%), Positives = 233/314 (75%), Gaps = 6/314 (1%)

Query  11   IGISACVLGDQVRFDGGHKQSRFVAQELMPHFSFVPVCPEVGMGMPVPRPTIRLISNE-E  69
            +GIS+C+ G  VRFDGGHK+  FV + L P  ++ P+CPEV++G+PVPRP++RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   RIAMVETKNPDKDYTEQMLSYSEQQVDRLMAHSLSGYIVCAKSPTCGMEKVKVYKAHG--  127
             I M  +  P+ D TE+M +++++ +  +    L+G+IVCAKSP+CGME+V++Y   G  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  128  AEKEGVGLYTQTLMRKMPWLPVEEDGRLNDPVLRENFITRVYCLHDFNTNVLNQLSRKSI  187
            + K G GL+T ++M K PWLP+EEDGRL+DPVLRENFI+R++ LH++N+   + LSR S+
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  188  VEFHSRYKLTLMAHHPASYRSLGRMVASIAEY-DLQEFAYQYREGLMKALTHRASRKNNT  246
            + FHSRYKL L+AHH A+YR +G  VA + E  DL+ F  +YRE LM  L H ASRKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  247  NVLMHLQGYFKTALNKEQKSELAQVIHDYRTGllpllapltlIRHYLNTHPDGYLESQKF  306
            NVLMH+QGYF  ALN  Q++EL +VI +YR+G LP+LAPLTL++HYL  HPD+YL SQ++
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  307  LKPYPQELKLRYGL  320
            + PYP+ L LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

136) GU3_12400 in NC_016745


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  280 bits (1049),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 163/312 (53%), Positives = 221/312 (71%), Gaps = 5/312 (1%)

Query  11   LGISGCLMGQKVRFDGGHKRSDFCTDELAKFVEFVPVCPEMAIGLGTPRPSIRLIG---G  67
            +GISGCL G  VRFDGGHKR DF  + LA  V + P+CPE+AIGL  PRP++RLI    G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   EGQVIAQTAKGLDVTEALRDYGRTMAAQFEGLSGYVLCAKSPSCGMERVRVYHESGQGNA  127
            + ++    A   DVTE +  ++    + +  L+G+++CAKSPSCGMERVR+Y+E G+   
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  128  KEGVGIYAAEIMQALPLLPCEEDGRLNDPVLRENFVTRIYALHDWQGLLHRGLTPSRLIA  187
            K G G+++A +M+  P LP EEDGRL+DPVLRENF++RI+ALH+ ++L  +GL+   L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  188  FHSRYKYLLMAHHRDSYQALGRLVADLSENPEQKA--EQYIHGLMSALSKRASRRGHTNV  245
            FHSRYK  L+AHH+ +Y+ +G +VA L E  +  A   +Y + LM+ L   ASR+ HTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHLQGYFKRQLTSRQRQELARTIHQYREGILPLLAPITLLRHYLEEHPNDYLRQQVYLD  305
            L H+QGYF R L SRQR EL   I  YR G LP+LAP+TLL+HYL EHP+DYLR Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALRLRYGI  317
            P P++L LR +I
Sbjct  307  PYPDTLGLRLAI  318

137) VVMO6_03311 in NC_014966


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  280 bits (1049),  Expect = 6e-77, Method: Compositional matrix adjust.
 Identities = 165/314 (53%), Positives = 234/314 (75%), Gaps = 6/314 (1%)

Query  8    IGISACVLGDQVRFDGGHKQSRFVVQELMPHFSFVPVCPEVGMGMSVPRPTIRLISNE-E  66
            +GIS+C+ G  VRFDGGHK+  FV++ L P  ++ P+CPEV++G++VPRP++RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  67   RIAMVETKNPDKDYTEQMLSYSEQQVDRLMAHSLSGYIVCAKSPTCGMEKVKVYKAHG--  124
             I M  +  P+ D TE+M +++++ +  +    L+G+IVCAKSP+CGME+V++Y   G  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  125  AEKEGVGLYTQTLMRKMPWLPVEEDGRLNDPVLRENFITRVYCLHDFNTNVLNQLSRKSI  184
            + K G GL+T ++M K PWLP+EEDGRL+DPVLRENFI+R++ LH++N+   + LSR S+
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  185  VEFHSRYKLTLMAHHPASYRSLGRMVASIAEY-DLQEFAYQYREGLMKALTHRASRKNNT  243
            + FHSRYKL L+AHH A+YR +G  VA + E  DL+ F  +YRE LM  L H ASRKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  244  NVLMHLQGYFKTALNKEQKSELAQVIHDYRTGllpllapltlIRHYLNTHPDGYLESQKF  303
            NVLMH+QGYF  ALN  Q++EL +VI +YR+G LP+LAPLTL++HYL  HPD+YL SQ++
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  304  LKPYPQELKLRYGL  317
            + PYP+ L LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

138) ybgA in NC_006841


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  278 bits (1039),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 149/314 (48%), Positives = 221/314 (71%), Gaps = 6/314 (1%)

Query  5    VGISSCVIGESVRFDGGHKSNKFASKVLSPYFNYIPICPEVGSGMSVPRPTIRLMTND-E  63
            VGIS+C+ G +VRFDGGHK   F  + L+P   Y PICPEV+ G++VPRP++RL+     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   RIALVDSKDSSIDYTDSMLEFSNKTVDALMDADLCGYIVCANSPSCGMERVKVYSK--NN  121
             I +  S  +  D T+ M  F+++ + ++  ++L G+IVCA+SPSCGMERV++Y    N 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  122  ATKNGVGLYTGTLMKKMPWLPVEEDGRLNDPVLKENFITRVFCLHDLYQSMDGQPTAGKI  181
            + K G GL+T+++M K PWLP+EEDGRL+DPVL+ENFI+R+F LH+L        +   +
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  182  VAFHSRYKYTLMSHSTVGYKNLGKLVARVAEYD-IHEFFNLYRTQLMQTMSIRATRKNNT  240
            +AFHSRYK  L++H   GY+++G +VAR+ E D ++ FF  YR +LM  +   A+RKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  241  NVLMHLQGYFKKDLDSPQKQALAELIQEYNQGLLPLLSPITLIKHHLSMHNNDYLKQQSF  300
            NVLMH+QGYF + L+S Q+  L E+I  Y  G LP+L+P+TL+KH L+ H +DYL+ Q++
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  301  LNPYPQELRLRYGL  314
            ++PYP+ L LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

139) VFMJ11_A0875 in NC_011186


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  278 bits (1040),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 150/314 (48%), Positives = 221/314 (71%), Gaps = 6/314 (1%)

Query  5    VGISSCVIGESVRFDGGHKSNKFASKVLSPYFNYIPICPEVGSGMSVPRPTIRLMTND-E  63
            VGIS+C+ G +VRFDGGHK   F  + L+P   Y PICPEV+ G++VPRP++RL+     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   RIALVDSKDSSIDYTDSMLEFSNKTVDALMDAELCGYIVCANSPSCGMERVKVYSK--NN  121
             I +  S  +  D T+ M  F+++ + ++  +EL G+IVCA+SPSCGMERV++Y    N 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  122  ATKNGVGLYTGTLMKKMPWLPVEEDGRLNDPVLKENFITRVFCLHDLYQSMDGQPTAGKI  181
            + K G GL+T+++M K PWLP+EEDGRL+DPVL+ENFI+R+F LH+L        +   +
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  182  VAFHSRYKYTLMSHSTVGYKNLGKLVARVAEYD-IHEFFNLYRTQLMQTMSIRATRKNNT  240
            +AFHSRYK  L++H   GY+++G +VAR+ E D ++ FF  YR +LM  +   A+RKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  241  NVLMHLQGYFKKDLDSPQKQALAELIQEYNQGLLPLLSPITLIKHHLSMHNNDYLKQQSF  300
            NVLMH+QGYF + L+S Q+  L E+I  Y  G LP+L+P+TL+KH L+ H +DYL+ Q++
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  301  LNPYPQELRLRYGL  314
            ++PYP+ L LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

140) M892_25650 in NC_022270


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  275 bits (1027),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 155/320 (49%), Positives = 231/320 (73%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKISNFVTKELDGYFSFVPVCPEVGVGMSVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L    ++ P+CPEV++G++VPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VSNE-ERIALVETKNPDNDHTENMLAYSENKVNELQGEQLCGYIVCAKSPTCGMERVKVY  119
            +      I +  +  P++D TE M A+++  +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENFITRIYCLNDFYESMGGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+RI+ L+++    +  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIVEFHSRYKLTLMAHHPESYRSLGRLVADVANY-EIDEFYSQYRLGLMQALQNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA + +  ++D F+ +YR  LM  L++ A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLTSDEKAELATVISDYRTGllpllapltlIKHYLNAYPDAY  296
            SRKN+TNVLMH+QGYF R+L S ++AEL  VI +YR+G LP+LAPLTL+KHYL   PD Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQKQKYLEPYPQEMRLRYGL  316
            L+ Q+Y+EPYP+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

141) VIBHAR_05120 in NC_009784


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  275 bits (1027),  Expect = 4e-75, Method: Compositional matrix adjust.
 Identities = 155/320 (49%), Positives = 231/320 (73%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKISNFVTKELDGYFSFVPVCPEVGVGMSVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L    ++ P+CPEV++G++VPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VSNE-ERIALVETKNPDNDHTENMLAYSENKVNELQGEQLCGYIVCAKSPTCGMERVKVY  119
            +      I +  +  P++D TE M A+++  +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENFITRIYCLNDFYESMGGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+RI+ L+++    +  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIVEFHSRYKLTLMAHHPESYRSLGRLVADVANY-EIDEFYSQYRLGLMQALQNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA + +  ++D F+ +YR  LM  L++ A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLTSDEKAELATVISDYRTGllpllapltlIKHYLNAYPDAY  296
            SRKN+TNVLMH+QGYF R+L S ++AEL  VI +YR+G LP+LAPLTL+KHYL   PD Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQKQKYLEPYPQEMRLRYGL  316
            L+ Q+Y+EPYP+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

142) vfu_B01063 in NC_016628


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  274 bits (1024),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 155/314 (50%), Positives = 224/314 (72%), Gaps = 6/314 (1%)

Query  8    VGVSACILGEKVRFDAGHKQSQFVTQELAPYFDFVSVCPEVGMGLPVPRPTIRLVSND-E  66
            VG+S+C+ G  VRFD+GHK+ +FV + LAP   + ++CPEV++GLPVPRP++RL+     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  67   RIALVETNNVSRDHTDALLAYSEHKVVELEQHQLRGYIVCAKSPTCGMERVKVYKQHG--  124
             I +  ++    D T+ + A++++ +  + +  L G+IVCAKSP+CGMERV++Y + G  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  125  AEKEGVGLYTQTLMRAMPWLPVEEDGRLNDPVLRENFITRVFCLDDFYRCLGDEPSAGKV  184
            + K G GL+T ++M   PWLP+EEDGRL+DPVLRENFI+R+F L+++    ++  S   +
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  185  VEFHSRYKLSLMAHHPLSYRALGRLVANVSHYQT-DEFIREYRLGLMQALSHRASRKNHT  243
            + FHSRYKL L+AHH  +YR +G +VA + + +  D F+  YR  LM  L H ASRKNHT
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  244  NVLMHLQGYFKRALDRRQKAELAQLIHDYRRGTLPLLAPLTLIKHYLSMYPDAYLSKQRY  303
            NVLMH+QGYF RAL+ RQ+AEL ++I +YR G LP+LAPLTL+KHYL+  PD YL  Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  304  LDPHPQELKLRYGL  317
            ++P P+ L LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

143) Fbal_1479 in NC_014541


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  273 bits (1023),  Expect = 7e-75, Method: Compositional matrix adjust.
 Identities = 155/313 (50%), Positives = 219/313 (70%), Gaps = 3/313 (0%)

Query  2    TMPKVGVSACIVGQEVRFDGGHKRSGFVDGPLKNIFDMKPLCPEMGMGLGTPRPTIRLRE  61
              P VG+S+C+ G  VRFDGGHKR +FV  +L      KP+CPE+++GL  PRP++RL +
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  62   IG-ESVRLM-DDKNHIDHTDAMQAFNERTLPNLAGLSGYIVCAKSPSCGMERVRVMNEQQ  119
                 +R+   +  H D T+ M+AF +R LP ++ L+G+IVCAKSPSCGMERVR+ +E+ 
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  120  NGARHNGRGLFTAALMEAYPLLPVEEDGRLNDIPLRENFITRVFVYHAYQELVASEPGEH  179
            N +R  G GLFTAA+M+ YP LP+EEDGRL+D  LRENFI+R+F  H  + L A   + H
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  180  QLLAFHRRHKLLLMAHNQATYRELGRYIAISRER-PMAERLAYYGERMMHALAKPASRRN  238
             LLAFH R KL L+AH+QA YRE+G ++A  +E+  +   +  Y E++M  L  PASR+N
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  239  HTNVLQHIGGYFKRELDTTERQHLHETILAYHDGQLPLMAPITLLQSLLKRYPKPYIEEQ  298
            HTNVL HI GYF R L++ +R +L+E IL+Y+ G+LP++AP+TLL+  L   P  Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  299  HYLQPHPQHLALR  311
            +Y++P P+ L+LR
Sbjct  303  NYFEPYPDTLGLR  315

144) VSAL_II0865 in NC_011313


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  272 bits (1016),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 148/314 (48%), Positives = 216/314 (69%), Gaps = 6/314 (1%)

Query  5    VGISSCVNGESVRFDGGHKSNKFASKVLAPYFTYVPICPEVGSGMSVPRPTIRLVTNE-E  63
            VGIS+C+ G +VRFDGGHK   F  + LAP  +Y PICPEV+ G++VPRP++RL+     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   RIALVDSKNASLDYTDSMIQFSQKTVNRLKETEMCGYIVCANSPSCGMERVKVYSKNS--  121
             I +  S  +  D T+ M  F+++ +  +   E+ G+IVCA+SPSCGMERV++Y  ++  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  122  ATKNGVGLYTQILMKEMPWLPVEEDGRLSDPVLKENFITRVFCLNDLYKSMDGNPTPGKI  181
            + K G GL+T  +M   PWLP+EEDGRL DPVL+ENFI+R+F L++L        +   +
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  182  IAFHSRYKYTLMSHSTVGYRELGKLVAKVADYD-IHEFFAIYRTQLMQTMSIRASRKNNT  240
            +AFHSRYK  L++H   GYRE+G +VA++ + D ++ FF  YR +LM  +   ASRKN+T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  241  NVLMHLQGYFKKELESPQKKELALVIQEYNQGLLPLLSPITLIKHHLGIHTNEYLAKQSF  300
            NVLMH+QGYF + L+S Q+ EL  VI  Y  G LP+L+P+TL+KH L+ H ++YL  Q++
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  301  LNPYPQELRLRYGL  314
            ++PYP+ L LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

145) VEA_001250 in NC_013457


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  268 bits (1003),  Expect = 3e-73, Method: Compositional matrix adjust.
 Identities = 152/320 (48%), Positives = 224/320 (70%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSPYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+P   + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   ISEE-ERVALVETKNPENDHTDNMLAYSANKVEELQSEQLCGYIVCAKSPTCGMERVKVY  119
            I      + +  +  P++D T+ M A++   +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGVGLYTQTLMKKMPWLPVEEDGRLNDPVLKENFITRVFCLNDFYDSMDGE  177
                N + K G GL+T ++M K PWLP+EEDGRL+DPVL+ENFI+R+F L+++       
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKVIDFHSRYKLTLMAHHPESYRSLGRLVADVASY-EIEEFYQEYRLGLMKALANRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA +    +++ F+  YR  LM  L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRALTKDEKEELATVIHDYRTGtlpllapltlIKHYLNTYPDEY  296
            SRKN+TNVLMH+QGYF RAL   ++ EL  VI +YR+G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LAKQKFLEPYPQEMRLRYGL  316
            L  Q+++EPYP+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

146) M636_06215 in NC_021822


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  267 bits (1000),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 152/320 (48%), Positives = 228/320 (72%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+    + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   ISNE-ERIALVETKNPDNDHTDNMLTYSANKVDELQNEQLCGYIVCAKSPTCGMERVKVY  119
            I      I +  +  P++D T+ M +++   +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGIGLYTKTLMEKMPWLPVEEDGRLNDPVLKENFITRIYCLNDFYESMAGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+RI+ L+++    A  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVANY-EIDEFYREYRLGLMTALSNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA + +  ++D F+  YR  LM+ L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLNKDEKEELATVIQDYRTGtlpllapltlIKHYLNAYPDEY  296
            SRKN+TNVLMH+QGYF R+LN  ++ EL  VI +YR+G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQKQKFLEPHPQEMRLRYGL  316
            L+ Q+++EP P+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

147) M634_16835 in NC_021821


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  267 bits (1000),  Expect = 5e-73, Method: Compositional matrix adjust.
 Identities = 152/320 (48%), Positives = 228/320 (72%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+    + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   ISNE-ERIALVETKNPDNDHTDNMLTYSANKVDELQNEQLCGYIVCAKSPTCGMERVKVY  119
            I      I +  +  P++D T+ M +++   +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENFITRIYCLNDFYGSMAGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+RI+ L+++ +  A  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVASY-EIDEFYREYRLGLMTALSNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA +    ++D F+  YR  LM+ L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLNKDEKEELATVIQDYRTGtlpllapltlIKHYLNAYPDEY  296
            SRKN+TNVLMH+QGYF R+LN  ++ EL  VI +YR+G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQKQKFLEPHPQEMRLRYGL  316
            L+ Q+++EP P+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

148) VPBB_A1346 in NC_019971


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  267 bits (998),  Expect = 6e-73, Method: Compositional matrix adjust.
 Identities = 152/320 (48%), Positives = 227/320 (71%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+    + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   ISNE-ERIALVETKNPDNDHTDNMLTYSANKVDELQNEQLCGYIVCAKSPTCGMERVKVY  119
            I      I +  +  P++D T+ M +++   +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENFITRIYCLNDFYESMAGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+RI+ L+++    A  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVASY-EIDEFYREYRLGLMTALSNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA +    ++D F+  YR  LM+ L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLNKDEKEELATVIQDYRTGtlpllapltlIKHYLNAYPDEY  296
            SRKN+TNVLMH+QGYF R+LN  ++ EL  VI +YR+G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQKQKFLEPHPQEMRLRYGL  316
            L+ Q+++EP P+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

149) VPA1473 in NC_004605


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  267 bits (997),  Expect = 7e-73, Method: Compositional matrix adjust.
 Identities = 152/320 (48%), Positives = 227/320 (71%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+    + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   ISNE-ERIALVETKNPDNDHTDNMLTYSANKVDELQNEQLCGYIVCAKSPTCGMERVKVY  119
            I      I +  +  P++D T+ M +++   +  +   +L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTI--GELAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNAAKEGVGLYTKTLMEKMPWLPVEEDGRLNDPVLKENFITRIYCLNDFYESMAGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+RI+ L+++    A  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIIDFHSRYKLTLMAHHPESYRSLGRLVADVASY-EIDEFYREYRLGLMTALSNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA +    ++D F+  YR  LM+ L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRSLNKDEKEELATVIQDYRTGtlpllapltlIKHYLNAYPDEY  296
            SRKN+TNVLMH+QGYF R+LN  ++ EL  VI +YR+G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQRQKFLEPHPQEMRLRYGL  316
            L+ Q+++EP P+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

150) VEJY3_23371 in NC_016614


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  266 bits (996),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 151/320 (48%), Positives = 227/320 (71%), Gaps = 6/320 (1%)

Query  1    MESSIKVGISSCVLGERVRFDSGHKVSNFVTKELSNYFDFVSVCPEVGVGMPVPRPTIRL  60
            M++   VGIS+C+ G  VRFD+GHK  +FV + L+    + ++CPEV++G+PVPRP++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   ISDA-ERVALVETKNPENDHTDNMLAYSANKVDELQEQQLCGYIVCAKSPTCGMERVKVY  119
            I  +   + +  +  P++D T+ M A++   +  + E  L G+IVCAKSP+CGMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLY  118

Query  120  SK--NNASKEGVGLYTQTLMQKMPWLPVEEDGRLNDPVLKENFITRVYCLNDFYQSMAGE  177
                N + K G GL+T ++M+K PWLP+EEDGRL+DPVL+ENFI+R++ L+++    A  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PTRGKIIDFHSRYKLTLMAHHPESYRALGRLVAEVANY-EIEDFYAGYRLGLMKALSNRA  236
             +R  ++ FHSRYKL L+AHH  +YR +G +VA + +  +++ F+  YR  LM  L + A
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  SRKNNTNVLMHLQGYFKRALTKDEKEELATVIHDYRTGllpllapltlIKHYLNTYPDEY  296
            SRKN+TNVLMH+QGYF RAL   ++ EL  VI +YR+G LP+LAPLTL+KHYL   PD+Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LQKQKFLEPHPQEMRLRYGL  316
            L+ Q+++EP P+ + LR ++
Sbjct  299  LRSQNYFEPYPDTLGLRLAI  318

151) Sama_0810 in NC_008700


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  266 bits (996),  Expect = 1e-72, Method: Compositional matrix adjust.
 Identities = 148/316 (47%), Positives = 228/316 (73%), Gaps = 7/316 (2%)

Query  7    DRIQIGISACLLGEQVRFDGGHKNSAYCQQELKPHFDFVPVCPEMAIGLGAPRKSIRQVR  66
            ++  +GIS+CL G  VRFDGGHK   +  + L P   + P+CPE+AIGL  PR ++R ++
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  67   IE-GEIRVRSADGS-IDVTEQLQSFCNNKADGLGFLGGYLFCSKSPTCGMERVPVYKADG  124
               G+IR+R ++++  DVTE++++F +     +G L+G++ C+KSP+CGMERV +Y   G
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  125  SGGFKEGVGVFAAALMKRFPHLPVEEEGRLHDLVIRENFFTRVYAYHDWHCMRLKGLTRK  184
            + G K G G+F+AA+M ++P LP+EE+GRLHD V+RENF++R++A H+ + +R +GL+R 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  185  ALTDFHARYKYLLLSHSPAIYRTLGPLLAGDGELEAVADSYF----DGFMTALRHKASRR  240
            +L  FH+RYK  LL+H  A YR +GP++A   E + + D++F    + +M+ LRH ASR+
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDL-DAFFVRYREKLMAILRHPASRK  241

Query  241  NHTSALQHIQGYFKKFLSGSQKAELSDAILAYRQGVQPLLVPITLIRHYLREHPNDYIAA  300
            NHT+ L HIQGYF + L++ Q+AEL + IL+YR G  P+L P+TL++HYL EHP+DY+ +
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  301  QVYLNPHPDSLRLRYA  316
            Q Y++P PD+L LR A
Sbjct  302  QNYFEPYPDTLGLRLA  317

152) K734_06980 in NC_021286


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 154/313 (50%), Positives = 220/313 (71%), Gaps = 8/313 (2%)

Query  6    VGISSCLMGDEVRFDGGHKKSAFCVDELSRHIELVRFCPEVGIGMPVPRPTIRLEQH--D  63
            VGIS+CL G  VRFDGGHK+  F ++ L+  +    +CPEV+IG+PVPRP++RL Q   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   DVQAVVPKTG-ENVTSQLAAFADKVQVKVEQLSGYILCAKSPSCGIERVKLYDPETGHEQ  122
            D++   + +  ++VT ++ AFAD+    + +L+G+I+CAKSPSCG+ERV+LYD    + +
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  123  KAGMGIFAARLKEKNPALPLEEDGRLNDPHLRENFVMRVYVFSQWKEM-TQKLSKHQLLQ  181
            KAG G+F+A + +K P LP+EEDGRL+DP LRENF+ R++ + + + + +Q LS+H LL 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  182  FHQRCKLLLLAHNQQRYRELG---KRLGEQESIDSAFAEQYIIDVMDALSKPASRKNHTN  238
            FH R KL LLAH+Q  YRE+G    RL E + +D+ F  +Y   +M  L  PASRKNHTN
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFV-RYREKLMAILRHPASRKNHTN  245

Query  239  VLQHIQGYFKADLAHERREELSDIILQYHDGILPLMSPLTLIRHYLREFPKEYLEGQWYL  298
            VL HIQGYF   L   +R EL ++IL Y+ G LP+++PLTL++HYL E P +YL +Q Y+
Sbjct  246  VLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYF  305

Query  299  TPYPDDLKLRYGL  311
             PYPD L LR ++
Sbjct  306  EPYPDTLGLRLAI  318

153) IL1389 in NC_006512


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  266 bits (993),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 154/313 (50%), Positives = 220/313 (71%), Gaps = 8/313 (2%)

Query  6    VGISSCLMGDEVRFDGGHKKSAFCVDELSRHIELVRFCPEVGIGMPVPRPTIRLEQH--D  63
            VGIS+CL G  VRFDGGHK+  F ++ L+  +    +CPEV+IG+PVPRP++RL Q   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   DVQAVVPKTG-ENVTSQLAAFADKVQVKVEQLSGYILCAKSPSCGIERVKLYDPETGHEQ  122
            D++   + +  ++VT ++ AFAD+    + +L+G+I+CAKSPSCG+ERV+LYD    + +
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  123  KAGMGIFAARLKEKNPALPLEEDGRLNDPHLRENFVMRVYVFSQWKEM-TQKLSKHQLLQ  181
            KAG G+F+A + +K P LP+EEDGRL+DP LRENF+ R++ + + + + +Q LS+H LL 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  182  FHQRCKLLLLAHNQQRYRELG---KRLGEQESIDSAFAEQYIIDVMDALSKPASRKNHTN  238
            FH R KL LLAH+Q  YRE+G    RL E + +D+ F  +Y   +M  L  PASRKNHTN
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFV-RYREKLMAILRHPASRKNHTN  245

Query  239  VLQHIQGYFKADLAHERREELSDIILQYHDGILPLMSPLTLIRHYLREFPKEYLEGQWYL  298
            VL HIQGYF   L   +R EL ++IL Y+ G LP+++PLTL++HYL E P +YL +Q Y+
Sbjct  246  VLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYF  305

Query  299  TPYPDDLKLRYGL  311
             PYPD L LR ++
Sbjct  306  EPYPDTLGLRLAI  318

154) B565_3114 in NC_015424


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  263 bits (982),  Expect = 1e-71, Method: Compositional matrix adjust.
 Identities = 149/312 (48%), Positives = 220/312 (71%), Gaps = 2/312 (0%)

Query  6    VGISACLLGQEVRFDGGHKRSSFCERDLGAHFDYHPVCPEMAIGLGAPRAAIRLVKRN-G  64
            VGIS+CL G  VRFDGGHKR  F    L++   Y P+CPE+AIGL  PR+A+RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  65   EIRAEASNGSFD-VTEKLIAFSEQKARQLDFISGYILCAKSPSCGMERVKVYGANNEGSA  123
            +IR   S+++ D VTE++ AF+++    ++ ++G+I+CAKSPSCGMERV++Y+ + + + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  124  KEGIGLFAKALMEANPLLPVEEDGRLCDPILRENFVLRVFAYHDWQQLCARGITASALIR  183
            K G GLF+ A+M+  P LP+EEDGRL DP+LRENF+ R+FA H+ + L A+G++  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  184  FHSRYKYLVLSHATTHYRILGKLLGNLGKSTNLQEVADNYIKGLMTALTLRANRRSHTNV  243
            FHSRYK  +L+H  + YR +G +++ L    +L+     Y   LM+ L   A+R++HTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  244  LMHLQGYFKRVLTPAQKQELADTIDKYRTGIFPLLVPLTLIRHYLREYPNPYLAEQVYLN  303
            LMH+QGYF R L + Q+ EL + I  YR+G +P+L PLTL++HYL E P+ YL  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  304  PHPDTLKLRYGL  315
            P PDTL LR ++
Sbjct  307  PYPDTLGLRLAI  318

155) Shew185_3070 in NC_009665


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  262 bits (979),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 145/311 (47%), Positives = 217/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   EIILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +I +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

156) Sput200_2853 in NC_017566


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  262 bits (980),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 146/311 (47%), Positives = 217/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIKNFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDRLNAYSESKVQELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGT  128
            +  +  S     DVT+R+NA+++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHQMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIIANI---DDLETSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH    YRE+GP++A +   DDL++   RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYRQGLLPLLVPITLINHYLREFPTPYIEDQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

157) Sputcn32_2716 in NC_009438


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  262 bits (979),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 146/311 (47%), Positives = 217/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIKNFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDRLNAYSESKVQELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGT  128
            +  +  S     DVT+R+NA+++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHQMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIIANI---DDLETSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH    YRE+GP++A +   DDL++   RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYRQGFLPLLVPITLINHYLREFPTPYIEDQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

158) Sputw3181_1296 in NC_008750


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  262 bits (979),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 146/311 (47%), Positives = 217/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIKNFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDRLNAYSESKVQELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGT  128
            +  +  S     DVT+R+NA+++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHQMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIIANI---DDLETSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH    YRE+GP++A +   DDL++   RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYRQGFLPLLVPITLINHYLREFPTPYIEDQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

159) Sbal175_1290 in NC_017571


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 144/311 (47%), Positives = 216/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +  +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

160) Sbal117_3197 in NC_017579


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 144/311 (47%), Positives = 216/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +  +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

161) Sbal_3056 in NC_009052


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 144/311 (47%), Positives = 216/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +  +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

162) Sbal195_3213 in NC_009997


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 144/311 (47%), Positives = 216/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +  +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

163) Sbal678_3219 in NC_016901


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 144/311 (47%), Positives = 216/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +  +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

164) Sbal223_1307 in NC_011663


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  261 bits (974),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 143/311 (46%), Positives = 216/311 (70%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRD--G  68
            +GIS+CL G  VRFDGGHK   +  + +     Y PICPE+AIGL  PR ++RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   ETILVQSGDGSLDVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMDRVTEYKIGTNNGS  128
            +  +  S     DVT+++N +++  +  ++ L+G+++CAKSP+CGM+RV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPLLPVEEEGRLHDMVLRENFFTRVYAYHDWHLMKHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + ++ +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPTWYRELGPIVANI---EDLEQSATRYFEGFMTALKINATRKNHTST  245
            FHSRYK  L+AH  + YRE+GP+VA +   +DL+    RY E +M+ L+  A+RKNHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEDQVYLN  305
            L HIQGYF + L+  Q++EL E I+ YR G LP+L P+TL++HYL E P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEALKLRYA  316
            P P++L LR A
Sbjct  307  PYPDTLGLRLA  317

165) Shew_1478 in NC_009092


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 146/315 (47%), Positives = 215/315 (69%), Gaps = 4/315 (1%)

Query  1    MKKKLKIGISACVMGEPVRFDRGHKKSGFCMEQLAEFAEFKPVCPEMAIGLPVPRPTIR-  59
            M++K  +GIS+C+ G  VRFD GHK+ +F M+ LA    +KP+CPE+AIGLPVPRP++R 
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  60   -QIVRDNIITVSRPDGSGDVTQALKEFGAKAALNYQELAGFVFCAKSPSCGMERVKVYHH  118
             Q   ++I         +DVT+ ++ F+ +      ELAGF+ CAKSPSCGMERV++Y++
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  119  HGKGSESTGVGIFAEQVMKANPLLPCEENGRLNDPIIRENFTTRIFTYQKWLDLKAEGLT  178
             G+ +  +G G+F+  +M   P LP EE+GRL+DP++RENF +RIF+ +    L+A+GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  179  RHKLIQFHSAHKYLVMSHHVESYRELGRLLGRADI--GLEEQSERYISGLMQALKHKASR  236
            RH L+ FHS  K  +++HH  +YRE+G +++R +   +L+    RY   LM  L+H ASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  237  RSHTNTLQHLQGYFKRQLDEHKRRELTQEIAAYREGLSPLLVPLTLIKHYLIEFPNEYLL  296
            ++HTN L H+QGYF R L+ ++R EL + I +YR G  P+L PLTL+KHYL E P++YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  297  QQAYLNPHPKELRLR  311
             Q Y++P P  L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

166) Shewmr7_1234 in NC_008322


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  260 bits (970),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 144/311 (47%), Positives = 220/311 (71%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIAPFFDYVPLCPEMAIGLGAPRKSIRLVRDG-E  69
            +GIS+CL G  VRFDGGHK   +  + +AP   Y P+CPE+AIGL  PR ++RL++    
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   QIRVQSGDGSLD-VTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEYKIGTNNGT  128
            +IR++ ++++ D VT+++N F+++ +  +G L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPYLPVEEEGRLHDMVLRENFFTRVYAYHDWHKMCHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + +  +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIVANIEDLDQTAE---RYFAGFMTALKINATRRNHTST  245
            FHSRYK  L+AH    YRE+GP+VA +++ D+      RY   +M+ L+  A+R+NHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLN  305
            L HIQGYF + LN  Q+ EL E+I+ YR G LP+L P+TL++HYL + P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEELKLRYA  316
            P P+ L LR A
Sbjct  307  PYPDTLGLRLA  317

167) SO_3386 in NC_004347


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  260 bits (973),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 146/312 (47%), Positives = 220/312 (71%), Gaps = 7/312 (2%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIASFFDYVPICPEMAIGLGAPRKSIRLVRDG-E  69
            +GIS+CL G  VRFDGGHK   +  + +A+   Y PICPE+AIGL  PR ++RL++    
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   QIRVQSGDGSLD-VTEKLNDFSERKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGS  128
            +IR++ ++++ D VTE++N F++R +  ++ L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPHLPVEEEGRLHDMVLRENFFTRVYAYHDWHKMRHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + +R +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIVANIEDIEATADCYFTGF----MAALKINATRKNHTS  244
            FHSRYK  L+AH    YRE+GP+VA +++ +   D +F  +    MA L+  A+RKNHT+
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDL-DAFFVRYREKLMAILRHPASRKNHTN  245

Query  245  TLQHIQGYFKKHLTKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYL  304
             L HIQGYF + L   Q+ EL E+I+ YR G LP+L P+TL++HYL + P  Y+  Q Y+
Sbjct  246  VLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYF  305

Query  305  NPHPEELKLRYA  316
            +P P+ L LR A
Sbjct  306  EPYPDTLGLRLA  317

168) Tola_1113 in NC_012691


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  259 bits (969),  Expect = 1e-70, Method: Compositional matrix adjust.
 Identities = 150/312 (49%), Positives = 228/312 (74%), Gaps = 5/312 (1%)

Query  11   VGISACLLGQQVRFDGGHKRSEFVEKELSRYFSFISVCPELAIGLGVPRKAIRLVKRD-D  69
            VGIS+CL G  VRFDGGHKR +FV + L+   ++ ++CPE+AIGL VPR A+RL++   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   AIHVEASDGSFD-VTEKLMEYSHKKTAEFDYLAGYIVCAKSPSCGMERVKVYSPQG--AV  126
             I++  S+++ D VTE++  ++++  + ++ LAG+IVCAKSPSCGMERV++Y  +G  + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  127  KEGIGVYTRILMAQNPLLPVEEDGRLCDPVLRENFVTRVFAYHDWLSLKASGITRGKLIA  186
            K G G++T  +M + P LP+EEDGRL DPVLRENF++R+FA H+  +L+A G++R  L+A
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  187  FHSRYKYLLFAHQPSAYKALGKLLGDAVE-VPLEQLSSRYISGLMQGLQQRVSRKNHTNV  245
            FHSRYK  L+AH+ ++Y+ +G +++   E   L+ +  RY   LM  L++  SRKNHTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHLQGYFKKQLTPSQKAELQNTIDKYRRGVVPLMSPMTLLQHYLREYPNPYLASQVYLN  305
            L H+QGYF + L + Q+AEL++ I  YR G +P+++P+TLL+HYL E P+ YL SQ Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEDLALRYSL  317
            P P+ L+LR ++
Sbjct  307  PYPDTLGLRLAI  318

169) Shewmr4_1163 in NC_008321


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  258 bits (964),  Expect = 3e-70, Method: Compositional matrix adjust.
 Identities = 143/311 (46%), Positives = 219/311 (71%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIAPFFDYVPLCPEMAIGLGAPRKSIRLVRDG-E  69
            +GIS+CL G  VRFDGGHK   +  + +AP   Y P+CPE+AIGL  PR ++RL++    
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   QIRVQSGDGSLD-VTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMKRVTEYKIGTNNGT  128
            +IR++ ++++ D VT+++N F+++ +  +G L+G+++CAKSP+CGM RV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPYLPVEEEGRLHDMVLRENFFTRVYAYHDWHKMCHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + +  +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIVANIEDLDQTAE---RYFAGFMTALKINATRRNHTST  245
            FHSRYK  L+AH    YRE+GP+VA +++ D+      RY   +M+ L+  A+R+NHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLN  305
            L HIQGYF + LN  Q+ EL E+I+ YR G LP+L P+TL++HYL + P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEELKLRYA  316
            P P+ L LR A
Sbjct  307  PYPDTLGLRLA  317

170) PSM_B0528 in NC_014800


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  257 bits (961),  Expect = 5e-70, Method: Compositional matrix adjust.
 Identities = 139/313 (45%), Positives = 215/313 (69%), Gaps = 4/313 (1%)

Query  8    IGISACLAGEKVRFDSGHKKSNFCMEELAKHVEYKMYCPEVAVGLPIPRPTIRQVRTA-D  66
            +GIS+CL+G  VRFD+GHK+ +F M+ LA  V YK  CPEVA+GLP+PRP++R ++T+ +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  67   TIKV-CRPDGTGDVGPQLTEYGKKIATEQAGHLSGFVFCAKSPSCGMERVKIYNEAGTGN  125
             I++       +DV  ++  ++ ++     G+L+GF+ CAKSPSCGMERV++Y+E G   
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPT-IGELAGFIVCAKSPSCGMERVRLYDEKGNRG  125

Query  126  TSEGIGFFAEQIMKHNPLLPCEENGRLNDVHLRENFVMRVYTLYNWQQLVKEPITVHRLT  185
               G G+F+  +M   P LP EE+GRL+D  LRENF+ R+++L + + L  + ++ H L 
Sbjct  126  RKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLL  185

Query  186  QFHAQYKYLLMAHNYQAYRDLGHLLGTYLG-DDINALADEYILGLMTALKRPASRKNNSN  244
             FH++YK  L+AH+  +YR++G +++     DD++A+   Y   LM+ L++PASRKN++N
Sbjct  186  AFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTN  245

Query  245  TLMHLQGYFKRDLSKIEKEEMRDAIDEYRQGLVPLYVPLTLLKHHLKVHPNEYLSKQIYF  304
             LMH+QGYF R L+  ++ E+R+ I  YR G +P+  PLTLLKH L  HP++YL  Q YF
Sbjct  246  VLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYF  305

Query  305  NPYPNELKLRYGL  317
            +PYP+ L LR ++
Sbjct  306  EPYPDTLGLRLAI  318

171) Shewana3_1164 in NC_008577


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  256 bits (955),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 143/311 (46%), Positives = 218/311 (71%), Gaps = 5/311 (1%)

Query  11   IGISACLLGEKVRFDGGHKNSSYCNQEIAPFFNYVPLCPEMAIGLGAPRKSIRLVRDG-E  69
            +GIS+CL G  VRFDGGHK   +  + +AP   Y P+CPE+AIGL  PR ++RL++    
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   LIRVQSGDGSLD-VTDKLNRFSEQKVEELGFLGGYLLCAKSPTCGMERVTEYKIGTNNGT  128
             IR++ ++++ D VT+++N F+++ +  +G L+G+++CAKSP+CGMERV  Y    N G 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  129  KSGIGVFARKLMERYPYLPVEEEGRLHDMVLRENFFTRVYAYHDWHRMCHEGLTKHKLVK  188
            K+G G+F+  +M++YP LP+EE+GRLHD VLRENF++R++A H+ + +  +GL++H L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  189  FHSRYKYLLMAHSPKWYRELGPIVANIEDLAQTAE---RYFAGFMTALKINATRRNHTST  245
            FHSRYK  L+AH    YRE+GP+VA +++  +      RY   +M+ L+  A+R+NHT+ 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  246  LQHIQGYFKKHLNKEQKLELSEMIMKYRQGLLPLLVPITLINHYLRQFPTPYIEDQVYLN  305
            L HIQGYF + LN  Q+ EL E+I+ YR G LP+L P+TL++HYL + P  Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  306  PHPEELKLRYA  316
            P P+ L LR A
Sbjct  307  PYPDTLGLRLA  317

172) CPS_1379 in NC_003910


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  255 bits (954),  Expect = 2e-69, Method: Compositional matrix adjust.
 Identities = 142/309 (46%), Positives = 215/309 (70%), Gaps = 4/309 (1%)

Query  12   IGISACLIGEKVRFDASNKPSHFCIKEFSEHVSYKSFCPEVAVGLPIPRPTIRQIKR--D  69
            +GIS+CL G  VRFD+++K  +F ++ ++  V+YK++CPEVA+GLP+PRP++R I+   +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  70   DVIHVSQKDGSGDVTEALKAYGKKVASMTKSLSGYIFCAKSPSCGMERVKIYSPEGNSLP  129
            D+         +DVTE ++A++ +  +    L+G+I CAKSPSCGMERV++Y   GN   
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  130  SKGIGAFAKEIMDANPLLPCEENGRLNDPLLRENFVARVFAYKHWQTIVESGLTKHKLTT  189
              G G F+  +MD  P LP EE+GRL+DP+LRENF+AR+FA  + +++   GL++H L +
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  190  FHSHYKYTVMSHDLIAYKELGQLLARADL--PLDEVAAQYILGLMTALKIIATRKKHANT  247
            FHS+YK  +++H+  +Y+E+G ++AR +    LD    +Y   LM+ L+  A+RK+H+N 
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  248  LAHIQGYFSKHLQANERQELCEQIDAYREGLIPLMAPLTLIKHYLLNHPKDYLTKQAYLS  307
            L HIQGYF + L++ +R EL E I +YR G +P++APLTL+KHYL +HP DYL  Q Y+ 
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  308  PYPDKLRLR  316
            PYPD L LR
Sbjct  307  PYPDTLGLR  315

173) ASA_3232 in NC_009348


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  252 bits (940),  Expect = 2e-68, Method: Compositional matrix adjust.
 Identities = 149/314 (48%), Positives = 218/314 (70%), Gaps = 7/314 (2%)

Query  6    VGISACLLGQEVRFDGGHKRSSFCERDLGAHFDYHPVCPEMAIGLGSPRAAIRLVKRN-G  64
            VGIS+CL G  VRFDGGHKR  F    L++   Y P+CPE+AIGL  PR+A+RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  65   EIRAEASNGSFD-VTEQLIAFSEQKARQLDFISGYILCAKSPSCGMERVRIYGANNEGSA  123
            +IR   S+++ D VTE++ AF+++    ++ ++G+I+CAKSPSCGMERVR+Y+ + + + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  124  KEGIGLFAKALMEANPLLPVEEDGRLCDPILRENFVLRVFAYHDWQQLCAQGLTAAALIR  183
            K G GLF+ A+M+  P LP+EEDGRL DP+LRENF+ R+FA H+ + L AQGL+  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  184  FHSRYKYLVLSHATTHYRAlgkllgnlgkvnlQEVADSYIK---GLMTALTLRANRRSHT  240
            FHSRYK  +L+H  + YR            + +++   +++    LM+ L   A+R++HT
Sbjct  187  FHSRYKLQLLAHHQAGYRE--IGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  241  NVLMHLQGYFKRVLTPSQKQELAETIDKYRTGIFPLLVPLTLIRHYLREYPNPYLSGQVY  300
            NVLMH+QGYF R L + Q+ EL E I  YR+G +P+L PLTL++HYL E P+ YL +Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  301  LNPHPDTLKLRYGL  314
            ++P PDTL LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

174) PSHAb0452 in NC_007482


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  251 bits (937),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 138/313 (45%), Positives = 207/313 (67%), Gaps = 4/313 (1%)

Query  8    IGISACLAGEKVRFDTGHKRSNFCMDEFAKHVEYTRFCPEVAVGLPIPRPTIRQVRV--G  65
            +GIS+CL+G  VRFD GHKR +F M+ +A  V Y  +CPEVA+GLP+PRP++R ++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  66   DTIKVCRPDGSGDVGPQLTAYGIKVATEQAKELSGFVFCAKSPSCGMERIKIYNEAGTGN  125
            D          +DV  ++ A++ +     + EL+GF+ CAKSPSCGMER+++Y+E G   
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG-ELAGFIVCAKSPSCGMERVRLYDEKGNRG  125

Query  126  TSEGVGFFAEQIMKHNPLLPCEENGRLNDMHLRENFVMRVYTFKNWQKLIQQPLNVHRLT  185
               G G+F+  +M   P LP EE+GRL+D  LRENF+ R++++ + + L  Q L+ H L 
Sbjct  126  RKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLL  185

Query  186  QFHAQYKYLLMAHNYQAYRDLGHLLGTFLG-DDVTELADKYILGLMNGLKKPASRKNNCN  244
             FH++YK  L+AH+  +YR++G +++ +   DD+  +  +Y   LM  L+ PASRKN+ N
Sbjct  186  AFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTN  245

Query  245  TLMHLQGYFKKDLSSVEKQEMREAIDEYSDGLVPLYVPLTLLKHHLKVHPNEYLEKQVFF  304
             LMH+QGYF + L+S ++ E+RE I  Y  G +P+  PLTLLKH L  HP++YL  Q +F
Sbjct  246  VLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYF  305

Query  305  NPYPNELKLRYGI  317
            +PYP+ L LR +I
Sbjct  306  EPYPDTLGLRLAI  318

175) VS_II1450 in NC_011744


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  251 bits (938),  Expect = 4e-68, Method: Compositional matrix adjust.
 Identities = 134/315 (43%), Positives = 219/315 (70%), Gaps = 3/315 (0%)

Query  1    MDKKIKIGISACVAGHKVRFDTGHKRSRFCTDDLADYVELEPVCPEMGVGLPSPRPTIRQ  60
            M++K  +GIS+C++G  VRFD GHKR  F  + LA  V   P+CPE+++GLP PRP++R 
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   TRMLDDIIHVSRPDGS-GDVTNELIEFGQNYSKNNQHIAGFIVCQKSPTCGMERVKVYHH  119
             +   + I++  ++++ +DVT+ +  F++ +     ++AGFIVC KSP+CGMERV++Y++
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  HGRGSESTGVGLFTQQVMQGNPLLPVEENGRLNDPILRENFMTRVFTYQKWLDLVDEGVT  179
             G  +  +G GLFT  +M+  P LP+EE+GRL+DP+LRENF++R+F+ +    L  +G++
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  KHKLIQFHSAHKYLVMCHHIEGYKSLGKLLAS-NDL-EIDELAEKYIEGLMTALMHHANR  237
            +H L+ FHS  K  ++ HH  GY+ +G ++A  ++  ++D +  +Y E LM+ L H A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  238  GSHANTLHHLQGYFKKQLSSAHKQELTNQISSFREGLVPLLVPLTLINHYLMEYPNEYLE  297
             +H+N L H+QGYF + L+S ++ EL + I ++R G +P+L PLTL++HYL E P++YL 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  298  SQVYLNPHPQELKLR  312
            SQ Y++P P+ L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

176) Marme_1053 in NC_015276


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  251 bits (937),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 136/318 (43%), Positives = 217/318 (69%), Gaps = 2/318 (0%)

Query  31   LIGKIPVGISSCLLGDNVRFNGGHSRSTYCLGPLSEYFEYKKFCPEVAAGFGTPRPTLRL  90
            +  K  VGIS+CL G  VRF+GGH R  + + +L+    YK +CPEVA G+  PRP+LRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  91   IGDPNAPV-MTYTKGTGEDLTGQFKQASERYLATMPELDGYIVMKNSPSCGISRIKVYQE  149
            I    + + M Y+ +  +D+T + +  ++R+L+T+ EL G+IV  +SPSCG+ R+++Y+E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  150  NGHPHMERVSGLFTDALMRKFPLLPVEEDGRLNDPALRENFMLRVFAHHEFRLSVAYAPT  209
            +G+      +GLFT A+M K+P LP+EEDGRL+DP LRENF+ R+FA HE+    A + +
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  210  MKALIDFHSRYKYLVMAHSQPAYKSLGRLLSG-QEKCAIETLCERYFSEFMTALSKPAKR  268
              +L+ FHSRYK  ++AH Q++Y+ +G +++  +E   ++++  RY   +M+ L  PA R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  269  RNHCNVLMHLVGYLKKAVDASIRKDILEVIEQYRRGEVFLTTPMTILHHYLKQYGSDYVK  328
            +NH NVLMH+ GY+ +A+++  R ++ EVI  YR G + + +P+T+L HYL +   DY++
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  329  HQRYFEPYPKALGIRNSV  346
             Q YFEPYP +LG+R ++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

177) Sfri_3039 in NC_008345


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  249 bits (929),  Expect = 2e-67, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 217/317 (69%), Gaps = 5/317 (1%)

Query  8    VPEKIQIGISSCLLGNQVRFDGGHKNSYYCRQEIEPFFEYTTVCPEMAIGMGTPRKSIRQ  67
            + +K  +GIS+CL G  VRFDGGHK   +  + + P   Y  +CPE+AIG+  PR ++R 
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  68   IRDG-DVVHIRSADGTLD-VTDKLNEYSQAKVEELDYLGGYILCAKSPTCGMERVTEYKI  125
            I+   + +++R +++  D VT+++N +++  +  ++ L+G+I+CAKSP+CGMERV  Y  
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  126  GTNNGSKTGVGVFAKKLMERYPLLPVEEEGRLHDLPLRENFFTRVFAYNDWKQMTQSGLT  185
              N G K+G G+F+  +M++YP LP+EE+GRLHD  LRENF++R+FA ++ + +   GL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  186  KHKLMQFHSRYKYLLMAHSPKWYRDLGPILADIQDVEQTAQ---QYFEGFMTALKIIATR  242
            +H L+ FHSRYK  L+AH    YR++GP++A +++ ++      +Y E +M+ L+  A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  243  KNHTSTLQHIQGYFKKQLTAEQKEELSESILKYRQGLLPLLVPITLINHYVREFHTPYIQ  302
            KNHT+ L HIQGYF + L + Q+ EL E IL YR G LP+L P+TL++HY+ E    Y++
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  303  DQVYLNPHPEALKLRYA  319
             Q Y++P P++L LR A
Sbjct  301  SQNYFEPYPDTLGLRLA  317

178) AHA_1099 in NC_008570


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  247 bits (921),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 147/314 (47%), Positives = 217/314 (70%), Gaps = 7/314 (2%)

Query  6    VGISACLLGQEVRFDGGHKRSSFCERDLGAHFDYHPVCPEMAIGLGAPRAAIRLVKRH-G  64
            VGIS+CL G  VRFDGGHKR  F    L++   Y P+CPE+AIGL  PR+A+RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  65   EIRAEASNGSFD-VTEKLIAFSEQKARQLDFISGYILCAKSPSCGMERVRIYGANNEGSA  123
            +IR   S+++ D VTE++ AF+++    ++ ++G+I+CAKSPSCGMERVR+Y+ + + + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  124  KEGVGLFAKALMEANPLLPVEEDGRLCDPILRENFVLRVFAYHDWQQLCARGITASALIR  183
            K G GLF+ A+M+  P LP+EEDGRL DP+LRENF+ R+FA H+ + L A+G++  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  184  FHSRYKYLVLSHATTHYRalgkllgnlakadlQQVADSYIK---GLMAALTLRANRRSHT  240
            FHSRYK  +L+H  + YR            + +++   +++    LMA L   A+R++HT
Sbjct  187  FHSRYKLQLLAHHQAGYR--EIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  241  NVLMHLQGYFKRVLTPAQKQELCDTIDKYRTGVFPLLVPLTLIRHYLREYPNPYLAEQVY  300
            NVLMH+QGYF R L + Q+ EL + I  YR+G +P+L PLTL++HYL E P+ YL  Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  301  LNPHPDTLKLRYGL  314
            ++P PDTL LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

179) AHML_05880 in NC_021290


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  246 bits (918),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 146/314 (47%), Positives = 217/314 (70%), Gaps = 7/314 (2%)

Query  6    VGISACLLGQEVRFDGGHKRSSFCERDLGAHFDYHPVCPEMAIGLGAPRAAIRLVKRH-G  64
            VGIS+CL G  VRFDGGHKR  F    L++   Y P+CPE+AIGL  PR+A+RL++   G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  65   EIRAEASNGSFD-VTDQLIAFSEQKARQLDFISGYILCAKSPSCGMERVRIYGANNEGSA  123
            +IR   S+++ D VT+++ AF+++    ++ ++G+I+CAKSPSCGMERVR+Y+ + + + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  124  KEGVGLFAKALMEANPLLPVEEDGRLCDPILRENFVLRVFAYHDWQQLCARGITASALIR  183
            K G GLF+ A+M+  P LP+EEDGRL DP+LRENF+ R+FA H+ + L A+G++  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  184  FHSRYKYLVLSHATTHYRalgkllgnlakadlQQVADSYIK---GLMAALTLRANRRSHT  240
            FHSRYK  +L+H  + YR            + +++   +++    LMA L   A+R++HT
Sbjct  187  FHSRYKLQLLAHHQAGYR--EIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  241  NVLMHLQGYFKRVLTPAQKQELCDTIDKYRTGVFPLLVPLTLIRHYLREYPNPYLAEQVY  300
            NVLMH+QGYF R L + Q+ EL + I  YR+G +P+L PLTL++HYL E P+ YL  Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  301  LNPHPDTLKLRYGL  314
            ++P PDTL LR ++
Sbjct  305  FEPYPDTLGLRLAI  318

180) Mmwyl1_1153 in NC_009654


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  246 bits (918),  Expect = 1e-66, Method: Compositional matrix adjust.
 Identities = 132/318 (42%), Positives = 216/318 (68%), Gaps = 2/318 (0%)

Query  11   LTHKIPVGISACLLGENVRYNGGHSHSDYCDKVLSHYFEYQKFCPEVAAGFGTPRPTLRL  70
            + +K  VGIS+CL G  VR++GGH + D+  + L+    Y+ +CPEVA G+  PRP+LRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  71   -EGNPDEPRMVFSKNSEEDVSEVFMAASNKYLENLSHLDGYILMKKSPSCGMERIKVYQE  129
             +   ++ RM +S  +++DV+E   A ++++L  +++L G+I+  KSPSCGMER+++Y+E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  130  NGHPHMQRSAGLFTKALQQRYPLLPVEEDGRLNDPALRENFLLRVFTHHDFRHSMGQDAQ  189
            +G+   + ++GLFT A+ ++YP LP+EEDGRL+DP LRENF+ R+F+ H++    +Q+  
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  190  MKDLIAFHSRYKYMVMAHSQPIYRKLGRMLSGNDPR-PFNQLKTAYFEILMTTLSKPAER  248
               L+AFHSRYK  ++AH Q+ YR +G  ++  + +  ++ +   Y E LM+ L  PA R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  249  KNHCNVLMHLVGYLKHAVDVSVRKDILDVVEQYRRGEVNLATPVTLLHHYLKHYGSEYIN  308
            KNH NVLMH+ GY+ +A++   R ++ +V+  YR G + + +P+TLL HYL +   +Y+ 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  309  EQSYFIPYPSPLGIRNTV  326
             Q+YF PYP  LG+R ++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

181) Ping_0997 in NC_008709


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  246 bits (917),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 140/314 (45%), Positives = 216/314 (69%), Gaps = 4/314 (1%)

Query  6    DEKIQVGISSCLIGNKVRFDGGHKQSSYCTKVLSDYFDFQPICPEMAIGLGTPRKAIRLV  65
            ++K  VGIS+CL G  VRFDGGHK+  +  + L+    ++PICPE+AIGL  PR A+RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  66   KDE-DRIRVMASDGSFE-VTEQLTEFGEKTSPLLTSLSGYIFCAKSPTCGMERVTLYNEG  123
            +   + IR+  S+++ + VTE++  F+++  P +  L+G+I CAKSP+CGMERV LY+E 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  124  TNQGNRDGVGVFAAKVMADHPLLPVEEQGRLNDLLLRENFITRVFAYHRWQSLVAGGLSI  183
             N+G + G G+F+A +M   P LP+EE+GRL+D +LRENFI+R+FA H  ++L A GLS 
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  184  RKLIQFHAEHKYLLMSHNVKLYYKLGPLLS--GSKEAIEVVAKQYIEGFMATLKTLPNRK  241
            + L+ FH+  K  L++H+   Y  +GP+++     + ++    +Y E +MA L+  ++RK
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  242  SHTNTLSHLQGYFKRSLSSAERVDLANDIDKYRKGLLPLMVPITLITHYLTLYPDPYLKQ  301
            +HTN L H+QGYF R+L+S +R +L + I  YR G LP++ P+TL+ HYL+  PD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  302  QVYLHPHPEELKLR  315
            Q Y++P P+ L LR
Sbjct  302  QNYFEPYPDTLGLR  315

182) A458_10985 in NC_018028


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  246 bits (920),  Expect = 9e-67, Method: Compositional matrix adjust.
 Identities = 141/315 (45%), Positives = 219/315 (70%), Gaps = 2/315 (0%)

Query  7    TPKIGISACLLGNPVRFNGGHKESRLCSETLAQHFEFVPVCPEVAIGLGTPREPIRLVGD  66
             P +GIS+CL G  VRF+GGHK   +  ++LA    + P+CPEVAIGL  PR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  67   T-DAPKAVGTVRPELDVTEALAAYGRQIAGQLHDINGYILMQKSPSCGMERVKVYAANGH  125
            T +  +   +  P+ DVTE + A++ ++   + ++ G+I+  KSPSCGMERV++Y  +G+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  126  TQPGGGSGVFAQALMQACPDLPVEEDGRLNDAVLRENFLTRVYAHADWQRLRQAGLSRRA  185
                +G+G+F+ A+M+  P LP+EEDGRL+D+VLRENF++R++A  + + LR  GLSR++
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  186  IVDFHSRYKYQLMASNPLQYKVLGRLVAQLAE-HSLEEFAPQYFSQLMQALKKPATRGTH  244
            ++ FHSRYK QL+A +   Y+ +G +VA+L E + L+ F  +Y  +LM  L+ PA+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  245  CNVLLHLSGYLKDALGAEDRREMRHLIDQYRAGVIPLVVPLTLLKHHFRRHPDHYVARQA  304
             NVL+H+ GY+  AL + +R E+R++I  YRAG +P++ PLTLLKH +  HPD+Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  305  YMQPHPETLSLRNGI  319
            Y +P P+TL+LR +I
Sbjct  304  YFEPYPDTLGLRLAI  318

183) Sden_2839 in NC_007954


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  245 bits (914),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 216/316 (69%), Gaps = 7/316 (2%)

Query  10   EKIQVGISSCLLGQKVRFDGGHKNSYYCDVTLREHVEFVPVCPEMSIGLGAPRKSIRQVR  69
            +K  VGIS+CL G  VRFDGGHK   +   +L   V + P+CPE++IGL  PR ++R ++
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  70   D--GDTLLIQSGDGSLDVTDKLNTFSQQKVAELDFLGGYILCAKSPTCGMERVTEYKIGT  127
               GD  +  S     DVT+++N+F+++ ++ ++ L+G+I+CAKSP+CGMERV  Y    
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  128  NNGSKAGVGVFAKVLMETYPHLPVEEEGRLNDLVLRENFITRLYAYHDWFSMLASGLTKH  187
            N G KAG G+F+  +M+ YP LP+EE+GRL+D VLRENFI+R++A H+  ++ A GL++H
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  188  KLIQFHSRYKYLIMAHSPKWYRALGPILADIQDLSASADAYF----DGFMTALKIKATRK  243
             L+ FHSRYK  ++AH    YR +GP++A +++     DA+F    + +M+ L+  A+RK
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHE-WDDLDAFFVRYREKLMAILRHPASRK  241

Query  244  NHTSTLQHIQGYFKKHLSAGQKQELSESIDKYRQGLLPLLVPITLINHYLREFPTPYIES  303
            NHT+ L HIQGYF + L++ Q+ EL E I  YR G LP+L P+TL++HYL E P  Y+ S
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  304  QVYLNPHPEELKLRYA  319
            Q Y++P P+ L LR A
Sbjct  302  QNYFEPYPDTLGLRLA  317

184) Mar181_2700 in NC_015559


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  244 bits (910),  Expect = 7e-66, Method: Compositional matrix adjust.
 Identities = 131/318 (42%), Positives = 212/318 (67%), Gaps = 2/318 (0%)

Query  11   LERKIPIGISACLLGDNVRFNGGHSHSNYCDHVLSDYFDYQKFCPEVAAGFGTPRPTLRL  70
            ++ K  +GIS+CL G  VRF+GGH + ++  + L+    Y+ +CPEVA G+  PRP+LRL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  71   -EGDPTDPIMTFSKKTGEDLTDRFHSGSADYLDTLAHLDGYIVMKNSPSCGMERIKVYQE  129
             +    D  M +S    +D+T+R ++ +  +L T+++L G+IV  +SPSCGMER+++Y+E
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  130  NGHPHMQRTAGLFTKKLMERYPLLPVEEDGRLNDPNLRENFLLRVFTHHDFRHSVPEEPK  189
            +G+   +  +GLFT  +M++YP LP+EEDGRL+DP LRENF+ R+F+ H++    ++   
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  190  LKDLIEFHSRYKYLVMAHSQPIYRELGRLLSGNDPR-SIKALKEAYFKTLMTCLSKPAKR  248
               L+ FHSRYK  ++AH Q+ YRE+G +++  + +  + A+   Y   LM+ L  PA R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  249  KNHCNVLMHLVGYLKNAVDVSVRKDILDVVEQYRRGEVNLVTPMTLLHHYLKHHGSEYIN  308
            KNH NVLMH+ GY+  A++   R ++ +V+  YR G + +++P+TLL HYL +H  +Y+ 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  309  QQSYFTPYPSPLGIRNTV  326
             Q+YF PYP  LG+R ++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

185) Kkor_2382 in NC_013166


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  243 bits (906),  Expect = 1e-65, Method: Compositional matrix adjust.
 Identities = 135/313 (44%), Positives = 212/313 (68%), Gaps = 2/313 (0%)

Query  2    SKIKIAISSCLLGNKVRFDGGHKQSKYCLNVLSDWFEYTPVCPEMGIGLPTPRPPIHLVR  61
            +K  ++IS+CL G  VRFDGGHK+  + +N L+ W  Y P+CPE++IGLP PRP+++L++
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  62   VG-DDIRVKKVDDHSLDVTDELRDYAHKTMPRIQDACGYIVIRNSPSCGMERVKVYHENG  120
               +DIR++  +    DVT+ +  +A++ +P I +  G+IV  +SPSCGMERV++Y+E+G
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  121  NPAGESYRGVYIDEIMKLHPNLPVEEEGRLQDPKLRENFITRVFAYNEWKESVVNEPSMK  180
            N +  +  G++   +M   P LP+EE+GRL+DP LRENFI+R+FA +E +    +  S  
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  181  KLIEFHSRYKYLVMAHSYQAYKELGRLVANTEQR-EITELLQEYEDTLMRILKKIASSKS  239
             L+ FHSRYK  ++AH   +Y+E+G +VA  +++ ++  ++  Y + LM IL+  AS K+
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  240  HTNVLYHILGYLKRDLTSAAKQELVKVIEQYRKGLVTLVVPVTLINHYLTQFGSDYIKQQ  299
            HTNVL HI GY+ R L S  + EL  VI  YR G + ++ P+TL++HYL++   DY++ Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  300  AYLDPHPLELGLR  312
             Y++P P  LGLR
Sbjct  303  NYFEPYPDTLGLR  315

186) T1E_0974 in NC_018220


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  240 bits (894),  Expect = 1e-64, Method: Compositional matrix adjust.
 Identities = 135/317 (43%), Positives = 220/317 (70%), Gaps = 1/317 (0%)

Query  7    HRKPRIAISACLTGHSVRYNGGHKASDLCRKQLEQHFDWLPVCPEVAIGLGVPRDPIRLV  66
            + KP ++IS+CLTG +VR++GGHK  D+  + L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-EQPEVVGTRDPGKDLTDPLRTYGEQMANELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T+ + +++++    ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAVHGGRGVYAQAFCALRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLNR  185
            G+ +  +G G+++ A     P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKADEPQSIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   D+ +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THSNVLQHLSGYFKDALTQQDKAELQAVIGQYQQGVVPLVVPMTLLKHHLRKHPDPYLQQ  305
             H+NVL H+ GYF  AL  +++AEL+ VI  Y+ G +P++ P+TLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

187) Psest_2395 in NC_019936


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  239 bits (890),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 139/315 (45%), Positives = 220/315 (70%), Gaps = 2/315 (0%)

Query  7    TPKIGISACLLGNPVRFNGGHKESRLCSETLAQHFEFIAVCPEVAIGLGTPREPIRLVGQ  66
             P +GIS+CL G  VRF+GGHK   +  ++LA    + ++CPEVAIGL  PR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  67   T-DAPRAVGTVRPELDVTEALAAYGRQIAEQLQDISGYILMQKSPSCGMERVKVYGSNGH  125
            T +  R   +  P+ DVTE + A++ ++   + +++G+I+  KSPSCGMERV++Y+ +G+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  126  TLPGGGAGVFAQALMQARPDLPVEEDGRLNDAVLRENFLTRVYAYADWQRLLQGGITRRA  185
                +G+G+F+ A+M+  P LP+EEDGRL+D+VLRENF++R++A  + + L   G++R++
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  186  IVDFHSRYKYQLMASNPLQYRVLGRLVANIAER-SLDEFASHYFSQMMQALKKPATRGTH  244
            ++ FHSRYK QL+A +   YR +G +VA + E+  LD F  +Y  ++M  L+ PA+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  245  CNVLLHLSGYLKDALGSEDRREMRHLIDQYRAGVIPLVVPLTLLKHHFRRHPDHYVARQA  304
             NVL+H+ GY+  AL S +R E+R++I  YRAG +P++ PLTLLKH +  HPD+Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  305  YLQPHPETLSLRNGI  319
            Y++P P+TL+LR +I
Sbjct  304  YFEPYPDTLGLRLAI  318

188) Nwat_2718 in NC_014315


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  239 bits (891),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 135/309 (44%), Positives = 211/309 (69%), Gaps = 3/309 (0%)

Query  24   LAISSCLLGERVRFDGGHKRDTYITEALNAYFDFVPVCPEVAIGMGTPREPIRIVKTGQG  83
            ++IS+CL G  VRFDGGHKR  ++ ++L +   + P+CPEVAIG+  PR ++R+++T  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  84   -LRARGVRHPELDVTDPLHQFGKAMADALGDIDGYILKKDSPSCGMERVRVHGAGGAPSR  142
             +R R  + P+ DVT+ ++ F+     ++G++ G+I+   SPSCGMERVR+ +  G  +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  143  -TGTGLYAQAFMARRPWLPIEEEGRLNDPVLRENFFERVFVHYRWRQIGAAGITPAALVE  201
             +GTGL++ A M + PWLPIEE+GRL+DPVLRENF+ R+F       + A G++  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  202  FHSRHKFMVMAHSQAAYRRLGRLVAK-AGSESLETLVSSYEAELMSALQRRATRKGHTNV  260
            FHSR K+ ++AH QA+YR +G +VA+    + L+++   Y   LM+ L++ A+RK HTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  261  LMHLLGFLRTQLDKADRAELLESMENYRLGLVPLIVPMTLLKHHFRRHPNPYVNQQYYLN  320
            LMH+ G+++  L+  +RAEL E +  YR G +P++ P+TLLKH +  HP+ Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  321  PHPPELMLR  329
            P P  L LR
Sbjct  307  PYPDTLGLR  315

189) H045_00585 in NC_020209


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  239 bits (892),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 137/317 (44%), Positives = 211/317 (67%), Gaps = 1/317 (0%)

Query  4    TAKPRIGISACLLGENVRFNGGHKQSQLCSETLADYFEFVPLCPEVAIGLGIPREAIRLV  63
              KP +GIS+CL G  VRF+GGHK+ ++  ++LA    + P+CPEVAIGL +PR A+RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  64   GDAANPQAVGTVH-RELDVTQPLDEYGQQMAREHTDLCGYIFMQKSPSCGLERVKVYRDN  122
              +     +   H  + DVT+ ++ ++++      +L G+I   KSPSCG+ERV++Y ++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  123  GAPVDGGGRGIYAQAFCARHPNLPVEEDGRLNDPVLRENFLTRVFVYASWQQLLAEGLTR  182
            G     +G G+++ A   + P LP+EEDGRL+DPVLRENF++R+F     + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  183  HRLLSFHARYKYLLMAHSPVHYKSLGNLLGSMSKGDDLPALADCYFSDLMTGLKKCATRG  242
            H LL+FH+RYK  L+AH    Y+ +G +++ +   DDL A+   Y   LM+ L+  A+R 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  243  THTNVLQHISGYLKQAISSDDKQEMQTVIDQYRHGIVPLVVPLTLLKHHFRQHPDRYIAQ  302
             HTNVL HI GY+ +A++S ++ E++ VI  YR G +P++ PLTLLKH + +HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  303  QAYLQPHPENLSLRNAI  319
            Q Y++P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

190) ybgA in NC_016830


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 133/317 (42%), Positives = 216/317 (69%), Gaps = 4/317 (1%)

Query  7    AKPRIAISACLMGAEVRFNGGHKQSQLCSRTLVDYFDFVPVCPEVAIGLGIPREPIRLVG  66
             KP ++IS+CL GA VRF+GGHK+ ++   +L     + P+CPEVAIGL +PR ++RL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  67   NP--EHPEALGTVNRDLNVTRALADYGQQMAGELDDICGYIFMQKSPSCGLERVKVYDHN  124
                +     +   +D +VT  +  ++++    ++++ G+I   KSPSCG+ERV++YD++
Sbjct  63   TTCGDIRMRYSHAPHD-DVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  125  GVTQDSGGRGIYAQAFCERHPDLPVEEDGRLNDPVLRENFLTRVFAYAAWQSLRRQGLTR  184
            G     +G G+++ A  ++ P LP+EEDGRL+DPVLRENF++R+FA    ++LR QGL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  185  RDLIEFHARYKYLLMAHNPVQYKALGNLLGKM-GKADPNELGPRYFSALMAALKKCATRR  243
            + L+ FH+RYK  L+AH+   Y+ +G +++++    D + +  RY   LMA L+  A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  244  THTNVLQHLSGYLKRAIDAEDKQEVQHLIGQYRLGIVPLVVPLTLLKHHLRQHPDPYLAQ  303
             HTNVL H+ GY+ RA+++ ++ E++++I  YR G +P++ PLTLLKH L +HPD YL  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  304  QVYLQPHPENLSLRNAI  320
            Q Y++P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

191) PST_1966 in NC_009434


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 142/315 (46%), Positives = 216/315 (69%), Gaps = 2/315 (0%)

Query  24   TPRIGISACLLGNPVRFNGGHKESRLCSETLAQHFEFVPVCPEVAIGLGTPREPIRLVGD  83
             P +GIS+CL G  VRF+GGHK   +  ++LA    + P+CPEVAIGL  PR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  84   A-DAPRAVGTVRPELDVTDALSAYGRQIAEQLHDISGYILMQKSPSCGMERVKVYAANGH  142
            + +  R   +  P+ DVT+ ++A++ ++   + +++G+I+  KSPSCGMERV++Y  +G+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  143  TLPGGGTGVFAQALMQARPDLPIEEDGRLNDAVLRENFLTRVYAYADWQRLLQTGLSRRA  202
                +GTG+F+ A+M+  P LPIEEDGRL+D+VLRENF++R++A  + + L   GLSR++
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  203  IVDFHSRYKYQLMASNPLEYKALGRRVAALAE-HALEDFAPGYFSQLMRALKKPATRGTH  261
            ++ FHSRYK QL+A +   Y+ +G  VA L E + L+ F   Y  +LM  L+ PA+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  262  CNVLLHLSGYLKDALGSDDRRELRRLIDQYREGVIPLVVPLTLLKHHFRRHPDHYIARQA  321
             NVL+H+ GY+  AL S +R ELR +I  YR G +P++ PLTLLKH +  HPD+Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  322  YLQPHPETLSLRNGI  336
            Y++P P+TL+LR +I
Sbjct  304  YFEPYPDTLGLRLAI  318

192) PSTAB_1862 in NC_015740


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  236 bits (881),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 142/315 (46%), Positives = 216/315 (69%), Gaps = 2/315 (0%)

Query  7    TPRIGISACLLGNPVRFNGGHKESRLCSETLAQHFEFVPVCPEVAIGLGTPREPIRLVGD  66
             P +GIS+CL G  VRF+GGHK   +  ++LA    + P+CPEVAIGL  PR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  67   A-DAPRAVGTVRPELDVTDALSAYGRQIAEQLHDISGYILMQKSPSCGMERVKVYAANGH  125
            + +  R   +  P+ DVT+ ++A++ ++   + +++G+I+  KSPSCGMERV++Y  +G+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  126  TLPGGGTGVFAQALMQARPDLPIEEDGRLNDAVLRENFLTRVYAYADWQRLLQTGLSRRA  185
                +GTG+F+ A+M+  P LPIEEDGRL+D+VLRENF++R++A  + + L   GLSR++
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  186  IVDFHSRYKYQLMASNPLEYKALGRRVAALAE-HALEDFAPGYFSQLMRALKKPATRGTH  244
            ++ FHSRYK QL+A +   Y+ +G  VA L E + L+ F   Y  +LM  L+ PA+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  245  CNVLLHLSGYLKDALGSDDRRELRRLIDQYREGVIPLVVPLTLLKHHFRRHPDHYIARQA  304
             NVL+H+ GY+  AL S +R ELR +I  YR G +P++ PLTLLKH +  HPD+Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  305  YLQPHPETLSLRNGI  319
            Y++P P+TL+LR +I
Sbjct  304  YFEPYPDTLGLRLAI  318

193) PSTAA_1994 in NC_017532


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  236 bits (881),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 142/315 (46%), Positives = 216/315 (69%), Gaps = 2/315 (0%)

Query  7    TPRIGISACLLGNPVRFNGGHKESRLCSETLAQHFEFVPVCPEVAIGLGTPREPIRLVGD  66
             P +GIS+CL G  VRF+GGHK   +  ++LA    + P+CPEVAIGL  PR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  67   A-DAPRAVGTVRPELDVTDALSAYGRQIAEQLHDISGYILMQKSPSCGMERVKVYAANGH  125
            + +  R   +  P+ DVT+ ++A++ ++   + +++G+I+  KSPSCGMERV++Y  +G+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  126  TLPGGGTGVFAQALMQARPDLPIEEDGRLNDAVLRENFLTRVYAYADWQRLLQTGLSRRA  185
                +GTG+F+ A+M+  P LPIEEDGRL+D+VLRENF++R++A  + + L   GLSR++
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  186  IVDFHSRYKYQLMASNPLEYKALGRRVAALAE-HALEDFAPGYFSQLMRALKKPATRGTH  244
            ++ FHSRYK QL+A +   Y+ +G  VA L E + L+ F   Y  +LM  L+ PA+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  245  CNVLLHLSGYLKDALGSDDRRELRRLIDQYREGVIPLVVPLTLLKHHFRRHPDHYIARQA  304
             NVL+H+ GY+  AL S +R ELR +I  YR G +P++ PLTLLKH +  HPD+Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  305  YLQPHPETLSLRNGI  319
            Y++P P+TL+LR +I
Sbjct  304  YFEPYPDTLGLRLAI  318

194) Swoo_2778 in NC_010506


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 139/315 (45%), Positives = 215/315 (69%), Gaps = 4/315 (1%)

Query  1    MDKKLNIGISACVMGENVRYDSGHKRSQFCTEALSEFANFKAFCPEVAIGLPIPRPTIRQ  60
            M++K  +GIS+C+ G  VR+D+GHKR +F  ++L+    +K++CPEVAIGLP+PRP++R 
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   IIK--DNIITVSRPDGSGDVTEKLTAYGKQVGEQISHLSGFIFCAKSPSCGMERVKVHHH  118
            I    ++I         +DVTE++ A++ +    I++L+GFI CAKSPSCGMERV++ ++
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  119  HGKGSESNGVGLFAREVMKANPLLPAEENGRLNDAVIRENFMTRVFTYQKWLDLAASGIT  178
             G+ +   G GLF+  +M   P LP EE+GRL+D+V+RENF++R+F+ +    L A G++
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  179  KHKLIQFHSEQKYLVMSHHIESYRQLGTLLGSSDL--ALDELANQYIAGLMEALKNKASR  236
            +H L+ FHS  K  +++HH  +YR++G +++  +    LD +  +Y   LM  L++ ASR
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  237  KSHTNTLHHLQGYFKKQLDHAKRQELTEQIDAYRlgltpllvpltlIKHYLLEFPNEYLK  296
            K+HTN L H+QGYF + L+  +R EL E I +YR G  P+L PLTL+KHYL E P++YL+
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  297  QQAYLNPHPKELRLR  311
             Q Y++P P  L LR
Sbjct  301  SQNYFEPYPDTLGLR  315

195) Psefu_0936 in NC_015556


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  236 bits (880),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 129/315 (41%), Positives = 216/315 (69%), Gaps = 2/315 (0%)

Query  10   KPTLGVSACLLGAEVRYNGGHKASRLCLEQLSEYFDFVPYCPEVAIGLGTPREPIRLVGD  69
            KP +G+S+CL GA VR++GGHK   + ++ L+    + P CPEVAIGL  PR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  70   P-AAPRVVGTVHPDQDHTDALAAYGEQVAAELPSISGYIVMQQSPSCGLERVKVYQDNGH  128
              +  R+  +  P++D T+ + A++++  + +  ++G+IV  +SPSCG+ERV++Y+++G+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  129  PSEPKGRGIFTRVLCERHPNLPIEEEGRLNDPVLRENFLTRVFTYSQWQTLCESGLTRGK  188
             +   G G+FT  + ++ P LPIEE+GRL+DPVLRENF++R+F+  + ++L   GL+R  
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  189  LIEFHARHKYLLMATDPLRYKRLGRMLSDLSA-QDLDELAVRYIAELMTALKRCATRGTH  247
            L+ FH+R K  L+A +   Y+ +G  ++ L   +DLD + VRY   LM+ L++ A+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  248  SNVLQHLSGYLKGALSAEEKQEMQQLITQYRKGIIPLVVPLTLLKHHFRQHPDRYIAQQV  307
            +NVL H+ GY+  AL++ ++ E++++I  YR G +P++ PLTLLKH + +HPD Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  308  YLQPHPENLSLRNAI  322
            Y++P P+ L+LR AI
Sbjct  304  YFEPYPDTLGLRLAI  318

196) Noc_0394 in NC_007484


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 133/308 (44%), Positives = 210/308 (69%), Gaps = 3/308 (0%)

Query  25   AISSCLLGERVRFDGGHKRDTYITEALNAYFDFVPVCPEVAIGMGTPREPIRIVKTSQG-  83
            +IS+CL G  VRFDGGHKR  ++ ++L +   + P+CPEVAIG+  PR ++R+++T+ G 
Sbjct  8    GISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCGD  67

Query  84   LRARGVRHSELDVTDPLRQFGEVMAEELGDIDGYILKKDSPSCGMERVRVHGTGGAPSR-  142
            +R R  + ++ DVT+ +  F++     +G++ G+I+   SPSCGMERVR+ +  G  +R 
Sbjct  68   IRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRK  127

Query  143  TGTGLYAQVFMARRPWLPVEEEGRLNDPVLRENFFERVFVHYRWRQIGAAGITPAALVEF  202
            +GTGL++   M + PWLP+EE+GRL+DPVLRENF+ R+F       + A G++  +L+ F
Sbjct  128  AGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLAF  187

Query  203  HSRHKFMVMAHSQAAYRRLGRLVAK-AGSESLETLAPTYEAELMSALRRRATRKGHTNVL  261
            HSR K+ ++AH QA+YR +G +VA+    + L+++   Y   LM+ LR+ A+RK HTNVL
Sbjct  188  HSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNVL  247

Query  262  MHLLGFLRAQLDKADRAELLESMESYRLGLVPLIVPMTLLKHHFRRHPNPYVNQQYYLNP  321
            MH+ G+++  L+  +RAEL E + +YR G +P++ P+TLLKH +  HP+ Y+  Q Y++P
Sbjct  248  MHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEP  307

Query  322  HPPELMLR  329
             P  L LR
Sbjct  308  YPDTLGLR  315

197) Q7A_826 in NC_017857


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  235 bits (875),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 137/315 (44%), Positives = 216/315 (69%), Gaps = 8/315 (2%)

Query  5    VGISSCLLGESVRFDGGHKHLRLCTDSLSRFFEFVAECPEVGIGMGIPRKPIRLV----G  60
            VGIS+CL G +VRFDGGHK++ +  +SL+    + + CPEV+IG+ +PR ++RL+    G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  61   DVDAPQAVAVHDYNLNYTEKLTAFGQQKAHEHSDLCGYIFMKNSPSCGLFRVKVYQENGY  120
            D+    + A HD   + TE++ AF+++     ++L G+I   +SPSCG+ RV++Y+E+G 
Sbjct  67   DIRMRYSHAPHD---DVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  121  PAAETGRGLYADALKKAHPLMPMEESGRLNDPLLRENFITRVFAYYDWKQLVRGGLTHHK  180
             +  +G GL++ A+    P +P+EE GRL+DP+LRENFI+R+FA  + + L   GL++H 
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  181  LINFHSRYKYSLMAHSPKHYAELGRMLAD-AGKHEIEALAEGYFTELMTVLSKIASRKTH  239
            L+ FHSRYK  L+AH    Y E+G  +A     ++++A+   Y   LM++L   ASRK H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  240  TNVLMHLQGYLKKKLSSAEKQELADIINRYRTAELPLIVPITLLKHHFNNHPNAYIVRQA  299
            TNVLMH+QGY+ + L+S ++ EL ++I  YR++ LP++ P+TLLKH + +HP+ Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  300  YLQPYPDALSLRNAI  314
            Y++PYPD+L+LR AI
Sbjct  304  YFEPYPDTLGLRLAI  318

198) PFLU0752 in NC_012660


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  235 bits (875),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 134/317 (43%), Positives = 211/317 (67%), Gaps = 1/317 (0%)

Query  4    TTKPKIGVSACLLGENVRFNGGHKQSLLCSQTLADYFDFVPLCPEVAIGLGIPREPIRLV  63
              KP +G+S+CL G  VRF+GGHK+  +  ++LA    + P+CPEVAIGL +PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  64   GDP-AHPQAVGTVNRELNVTQPLDDYGQQMAAEHTDLCGYIFMQKSPSCGLERVKVYREN  122
                ++ +   +   + +VT+ ++ ++++  +   +L G+I   KSPSCG+ERV++Y E+
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  123  GTPVDGGGRGIYAQAFCARHPNLPVEEDGRLNDPVLRENFLTRVFVYASWQQLLAEGLTR  182
            G     +G G+++ A   + P LP+EEDGRL+DPVLRENF++R+F     + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  183  HRLLAFHSRYKYLLMAHSPAHYKSLGHLLGSMTKGANLDELASCYFSDLMTGLTKCATRG  242
            H LLAFHSRYK  L+AH  A Y+ +G +++ +    +LD +   Y   LM+ L   A+R 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  243  THTNVLQHISGYLKQAISADDKQEMQTVIGQYRHGIVPLVVPLTLLKHHFRQHPDRYIAQ  302
             HTNVL HI GY+ +A+++ ++ E++ VI  YR G +P++ PLTLLKH + +HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  303  QAYLQPHPENLSLRNAI  319
            Q Y++P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

199) Q91_0667 in NC_018697


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  234 bits (874),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 133/312 (43%), Positives = 217/312 (70%), Gaps = 2/312 (0%)

Query  5    VGISSCLLGNEVRFDGGHKHSQLCTDSLSRYFEFVPECPEVASGMSIPRKPIRLIGEV-Q  63
            VGIS+CL G  VRFDGGHK+ ++  +SL+    + P CPEVA G+++PR ++RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   APKVVAVHDNSVDYTDQLKTYSEHKAQQLDELCGYVFMQKSPSCGVFRVKVYQEGGYPAA  123
              ++   H    D T+++++++++    ++EL G++   KSPSCG+ RV++Y+E G  + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  124  EPGRGVYAKAVMQANPLLPVEESGRLEDAVLRESFITRVYAYHNWQQLKKQGLSHHAILE  183
             +G G+++ A+M+  P LP+EE GRL+D+VLRE+FI+R++A H+ + L+ QGLS+H++L 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  184  FHASYKYCLMARTPTHYVELGQLLAD-AGRYDIDDLAERYFSLLMENLSVLATRKTHTNV  242
            FH+ YK  L+A+  + Y E+G ++A    + D+D +  RY   LM  L   A+RK HTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  243  LMHLQGYLKKVLSAKEKQELGNLIEQYRTHQVPLIVPITLLKHHFNNHPDPYIEKQAYLQ  302
            LMH+QGY+ + L+++++ EL ++I  YR+ ++P++ P+TLLKH + +HPD Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  303  PYPDDLSLRNAI  314
            PYPD L+LR AI
Sbjct  307  PYPDTLGLRLAI  318

200) PflA506_0740 in NC_017911


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  234 bits (872),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 136/315 (44%), Positives = 211/315 (67%), Gaps = 1/315 (0%)

Query  6    KPKIAISACLLGENVRFNGGHKQSLLCSQTLSDYFDFVPLCPEVAIGLGIPRQAIRLVGD  65
            KP ++IS+CL G  VRF+GGHK+  +  ++L+    + P+CPEVAIGL +PR A+RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  66   P-NQPQAVGSVNPALNVTQPLDDYGQQMAREHTDLCGYIFMQKSPSCGLERVKVYRDNGT  124
               + +   S  P  +VT+ ++ ++++      +L G+I   KSPSCG+ERV++Y ++G 
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  125  PVDGGGRGIYAQAFCARHPNLPVEEDGRLNDPVLRENFLTRVFVYASWQQLLADGLTRHR  184
                +G G+++ A   + P LP+EEDGRL+DPVLRENF++R+F     + L A+GL+RH 
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  185  LLTFHSRYKYLLMAHSPAHYKSLGHLLGSMGKGIDLQALADGYFSELMAGLKKCATRGTH  244
            LL+FHSRYK  L+AH  A Y+ +G +++ +    DL+A+   Y   LMA L+  A+R  H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  245  TNVLQHISGYLKQAISADDKQEMQTVIGQYRHGIVPLVVPLTLLKHHFRQHPDRYIAQQA  304
            TNVL HI GY+ +A+++ ++ E++ VI  YR G +P++ PLTLLKH + +HPD Y+  Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  305  YLQPHPENLSLRNAI  319
            Y++P P+ L+LR AI
Sbjct  304  YFEPYPDTLGLRLAI  318

201) PSEBR_a4749 in NC_015379


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  234 bits (872),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 133/317 (42%), Positives = 215/317 (68%), Gaps = 4/317 (1%)

Query  7    AKPRIAISACLMGAEVRFNGGHKQSQLCSRTLVDYFDFVPVCPEVAIGLGIPREPIRLVG  66
             KP ++IS+CL GA VRF+GGHK+ ++   +L     + P+CPEVAIGL +PR ++RL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  67   DP--EHPEALGTVNRDLNVTRPLADYGQQMAGELDDICGYIFMQKSPSCGLERVKVYDHN  124
                +     +   +D +VT  +  ++++    ++++ G+I   KSPSCG+ERV++YD++
Sbjct  63   TTCGDIRMRYSHAPHD-DVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  125  GVTQDGGGRGIYAQAFCERHPDLPVEEDGRLNDPVLRENFLTRVFAYAAWQPLRRQDLTR  184
            G     +G G+++ A  ++ P LP+EEDGRL+DPVLRENF++R+FA    ++LR Q+L+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  185  RDLIEFHSRYKYLLMAHNPVQYKALGNLLGNM-GKADPNELGPRYFSALMAALKKCATRR  243
            + L+ FHSRYK  L+AH+   Y+ +G +++ +    D + +  RY   LMA L+  A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  244  THTNVLQHLSGYLKRAIDAEDKQEVQHLIGQYRLGIVPLVVPLTLLKHHLRQHPDPYLAQ  303
             HTNVL H+ GY+ RA+++ ++ E++++I  YR G +P++ PLTLLKH L +HPD YL  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  304  QVYLQPHPENLSLRNAI  320
            Q Y++P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

202) Nhal_0236 in NC_013960


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  233 bits (870),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 127/309 (42%), Positives = 211/309 (69%), Gaps = 3/309 (0%)

Query  25   IAVSSCLLGEKVRFDGGHKRDTYVTEALTAYFDFVPVCPEVAIGMSIPREPIHIVKTDQG  84
            +++S+CL G  VRFDGGHKR  +V ++L++   + P+CPEVAIG+++PR ++++++T  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  85   P-RVRGIRHRDLDVTDKLRQFGEAMAEELEDIDGYILKKDSPSCGMERVRVHGTGGAPSR  143
              R+R  +  + DVT+++  F++     + ++ G+I+   SPSCGMERVR+ +  G  +R
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  144  -TGVGMYAQAFMRRRPWLPVEEEGRLNDPVLRENFFERVFVHYRWRQMQAEGMTPAALVE  202
             +G G+++ A M + PWLP+EE+GRL+DPVLRENF+ R+F       ++A+G++  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  203  FHSRHKFAVMAHSQAVYRRLGRLVAK-AGSEPIETLAAAYGAELMSALKKCATRRGHANV  261
            FHSR K+ ++AH QA YR +G +VA+    + ++++   Y   LM+ L+  A+R+ H+NV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  262  LMHLLGFLRTQLDKEDRAELLESIENYRLGLVPLIVPITLLKHHFRRHPNPYVNKQYYLN  321
            LMH+ G+++  L+  +RAEL E I  YR G +P++ P+TLLKH +  HP+ Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  322  PHPPELMLR  330
            P P  L LR
Sbjct  307  PYPDTLGLR  315

203) Pmen_1073 in NC_009439


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  231 bits (863),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 138/317 (44%), Positives = 217/317 (69%), Gaps = 3/317 (0%)

Query  3    ANKAKLGISACLLGAEVRYNGGHKLSRLCSRSLAEHFDFVAVCPEVGIGMSVPREPIRLV  62
             NK+ +GIS+CL GA VR++GGHK   +   SLA    + ++CPEV+IG++VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   GDP-QAPRAVGTVDRSRDVTDALAAYGERMAAELQGISGFIFMQQSPSCGLERVKVYQD-  120
                   R   +     DVT+ + A+++R  + +  ++GFI   +SPSCG+ERV++Y++ 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  121  GGRPSEPGRGIFAAAFCARHPDLPVEEDGRLNDPVLRENFITRVYAHAEWQQLLQQGLSR  180
            G R   +G G+F+AA   + P LP+EEDGRL+DPVLRENFI+R++A  E + L  QGLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  181  HALIAFHSRYKYLLMATDPVRYKTLGRLLGELHQ-HDLAELAPRYFSELMSALKKCATRG  239
            H+L+AFHSRYK  L+A +   Y+ +G +++ LH+ +DL  +  RY   LM+ L+  A+R 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  240  THSNVLQHLSGYLKHALSADDKREMQQLIGQYRQGIVPLVVPLTLLKHHFRRHPHRYIAE  299
             H+NVL H+ GY+ +AL++ ++ E++++I  YR G +P++ PLTLLKH +  HP+ Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  300  QAYLQPHPEPLSLRNAL  316
            Q Y++P P+ L+LR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

204) PCA10_48180 in NC_021499


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  231 bits (863),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 131/318 (42%), Positives = 218/318 (69%), Gaps = 2/318 (0%)

Query  7    LPQRPKLGISACLLGDPVRFNGGHKESRLCSRTLTEHVDFVALCPEVAIGLGIPREPIRL  66
            + ++P +GIS+CL G  VRF+GGHK   +   +L+  V + ++CPEVAIGL +PR ++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  67   VGDP-AAPRALGRHPQRHDHTEPLAEFGEIMAEQLADISGYIFMQKSPSCGLHRVKVYQA  125
            +    +  R    H+ ++D TE +  F++     +++++G+I   KSPSCG++RV++Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  126  DGHPAEGSGRGIFASAFCARRPDLPVEEDGRLSDPVLRENFLTRVYAYAQWQALCREGLS  185
             G+ +  +G G+F++A   + P LP+EEDGRL DPVLRENF++R++A  + +AL  +GLS
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  186  RRAIIAFHSRYKYQLMANDPVQYRALGRLLGSIGEHAP-EEIGPRYFSALMAALKKCATR  244
            R++++AFHSRYK QL+A++   YR +G +++ + E    + +  RY   LMA L+  A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  245  GTHSNVLQHLSGYLKAHLSPPEKVELQRLIEQYRCGVVPLVVPMTLLKHHFSGHPDHYIA  304
              H+NVL H+ GY+   L++ ++ EL+ +I  YR G +P++ P+TLLKH ++ HPD+Y+ 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  305  QQAYLQPHPEALGLRNAL  322
             Q Y++P P++LGLR A+
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

205) MDS_1138 in NC_015410


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  229 bits (855),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 135/317 (43%), Positives = 222/317 (71%), Gaps = 3/317 (0%)

Query  18   ASKAKLGISACLLGAEVRYNGGHKLSRLCSRSLTEHFDFIPVCPEVGIGMSIPREPIRLV  77
             +K+ +GIS+CL GA VR++GGHK   +   SL+    + P+CPEV+IG+++PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  78   GDPLAPRAVGTADRSRD-VTDALAAYGERMAQELQGISGYIFMQQSPSCGLERVKVYQE-  135
                +   +  ++ ++D VT+ + A+++R    +  ++G+I   +SPSCG+ERV++Y+E 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  136  GGRPSKPGRGIFAAAFCARHPDLPVEEDGRLNDPVLRENFITRVYAHAEWQRLLQQGLTR  195
            G R  K+G G+F+AA   + P LP+EEDGRL+DPVLRENFI+R++A  E + L  QGL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  196  RALIAFHSRYKYLLMATDPARYKSLGRLLGELSQ-HDLGELAPHYFSELMSALKKCATRG  254
            ++L+AFHSRYK  L+A + A Y+ +G +++ L + +DL+ +  +Y   LM+ L+  A+R 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  255  THSNVLQHLSGYLKRALSPDEKQEMQQLIGQYRDGIVPLVVPLTLLKHHFRRHPDRYIAE  314
             H+NVL H+ GY+ RAL++ ++ E++++I  YR G +P++ PLTLLKH +  HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  315  QAYLQPHPEPLALRNAL  331
            Q Y++P P+ L+LR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

206) Mlg_1208 in NC_008340


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  229 bits (854),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 137/317 (44%), Positives = 216/317 (69%), Gaps = 2/317 (0%)

Query  12   HTKIPVGISSCLLGEPVRYDRGHKRSAFITDILAAYFDFRPVCPEVAIGLGVPRPPIRLA  71
            + K  VGIS+CL G  VR+D GHKR  F+ + LA+   ++P+CPEVAIGL VPRP++RL 
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  72   GDP-ERPRAVGVRDPRVDVTAPLRAYGERMAGELDYISGYIFKSKSPSCGLFRVKVYGES  130
                   R    + P+ DVT  + A+++R    ++ ++G+I  +KSPSCG+ RV++Y+E 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  131  GRAPSATGRGLYAQAITEANPLLPVEEEGRLNDPVLRENFIGRVYAYHRWQTLLAEGVTA  190
            G     +G GL++ A+ +  P LP+EE+GRL+DPVLRENFI+R++A H  ++L A+G++ 
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  191  ERLVDFHTAHKLILMAHGRQGLREMGRLVAQAGH-GNLERITEAYGASFMRTLRHKATRR  249
            + L+ FH+  KL L+AH + G RE+G +VA+  + ++L+ +   Y   +M  LRH A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  250  RHTDVLFHLLGYLKRTLESDEKAEAVELIHDYREGRVPLIVPVTLLRHHFRKHPEPYVER  309
             HT+VL H+ GY+ R+L+S ++AE  E+I +YR GR+P++ P+TLL+H +  HP+ Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  310  QLYLHWQPAGLGLWNAI  326
            Q Y++  P  LGL+ AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

207) PFL_5145 in NC_004129


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  228 bits (850),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 129/318 (41%), Positives = 210/318 (67%), Gaps = 2/318 (0%)

Query  1    MSAKPKIAISACLMGVEVRYNGGHKESRLCSRVLSDYFDFVPLCPEVAIGMGTPREPIRL  60
            M+ KP ++IS+CL G  VR++GGHK   +    L+    + P+CPEVAIG+  PR ++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VGDP-EQPRAVGTVDASLDVTLPLAEYGERMAAQVDDICGYIFMQNSPSCGLERVKVYQA  119
            +     + R   +  +  DVT  +  +++R  + ++++ G+I   +SPSCG+ERV++Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NGIPHRNGGRGVYAQAFCAQHPNLPVEEAGRLNDPVLRENFLTRVYVYRDWQALLKQGLT  179
            +G   R++G G+++ A   + P LP+EE GRL+DPVLRENF++R++  ++ +AL  QGL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RRALTDFHSRCKYLLMAHHPEQYKALGNLLGSM-GKGDATLIGPRYFSQLMEALSRCATR  238
            R++L  FHSR K  L+AHH   Y+ +G +++ +   +D   +  RY  +LM  L + A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  239  GTHSNVLQHISGYFKRAISSEDKQEMQRLISQYRQGIVPLVVPLTLLKHHLRQNPDPYIA  298
              H+NVL HI GYF RA++S ++ E++ +I  YR G +P++ PLTLLKH L ++PD Y+ 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  299  QQLYLQPHPEDLSLRNAI  316
             Q Y++P P+ L+LR AI
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

208) CYCME_1932 in NC_021917


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  228 bits (849),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 131/312 (42%), Positives = 215/312 (69%), Gaps = 2/312 (0%)

Query  5    VGISSCLLGNEVRFDGGHKHSRLCTDSLSRYFEFVPECPEVASGMSIPRKPIRLIGEV-Q  63
            VGIS+CL G  VRFDGGHK+  +  +SL+    + P CPEVA G+++PR ++RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  64   APKVVAVHDNSVDYTDQLKTYSEHKAQQLDELCGYVFMQKSPSCGVFRVKVYQEGGYPAA  123
              ++   H    D T+++++++++    ++EL G++   KSPSCG+ RV++Y+E G  + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  124  EPGRGVYAKAVMEAKPLLPVEESGRLEDAVLRESFITRVYAYHNWQQLKKQGLSYQGILE  183
             +G G+++ A+M+  P LP+EE GRL+D+VLRE+FI+R++A H+ + L+ QGLS +++L 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  184  FHASYKYCLMARTPTHYVELGRLLAD-AGKHDIDDLAEHYFSLLMENLSVLATRKTHTNV  242
            FH+ YK  L+A+  + Y E+G ++A     +D+D +  +Y   LM  L   A+RK HTNV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  243  LMHLQGYLKKVLSAKEKLELGNLIEQYRTNQVPLIVPITLLKHHFNNHPDPYIEKQAYLQ  302
            LMH+QGY+ + L+++++ EL ++I  YR+ ++P++ P+TLLKH + +HPD Y+  Q Y++
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFE  306

Query  303  PYPDDLSLRNAI  314
            PYPD L+LR AI
Sbjct  307  PYPDTLGLRLAI  318

209) PPUBIRD1_0787 in NC_017530


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  226 bits (842),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 221/317 (70%), Gaps = 1/317 (0%)

Query  7    HSKPRIAISACLTGHSVRYNGGHKASDLCRKQLEQHFDWLPVCPEVAIGLGVPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+  + L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-EQPEVVGTRDPGKDLTDPLRTYGEQMANELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T+ + +++++    ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAVHGGRGVYAQAFCALRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLNR  185
            G+ +  +G G+++ A     P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKADEPQTIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   D+ +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THSNVLQHLSGYFKDALTQQDKAELQAVIGQYQQGvvplvvpltllKHHLRKHPDPYLQQ  305
             H+NVL H+ GYF  AL  +++AEL+ VI  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

210) PP_0741 in NC_002947


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  226 bits (842),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 221/317 (70%), Gaps = 1/317 (0%)

Query  7    HSKPRIAISACLTGHSVRYNGGHKASDLCRKQLEQHFDWLPVCPEVAIGLGVPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+  + L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-EQPEVVGTRDPGKDLTDPLRTYGEQMANELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T+ + +++++    ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAVHGGRGVYAQAFCALRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLNR  185
            G+ +  +G G+++ A     P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKADEPQSIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   D+ +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THSNVLQHLSGYFKDALTQQDKAELQAVIGQYQQGvvplvvpltllKHHLRKHPDPYLQQ  305
             H+NVL H+ GYF  AL  +++AEL+ VI  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

211) PputUW4_04568 in NC_019670


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  226 bits (842),  Expect = 1e-60, Method: Compositional matrix adjust.
 Identities = 131/317 (42%), Positives = 213/317 (68%), Gaps = 5/317 (1%)

Query  7    KPKIAISACLMGLDVRFNGGHKESRLCSRTLTDYFDFIPVCPEVAIGLGVPRQPIRLVSG  66
            KP ++IS+CL G  VRF+GGHK   +   +L+    + P+CPEVAIGL VPR ++RL+  
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  67   A--DQPEAVGTLDHNLNVTQPLATYGRDMAAQLAGDICGYIFMQNSPSCGLERVKVYHAN  124
            +  D     +   H+ +VT+ + +++    + + G++ G+I   +SPSCG+ERV++Y+ +
Sbjct  64   TCGDIRMRYSHAPHD-DVTERMNAFADRFLPTI-GELAGFIVCAKSPSCGMERVRLYDEK  121

Query  125  GTRADSGGRGIYAQAFCLMHPDLPVEEDGRLNDPVLRENFLTRVFAYSAWQQLRQEGLTR  184
            G R+  +G G+++ A     P LP+EEDGRL+DPVLRENF++R+FA    + LR +GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  185  RGLTDFHSRYKYLLMAHNPVQYKALGHLLGSM-GKNDPQELGPRYFSELMAALKKCATRR  243
            ++L  FHSRYK  L+AH+   Y+ +G +++ +   +D + +  RY   LMA L+  A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  244  THTNVLQHISGYLKQAISREDKQEVQQLISQYHQGIVPLVVPLTLLKHHFRQHPDPYIAQ  303
             HTNVL HI GY+ +A++  ++ E++++I  Y+ G +P++ PLTLLKH + +HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  304  QVYLQPHPENLSLRNAI  320
            Q Y++P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

212) YSA_06550 in NC_017986


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  225 bits (839),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 220/317 (70%), Gaps = 1/317 (0%)

Query  7    HRKPRIAISACLTGHSVRYNGGHKASDLCRKQLEQHFDWLPVCPEVAIGLGVPRDPIRLV  66
            + KP ++IS+CLTG +VR++GGHK  D+  + L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-EQPEVVGTRDPGKDLTDPLRTYGEQMANELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T+ + +++++    ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAVHGGRGVYAQAFCALRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLNR  185
            G+ +  +G G+++ A     P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKADEPQSIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   D+ +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THSNVLQHLSGYFKDALTQQDKAELQAVIGQYQQGvvplvvpltllKHHLRKHPDPYLQQ  305
             H+NVL H+ GYF  AL  +++AEL+ VI  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

213) Pput_0769 in NC_009512


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  225 bits (839),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 220/317 (70%), Gaps = 1/317 (0%)

Query  7    HRKPRIAISACLTGHSVRYNGGHKASDLCRKQLEQHFDWLPVCPEVAIGLGVPRDPIRLV  66
            + KP ++IS+CLTG +VR++GGHK  D+  + L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-EQPEVVGTRDPGKDLTDPLRTYGEQMANELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T+ + +++++    ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAVHGGRGVYAQAFCALRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLNR  185
            G+ +  +G G+++ A     P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GL+R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKADEPQSIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   D+ +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THSNVLQHLSGYFKDALTQQDKAELQAVIGQYQQGvvplvvpltllKHHLRKHPDPYLQQ  305
             H+NVL H+ GYF  AL  +++AEL+ VI  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

214) PFLCHA0_c51050 in NC_021237


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  225 bits (840),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 130/318 (41%), Positives = 210/318 (67%), Gaps = 2/318 (0%)

Query  1    MSAKPKIAISACLMGVEVRYNGGHKESRLCSRVLTEHFDFVPLCPEVAIGMGTPREPIRL  60
            M+ KP ++IS+CL G  VR++GGHK   +    L+    + P+CPEVAIG+  PR ++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VGDP-EQPRAVGTVDPSLDVTLPLAEYGERMAAEVDDICGYIFMQNSPSCGLERVKVYQA  119
            +     + R   +  P  DVT  +  +++R  + ++++ G+I   +SPSCG+ERV++Y+ 
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  NGIPHRNGGRGIYAQAFCQKHPDLPVEEAGRLNDPVLRENFLTRVYVYRDWQALLKQGLT  179
            +G   R++G G+++ A  +K P LP+EE GRL+DPVLRENF++R++  ++ +AL  QGL+
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  180  RRALTDFHSRCKYLLMAHHPVQYKTLGNLLGSM-GKSDPSLIGPRYFSELMAALSKCATR  238
            R++L  FHSR K  L+AHH   Y+ +G +++ +    D   +  RY   LMA L   A+R
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  239  GTHSNVLQHLSGYLKQAISSADKQEVQHVIGQYRHGIVPLVVPLTLLKHHFRQHPDPYIA  298
              H+NVL H+ GY+ +A++S ++ E+++VI  YR G +P++ PLTLLKH + +HPD Y+ 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  299  QQLYLQPHPENLSLRNAI  316
             Q Y++P P+ L+LR AI
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

215) PSPPH_1012 in NC_005773


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  224 bits (835),  Expect = 5e-60, Method: Compositional matrix adjust.
 Identities = 127/317 (41%), Positives = 211/317 (67%), Gaps = 4/317 (1%)

Query  5    EKPKLGISACLMGAEVRFNGGHKESHLCTRALSKYFDFVQACPEVAIGMGIPREPIRLVG  64
            +KP +GIS+CL GA VRF+GGHK  ++   +L+    +   CPEVAIG+ +PR ++RL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  65   DA--ENPKALGTVNRELDVTEALANYGIQMAEELGDICGYIFMQKSPSCGLERVKVYREN  122
             +  +     +   ++ DVTE +  ++ +    +G++ G+I   KSPSCG+ERV++Y E+
Sbjct  63   TTCGDIRMRYSHAPHD-DVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  123  GAPVDGGGRGIYAQAFCERHPNLPVEEDGRLNDAVLRENFVTRVFAYAAWQQLLKDGVTR  182
            G     +G G+++ A  ++ P LP+EEDGRL+D+VLRENF++R+FA    + L  +G++R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  183  RALTEFHSRYKYQLMANDPVQYKALGKMLGSM-GRTDPNEIAPLYFSELMAALKKCATRR  241
            ++L  FHSRYK QL+A++   Y+ +G  ++ +  + D + +   Y   LMA L+  A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  242  THTNVLQHLCGYLKQTISAEDKQEIQEVISQYHQGIVPLIVPLTLLKHHFRQHPDPYVAL  301
             HTNVL H+ GY+ +++++ ++ E++EVI  Y+ G +P++ PLTLLKH + +HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  302  QVYMQPHPENLSLRNAI  318
            Q Y +P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

216) Pfl01_4734 in NC_007492


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  224 bits (834),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 128/314 (41%), Positives = 209/314 (67%), Gaps = 2/314 (0%)

Query  9    PKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPREPIRLVGDP  68
            P ++IS+CL GA VR++GGHK   +   +LA    + P+CPEVAIGL +PR ++RL+   
Sbjct  5    PVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTT  64

Query  69   -QKPDAVGTVNPSINVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKVYHANGAP  127
                    +  P  +VT+ + A++++    ++++ G+I   +SPSCG+ERV++Y+ +G  
Sbjct  65   CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  128  VNGGGRGIYADAFCARHPDLPVEEAGRLNDPVLRENFITRVLAYREWQQVLQQGLSRRAL  187
               +G G+++ A   + P LP+EE GRL+DPVLRENFI+R++A +E + +  QGLSR++L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  188  TDFHSRYKYLLMAHNPVQYKALGNLLGNM-GRTDPIELGPRYFSELMAALKKCATRRTHS  246
              FHSRYK  L+AH+   Y+ +G +++ +  + D   +  RY   LMA L+  A+R+ H+
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  247  NVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPYIAQQVY  306
            NVL HI GY+ +A+++ ++ E++++I  YR G +P++ PLTLLKH +  HPD Y+  Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  307  LQPHPENLSLRNAI  320
            ++P P+ L+LR AI
Sbjct  305  FEPYPDTLGLRLAI  318

217) PSPTO_1123 in NC_004578


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  224 bits (834),  Expect = 6e-60, Method: Compositional matrix adjust.
 Identities = 127/317 (41%), Positives = 212/317 (67%), Gaps = 4/317 (1%)

Query  5    EKPKLGISACLMGAEVRFNGGHKESHLCTQALSKYFDFVQACPEVAIGLGIPREPIRLVG  64
            +KP +GIS+CL GA VRF+GGHK  ++  ++L+    +   CPEVAIGL +PR ++RL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  65   DA--EHPKALGTVNRELDVTQALADYGIQMADELGDICGYIFMQKSPSCGLERVKVYREN  122
             +  +     +   ++ DVT+ +  ++ +    +G++ G+I   KSPSCG+ERV++Y E+
Sbjct  63   TTCGDIRMRYSHAPHD-DVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  123  GAPVDGGGRGIYAQAFCERHPNLPVEEDGRLNDAVLRENFVTRVFAYAAWQQLLKDGITR  182
            G     +G G+++ A  ++ P LP+EEDGRL+D+VLRENF++R+FA    + L  +G++R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  183  RALTEFHSRYKYQLMANDPVQYKALGKMLGSM-GRSDPNEIAPLYFSELMAALKKCATRR  241
            ++L  FHSRYK QL+A++   Y+ +G  ++ +  + D + +   Y   LMA L+  A+R+
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  242  THTNVLQHLCGYLKQTISAEDKQEIQEVIGQYHQGIVPLIVPLTLLKHHFRQHPDPYVAL  301
             HTNVL H+ GY+ +++++ ++ E++EVI  Y+ G +P++ PLTLLKH + +HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  302  QVYMQPHPENLSLRNAI  318
            Q Y +P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

218) Psyr_0963 in NC_007005


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  224 bits (833),  Expect = 7e-60, Method: Compositional matrix adjust.
 Identities = 127/317 (41%), Positives = 212/317 (67%), Gaps = 4/317 (1%)

Query  5    EKPKLGISACLMGAEVRFNGGHKESHLCTQALSKYFDFVQACPEVAIGMGIPREPIRLVG  64
            +KP +GIS+CL GA VRF+GGHK  ++  ++L+    +   CPEVAIG+ +PR ++RL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  65   DA--ENPKALGTVNRDLDVTQALADYGIQMAAELGDICGYIFMQKSPSCGLERVKVYREN  122
             +  +     +   +D DVT+ +  ++ +  + +G++ G+I   KSPSCG+ERV++Y E+
Sbjct  63   TTCGDIRMRYSHAPHD-DVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  123  GAPVDGGGRGIYAQAFCERHPDLPVEEDGRLNDAVLRENFVTRVFAYAAWQQLLKEGVTR  182
            G     +G G+++ A  ++ P LP+EEDGRL+D+VLRENF++R+FA    + L  +G++R
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  183  RALTEFHSRYKYQLMANDPVQYKALGKMLGSM-GRTDPNEIAPLYFSQLMAALKKCATRS  241
            ++L  FHSRYK QL+A++   Y+ +G  ++ +  + D + +   Y  +LMA L+  A+R 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  242  THTNVLQHLCGYLKQTITSEDKQEIQQVIAQYHQGIVPLIVPLTLLKHHFRQHPDPYVAL  301
             HTNVL H+ GY+ +++ S ++ E+++VI  Y+ G +P++ PLTLLKH + +HPD Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  302  QVYMQPHPENLSLRNAI  318
            Q Y +P P+ L+LR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

219) B479_04200 in NC_019905


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  221 bits (824),  Expect = 4e-59, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 219/317 (70%), Gaps = 1/317 (0%)

Query  7    HSKPRIAISACLTGHSVRYNGGHKASDLCRMQLEEHFDWLPVCPEVAIGLGVPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+    L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GDP-EQPEVVGTRNPGMDLTGPLRSYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T  + +++++  + ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAFHGGRGVYAQAFCARRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLSR  185
            G+ +  +G G+++ A   + P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRSLGRLLGSMSKDDDPQSIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   DD +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THCNVLQHLSGYFKDILTRQDKAELQAIIGQYQQGvvplvvpltllKHHLRKHPDPYLQQ  305
             H NVL H+ GYF   L  +++AEL+ +I  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

220) L483_03760 in NC_021491


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  221 bits (823),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 217/317 (69%), Gaps = 1/317 (0%)

Query  7    HSKPRIAISACLTGHSVRYNGGHKASDLCRTQLDAHFDWLPVCPEVAIGLGIPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+    L +     P+CPEVAIGL +PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-ERPEVVGTRNPGMDLTGPLRNYGEQMAAELDSICGYIFMQKSPSCGLERVKVYQDN  125
                    +  ++ P  D+T  +  ++++  + ++ + G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAIQGGRGVYAQAFCARRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLSR  185
            G+ + ++G G+++ A   + P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GSLVRFHSRYKYLVMANNPQAYRTLGRLLGSMSKDDDPQTIGPRYFSQLMQALRRCASRG  245
             SL+ FHSRYK  ++A++  +YR +G +++ +   DD +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THCNVLQHISGYFKDNLTQQDKAELQTIISQYQQGvvplvvpltllKHHLRKHPDPYLLQ  305
             H NVL HI GYF   L  +++AEL+ +I  Y+ G +P++ PLTLLKH L  HPD YL  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

221) PP4_45380 in NC_021505


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  221 bits (823),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 136/317 (43%), Positives = 219/317 (70%), Gaps = 1/317 (0%)

Query  7    HSKPRIAISACLTGHSVRYNGGHKASDLCRTQLDAHFDWLPVCPEVAIGLGVPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+    L +     P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GNP-ERPEVVGTRNPGMDLTDPLRSYGKQMAAELDDICGYIFMQKSPSCGLERVKVYQDN  125
                    +  ++ P  D+T+ + +++ +  + ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPALHGGRGVYAQAFCAQRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLSR  185
            G+ +  +G G+++ A   + P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GSLVRFHSRYKYLVMANNPQAYRTLGRLLGSMSKDDDPHSIGPRYFSELMQALRRCASRG  245
             SL+ FHSRYK  ++A++  +YR +G +++ +   DD +++  RY   LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THCNVLQHLSGYFKDSLTQQDKAELQTLISQYQQGvvplvvpltllKHHLRKHPDAYLQQ  305
             H NVL H+ GYF  +L  +++AEL+ +I  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

222) PPS_0798 in NC_015733


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  221 bits (823),  Expect = 5e-59, Method: Compositional matrix adjust.
 Identities = 135/317 (43%), Positives = 219/317 (70%), Gaps = 1/317 (0%)

Query  7    HSKPRIAISACLTGHSVRYNGGHKASDLCRMQLEEHFDWLPVCPEVAIGLGVPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+    L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GDP-EQPEVVGTRNPGMDLTGPLRSYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  D+T  + +++++  + ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPAFHGGRGVYAQAFCARRPDLPVEEEGRLHDPILRENFISRVYAYADWQRLLAEGLSR  185
            G+ +  +G G+++ A   + P LP+EE+GRLHDP+LRENFI+R++A  + + L A+GLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRSLGRLLGSMSKDDDPQSIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR +G +++ +   DD +++  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THCNVLQHLSGYFKDILTRQDKAELQAIIGQYQQGvvplvvpltllKHHLRKHPDPYLQQ  305
             H NVL H+ GYF   L  +++AEL+ +I  Y+ G +P++ PLTLLKH L  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPESLGLRNAV  322
            Q Y++P P++LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

223) PSEEN0883 in NC_008027


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  220 bits (820),  Expect = 8e-59, Method: Compositional matrix adjust.
 Identities = 135/317 (43%), Positives = 217/317 (69%), Gaps = 1/317 (0%)

Query  7    SGKPRLAISACLTGQNVRYNAGHKRSDLCRDLLDEHFDWVPVCPEVAIGLGVPREPIRLV  66
            + KP ++IS+CLTG  VR+++GHKR D+  + L       P+CPEVAIGL VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GDP-DHPAVTASRDTTTDLAGPLRAYGEQMAGELDDICGYVFMQKSPSCGLERVKVYQDN  125
                ++  +  S+    D++  + A++++    ++++ G++   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GRPPHLGGRGAFASAFCARRPDLPVEEEGRLHDPVLRENFITRVYAYADWQGLLREGLSR  185
            G   + +G G F++A   + P LP+EE+GRLHDPVLRENFI+R++A  + ++L  +GLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GTLVRFHARYKYLLMAHNPQAYRNLGRLLGSMTRDDAPEQIGPRYFSQLMQALRRCASRG  245
             +L+ FH+RYK  L+AH+  +YR++G +++ +   D  + +  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THGNVLQHLSGYLRKDLKQADKLELQEVIGQYQKGvvplvvpltllKHHLRNHPAPYLMQ  305
             H NVL H+ GY+++ L+  ++ EL+EVI  Y+ G +P++ PLTLLKH L +HP  YL  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPETLGLRNAI  322
            Q Y++P P+TLGLR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

224) PputGB1_0782 in NC_010322


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  220 bits (820),  Expect = 9e-59, Method: Compositional matrix adjust.
 Identities = 138/316 (44%), Positives = 216/316 (69%), Gaps = 1/316 (0%)

Query  8    SKPRIAISACLTGHSVRYNGGHKASDLCRTQLEQHFEWLPVCPEVAIGLGIPRDPIRLVG  67
            +KP ++IS+CLTG +VR++GGHK  D+    L       P+CPEVAIGL +PR ++RL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  68   NP-EQPEVVGTRDPGMDLTGPLRTYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQANG  126
                +  +  ++ P  D+T  + +++++  + ++++ G+I   KSPSCG+ERV++Y+ +G
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  127  HPALHGGRGVYAHAFCALRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLAEGLSRG  186
            + +  +G G+++ A     P LP+EE+GRLHDPVLRENFI+R++A  + + L A+GLSR 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  187  ALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKDDDPLSFGPRYFSQLMQALRRCASRGT  246
            +L+ FHSRYK  L+A++  +YR +G +++ +   DD  +F  RY  +LM  LR+ ASR  
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  247  HCNVLQHLSGYFKDALTQQDKAELQTVIGQYQQGvvplvvpltllKHHLRKHPDPYLQQQ  306
            H NVL H+ GYF  AL  +++AEL+ VI  Y+ G +P++ PLTLLKH L  HPD YL+ Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  307  AYLQPHPESLGLRNAV  322
             Y++P P++LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

225) Desac_0400 in NC_015388


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  217 bits (806),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 129/319 (41%), Positives = 210/319 (66%), Gaps = 20/319 (6%)

Query  16   LGISACLLGEKVRYDGGHKLDRFITETLGRYVEFKPVCPEVECGLGIPREAMRLV----G  71
            +GIS+CL G  VR+DGGHK   F+ ++L+  V +KP+CPEV  GL +PR A+RL+    G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  72   EI----DHPRLQTIRSKID-YTQQMLTWAMNRVKELEADNLHGFIFKSNSPSSGMERVKV  126
            +I     H+  + +  +++ ++++ L            ++L GFI  ++SPS GMERV++
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLP---------TIGELAGFIVCAKSPSCGMERVRL  117

Query  127  YDDKGIPVKK-GVGLFARTFMEHFPLLPVEDEGRLHDPKLRENFIEAIFTFKRWRDTLAG  185
            YD+KG   +K G GLF+ + M+ +P LP+E++GRLHDP LRENFI  IF++       A 
Sbjct  118  YDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  186  GYNVRKLVDFHTRHKLLILSHSQAHYRQMGRLVAHGRE-QPVEALYSRYQQLLLESLRLK  244
            G + + L+ FH+R KL +L+H QA YR++G +VA+ +E + ++A++ RY++ L+  LR  
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHP  237

Query  245  TTVKKHLNVLYHLLGYFKKELSGDEKQELLEIINHYQRGDVPLIVPLTLINHYVRKYQQP  304
            ++ K+H NVL H+ GYF + L++ ++ EL E+I  Y+ G +P++ PLTL++HY+    + 
Sbjct  238  ASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDD  297

Query  305  YLKEQYYLHPHPVELHLRF  323
            YL+ Q Y++P P  L LR+
Sbjct  298  YLRSQNYFEPYPDTLGLRL  316

226) PputW619_4448 in NC_010501


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  217 bits (809),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 139/317 (44%), Positives = 223/317 (71%), Gaps = 1/317 (0%)

Query  7    QSKPRIAISSCLTGHSVRYNGGHKSSDLCRTQLEEHFDWLPVCPEVAIGLGIPRDPIRLV  66
            ++KP ++IS+CLTG +VR++GGHK  D+    L       P+CPEVAIGL +PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GDP-EHPAVVGTRDPGMDVTGPLASYGEQMAAELDDICGYIFMQKSPSCGLERVKVYQDN  125
                 +  +  ++ P  DVT  + +++++  + ++++ G+I   KSPSCG+ERV++Y+++
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  126  GHPaaqggrgayaaaFCARRPDLPVEEEGRLHDPVLRENFISRVYAYADWQRLLTEGLSR  185
            G+ + ++G G ++AA   + P LP+EE+GRLHDPVLRENFI+R++A  + + L ++GLSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  186  GALVRFHSRYKYLLMANNPQAYRQLGRLLGSMSRDDDPQVIGPRYFSQLMQALRRCASRG  245
             +L+ FHSRYK  L+A++  +YR++G +++ +   DD + +  RY  +LM  LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  246  THGNVLQHLSGYFKDALTQQDKAELQHIIDQYQQGvvplvvpltllKHYLRKHPDPYLQQ  305
             H NVL H+ GYF  AL  +++AEL+++I  Y+ G +P++ PLTLLKHYL  HPD YL+ 
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  306  QAYLQPHPDSLGLRNAV  322
            Q Y++P PD+LGLR A+
Sbjct  302  QNYFEPYPDTLGLRLAI  318

227) Adeh_3029 in NC_007760


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  215 bits (801),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 129/314 (42%), Positives = 200/314 (64%), Gaps = 11/314 (3%)

Query  9    IGVSSCLLGQQVRYDGQHKRDAFLTDVLGPFVEWVPVCPELELGLGVPREPIRLVGRSAA  68
            +G+S+CL G  VR+DG HKR  F+ + L+P V   P+CPE+ +GL VPR ++RL+  + +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  69   PSLV--AERSGLDHTEAMRRFAERRVAELAREDLSGYVTKKDSPSCGMERVRVHPPKGGP  126
               +  ++ +  D TE M  FA+R ++ ++  +L+G++    SPSCGMERVR+   KG  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  127  PRREGVGAFARVLMEAFPLLPVEEEGRLNDPVLREGFVERVFAYARWKEAVAAGMTRGAL  186
             R+ G G F+  +M+ +P LP+EE+GRL+DPVLRE F+ R+FA    +   A G++R +L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  187  VAFHTAHKLTLLAHSPAAYRALGARVGGLRKGTIRAEVEA----YGAGLMAALKVPATRG  242
            +AFH+  KL LLAH  A+YR +G+ V+ L+    + +++A    Y   LMA L+ PA+R 
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHE---WDDLDAFFVRYREKLMAILRHPASRK  241

Query  243  RHVNVLQHAAGYLRDRLPAADRKELEESIADFGRGLVPRIVPLTLLRHHVRSQGLEYLAG  302
             H NVL H  GY++  L + +R EL E I ++  G +P + PLTLL+H +  +  +YL +
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  303  QVYLDPDPKELMLR  316
            Q Y++P P  L LR
Sbjct  302  QNYFEPYPDTLGLR  315

228) DaAHT2_2616 in NC_014216


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  215 bits (800),  Expect = 3e-57, Method: Compositional matrix adjust.
 Identities = 130/317 (42%), Positives = 203/317 (65%), Gaps = 6/317 (1%)

Query  1    METPLNIGISACLLGQAVRYDGGHKLDAFLTGTLGRFVTFVPVCPETECGLGVPREAMRL  60
            M+    +GIS+CL G +VR+DGGHK   F+  +L+  V++ P+CPE   GL VPR A+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VGDP-ASPRLVTIRSGIDH-TEKMQKWSIRRVEELAKENLCGFIFKSRSPSSGMERVKVY  118
            +    +  R+   ++  D+ TE+M+  + R +  ++  +L GFI  ++SPS GMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLY  118

Query  119  AGEGAPA-KTGVGLFAKAFMERFPLLPVEDEGRLHDPVLRENWITRIFVLRRWRELLAAN  177
               G  + K+G GLF+ A M+++P LP+E++GRLHDPVLREN I+RIF L+    L A  
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  HSRGGLVAFHTRHKLLLLSHSEKQYRAMGKLVAAAKNYSP-SELFNQYETLLMETLRLKS  236
             SR +L+AFH+R KL LL+H +  YR +G +VA   +      +F +Y   LM  LR  +
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPA  238

Query  237  TKAKHGNVLLHALGHFKKMLSSEEKQEMVAIIDSYRKDLVPLIVPITLLNHYVRKYREPY  296
            ++ +H NVL+H  G F + L+S ++ E+  +I +YR + +P++ P+TLL+HY+    + Y
Sbjct  239  SRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDY  298

Query  297  LAGQVYLNPHPLELKLR  313
            L +Q Y++P P  L LR
Sbjct  299  LRSQNYFEPYPDTLGLR  315

229) Desaf_3268 in NC_016629


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  212 bits (788),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 130/319 (41%), Positives = 205/319 (65%), Gaps = 5/319 (1%)

Query  3    SERMHVGISACLLGHKVRYDGGHQLDQYIARTLGRYMDFVHVCPEVECGLPIPREALRLV  62
            +++  VGIS+CL G  VR+DGGH+  +++  +L+  + +  +CPEV  GLP+PR ALRL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   GDP--AMPRLVTRESRVDHTERMRAWAERKVEELSREELSGFIFKSRSPSSGMERVKVYP  120
                  +    ++ ++ D TERM A A+R +  ++  EL+GFI  ++SPS GMERV++Y 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYD  119

Query  121  EGGGQPVLKGAGIFPRLFMERFPLLPVEDDGRLHDPALRENFIERLFVMHAWQSFQASSP  180
            E G +    G+G+F    M+++P LP+E+DGRLHDP LRENFI R+F +H  ++++A + 
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  SLGGLVSFHTKLKLQLMAHSRKHYDELGRLVAHGKEL-ALPELLARYARTLMEGLKIRAT  239
            S  +L++FH++ KLQL+AH +  Y E+G +VA+  E   L  ++ RY   LM  L+  A+
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  240  PRKHANVLQHILGHFKKELAPDEKQEALELIEHYRQGNVPLIVPVTLLNHFVRKYGKAYL  299
             ++H+NVL HI G F + L + ++ E  E+I  YR G +P++ P+TLL+H++      YL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  300  AEQYYLRPHPLDLRLRNEI  318
              Q Y+ P P  L LR  I
Sbjct  300  RSQNYFEPYPDTLGLRLAI  318

230) TERTU_3476 in NC_012997


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  211 bits (785),  Expect = 4e-56, Method: Compositional matrix adjust.
 Identities = 127/316 (41%), Positives = 203/316 (65%), Gaps = 5/316 (1%)

Query  3    DEKIRIGISSCLLGEQVRFDGGHKHQKYITRELAKFFEFRSFCPEVAIGLGIPREPIRLV  62
            ++K  +GIS+CL G  VRFDGGHK+  ++   LA    ++++CPEVAIGL +PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   LDDDRDHPIRVVGTKDPSIDVTQDLIDCANAQQVWLTDLSGYIFKKDSPSCGMERVKAY-  121
                 D  IR+  +  P  DVT+ +   A+     + +L+G+I    SPSCGMERV+ Y 
Sbjct  62   QTTCGD--IRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  122  -RNSQPTRQGVGLFARTVMENNPLIPVEEEGRLNDEDLRENFIERVYVYHRWRALVAEGL  180
             + ++  + G GLF+ ++M++ P +P+EE+GRL+D  LRENFI R++  H   AL A+GL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  TAKSLVEFHARHKFIAMAHNQKLYRELGRYIAAIPK-NDLHSYAEGYIARLMFCLRKPAT  239
            +  SL+ FH+R K+  +AH+Q  YRE+G ++A +   +DL+++   Y  +LM  LR PA+
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  240  LKNHINVLQHIQGFLGDQIDAEDKQEMVQAIENCRVRKAPLTIPRTLLKHHFRKHPNEYI  299
             KNH NVL HIQG++   +++ ++ E+ + I   R  + P+  P TLLKH +  HP++Y+
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  300  ADSYYLAPFPEELAHR  315
                Y+ P+P+ L+ R
Sbjct  300  RSQNYFEPYPDTLGLR  315

231) Sde_2713 in NC_007912


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  211 bits (784),  Expect = 5e-56, Method: Compositional matrix adjust.
 Identities = 127/317 (41%), Positives = 197/317 (63%), Gaps = 2/317 (0%)

Query  10   ENKIPVGISSCLLGEEVRFNGGHKQSRFCLDHLSRVFEFQGFCPEVAIGMGVPREPIRLV  69
            +NK  VGIS+CL G  VRF+GGHK+  F ++ L+    ++ +CPEVAIG+ VPR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  70   GSI-DAPRAVGTVDASVDVTDALAAYGDEIGRLSHSLCGYILMKNSPSCGLYSAKVYTPK  128
             +  +  R   +  +  DVT+ + A++D +      L G+I+  +SPSCG+   ++Y  K
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  129  GGVLPGKHAGIFARALKAVNPLLPLEEEGRLNDALLRENFIARVFAYSDWRSSVGEQPTA  188
            G       +G+F+ A+    P LP+EE+GRL+D++LRENFIAR+FA  +  +  ++  + 
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  189  NKIVKFHSRYKYMLMAHGQKPYRELGQMVAR-AGTAQIDSFAATYIAAFMEAITKPASRK  247
            + ++ FHSRYK  L+AH Q  YRE+G  VAR     ++D+F   Y   +M  +  PASRK
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  248  GHSNTLYHMLGYLREEVPGEARQALAASIEEYRKGIVNLAVPVALLKHYLKMHGSDYIKA  307
             H+N L H+ GY++  + +  R  L   I  YR G + +  P++LLKHYL  H  DY+++
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  308  QAYLEPYANDLGLRNQI  324
            Q Y+EPY++ LGLR  I
Sbjct  302  QNYFEPYPDTLGLRLAI  318

232) DP2577 in NC_006138


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  208 bits (775),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 130/320 (41%), Positives = 204/320 (64%), Gaps = 13/320 (4%)

Query  1    MDEKIKIGISSCLLGNEVRFNGGHQHDRYITDTLGDFFNFVPVCPEVECGLSVPRESMRL  60
            M++K  +GIS+CL G  VRF+GGH++  ++ ++L+    + P+CPEV  GL+VPR ++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   V----GDARSPRLITNKTGIDHTDKMNKWASVRLEELEQENLCGFIFKSKSPSSGMERVK  116
            +    GD R     ++    D T++MN  A   L  + +  L GFI  +KSPS GMERV+
Sbjct  61   IQTTCGDIRMR--YSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVR  116

Query  117  VYD-KNNVPRTIGVGLFARAFMEHFPIVPVEEEGRLHDPSLRENFIESVFLYQRWRSTLN  175
            +YD K N  R  G GLF+ A M+ +P +P+EE+GRLHDP LRENFI  +F  +   ++L 
Sbjct  117  LYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHE-LNALR  175

Query  176  DFTLKK--LVDFHTQHKLLLRAHSENHYREMGRIVAE-AGSIEPKRLLSSYQENLMAAMR  232
               L +  L+ FH++ KL L AH +  YRE+G +VA      +   ++  Y+E+LMA +R
Sbjct  176  AQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILR  235

Query  233  LKPTVKKHVNVLMHMMGYFKKRLSSDEKQELLDVITRFKNNHIPLIVPITLMNHYIRKYN  292
              ++ K+H NVLMH+ GYF + L+S ++ EL +VI  ++  ++P++ P+TL++HY+    
Sbjct  236  HPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHP  295

Query  293  ESYLQQQHYLNPHPTELRLR  312
            + YL+ Q+Y++P P  L LR
Sbjct  296  DDYLRSQNYFEPYPDTLGLR  315

233) NIDE0204 in NC_014355


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  206 bits (766),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 131/311 (43%), Positives = 198/311 (64%), Gaps = 6/311 (1%)

Query  8    LGISRCLLGEEVRFDGGHKRDVFLTEVLGRYVEWVPVCPEVEAGLGTPREAMRLIGNP-Q  66
            +GIS CL G  VRFDGGHKR  F+ + L+  V   P+CPEV  GL  PR A+RLI     
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  67   QPRLVAIKSGRDHTLA-LETMTGKRLGDLEQLDLSGFVFKKDSPSCGVERVRTYNEHGMP  125
            + R+    + +D+    +++ +++ L  +   +L+GF+    SPSCG+ERVR Y+E G  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  126  GRK-GVGLFARAFLDRFPLIPVEEEGRLCDPILRENFIERVFCYRRWQDLMQSGVTRQAL  184
            GRK G GLF+ A +D++P +P+EE+GRL DP+LRENFI R+F  +  + L   G++R++L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  185  VRFHTIHKYLLLAHSAPHYRQLGRLVAQVNEYRP-KDLAIRYGELFMQALAAKATVRKHV  243
            + FH+  K  LLAH  + YR++G +VA+++E      + +RY E +M  L   A+ ++H 
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  244  NVLQHILGHFKERLDAEEKAELLSVIGDYHQGLTPLIVPLTLIKHYVQIFDVEYIRDQVY  303
            NVL HI G F   L++ ++AEL  VI +Y+ G  P++ PLTL+KHY+     +Y+R Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  304  LNPHPKELMLR  314
            ++P P  L LR
Sbjct  305  FEPYPDTLGLR  315

234) Metme_1702 in NC_015572


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  205 bits (762),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 129/312 (42%), Positives = 199/312 (64%), Gaps = 4/312 (1%)

Query  2    DSILVGISSCLLGNLVRYDGAHKYHSYIERTLGQYFQFRAFCPEVEAGLGVPRPAVQLRE  61
            +  +VGIS+CL G  VR+DG+HK   ++  +L+    ++++CPEV  GL VPRPA++L +
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  62   IG-SHIRVVGVKDHGLDVTEPLRDAAERQREWLAGLCGYILKKDSPSCGMERVKVY--KN  118
               ++IR+        DVTE +   A+R    ++ L G+I+   SPSCGMERV++Y  K 
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  119  EIPARSGVGVFADFLQTHFPTLPVEEEGRLGDPGLRENFIQRVFIRHRWQQLCQNPLTPH  178
            +   ++G G+F+  +   +P LP+EE+GRL DP LRENFI R+F  H  + L  + L+ H
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  179  ALMRFHSRHKLIAMSHEQNRARELGRLVAEARA-DNIDEIGQRYITDLMACLKIVATRGN  237
            +L+ FHSR KL  ++H+Q   RE+G +VA  +  D++D +  RY   LMA L+  A+R N
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  238  HVNVLQHIQGYLKRTIDSDDKQELVDTIEHYRQGNVPLIVPLTLLRHHFRKQPDTFIDES  297
            H NVL HIQGY+ R+++S ++ EL + I  YR G +P++ PLTLL+H +  +PD ++   
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  298  FYMSPHPGELSL  309
             Y  P P+ L+L
Sbjct  303  NYFEPYPDTLGL  314

235) AvCA6_41400 in NC_021150


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  204 bits (759),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 132/317 (42%), Positives = 200/317 (64%), Gaps = 2/317 (0%)

Query  3    TARPKIAISACLLGERVRFNAGHKESRLCSREFARYFDFVPLCPEMAIGLGTPRQPIRLV  62
              +P ++IS+CL G  VRF++GHK   +    +A    + P+CPE+AIGL  PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   GDP-TSPRAVGTRDATLDVGTPLAAYGERMAGELDDIDGFIFMQKSPSCGLERVKVHQAD  121
                   R   ++ +  DV   + A+++R    ++++ GFI   KSPSCG+ERV++ +  
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  122  SHSAEGTGRGLFAAAFCARRPELPVEEEGRLHDPVLCENFVTRVFVHAEWRQSLGQNLSR  181
            ++ +  +G GLF+AA   + P LP+EE+GRLHDPVL ENF++R+F   E     +Q LSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  182  RTLLDFHARHKYLLMASHPQQYralgr-llgdlgrHAPEEFGPCYFARLMAALRRCASRG  240
            ++LL FH+R K  L+A H   YR +G  +     ++  + F   Y  +LMA LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  241  GHGNVLQHLCGYLRPALEPGERAELQRLIEQYRLGMLPLVVPLTLLKHHFRRHPHPYVAR  300
             H NVL H+ GY++ AL++ +RAEL+ +I  YR G LP++ PLTLLKH +  HP+ Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  301  QVYLQPHPEELGLRNAI  317
            Q Y++P P+ LGLR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

236) AvCA_41400 in NC_021149


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  204 bits (759),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 132/317 (42%), Positives = 200/317 (64%), Gaps = 2/317 (0%)

Query  3    TARPKIAISACLLGERVRFNAGHKESRLCSREFARYFDFVPLCPEMAIGLGTPRQPIRLV  62
              +P ++IS+CL G  VRF++GHK   +    +A    + P+CPE+AIGL  PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   GDP-TSPRAVGTRDATLDVGTPLAAYGERMAGELDDIDGFIFMQKSPSCGLERVKVHQAD  121
                   R   ++ +  DV   + A+++R    ++++ GFI   KSPSCG+ERV++ +  
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  122  SHSAEGTGRGLFAAAFCARRPELPVEEEGRLHDPVLCENFVTRVFVHAEWRQSLGQNLSR  181
            ++ +  +G GLF+AA   + P LP+EE+GRLHDPVL ENF++R+F   E     +Q LSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  182  RTLLDFHARHKYLLMASHPQQYralgr-llgdlgrHAPEEFGPCYFARLMAALRRCASRG  240
            ++LL FH+R K  L+A H   YR +G  +     ++  + F   Y  +LMA LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  241  GHGNVLQHLCGYLRPALEPGERAELQRLIEQYRLGMLPLVVPLTLLKHHFRRHPHPYVAR  300
             H NVL H+ GY++ AL++ +RAEL+ +I  YR G LP++ PLTLLKH +  HP+ Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  301  QVYLQPHPEELGLRNAI  317
            Q Y++P P+ LGLR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

237) Avin_41400 in NC_012560


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  204 bits (759),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 132/317 (42%), Positives = 200/317 (64%), Gaps = 2/317 (0%)

Query  3    TARPKIAISACLLGERVRFNAGHKESRLCSREFARYFDFVPLCPEMAIGLGTPRQPIRLV  62
              +P ++IS+CL G  VRF++GHK   +    +A    + P+CPE+AIGL  PR ++RL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  63   GDP-TSPRAVGTRDATLDVGTPLAAYGERMAGELDDIDGFIFMQKSPSCGLERVKVHQAD  121
                   R   ++ +  DV   + A+++R    ++++ GFI   KSPSCG+ERV++ +  
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEK  121

Query  122  SHSAEGTGRGLFAAAFCARRPELPVEEEGRLHDPVLCENFVTRVFVHAEWRQSLGQNLSR  181
            ++ +  +G GLF+AA   + P LP+EE+GRLHDPVL ENF++R+F   E     +Q LSR
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  182  RTLLDFHARHKYLLMASHPQQYralgr-llgdlgrHAPEEFGPCYFARLMAALRRCASRG  240
            ++LL FH+R K  L+A H   YR +G  +     ++  + F   Y  +LMA LR+ ASR 
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  241  GHGNVLQHLCGYLRPALEPGERAELQRLIEQYRLGMLPLVVPLTLLKHHFRRHPHPYVAR  300
             H NVL H+ GY++ AL++ +RAEL+ +I  YR G LP++ PLTLLKH +  HP+ Y+  
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  301  QVYLQPHPEELGLRNAI  317
            Q Y++P P+ LGLR AI
Sbjct  302  QNYFEPYPDTLGLRLAI  318

238) DMR_15940 in NC_012796


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  204 bits (758),  Expect = 6e-54, Method: Compositional matrix adjust.
 Identities = 133/320 (42%), Positives = 197/320 (62%), Gaps = 9/320 (2%)

Query  1    MSDSIRVGVSSCLLGNPVRYDGGHKRDSYVVDTLGRYFEFVPVCPEVECGLGVPREAMRL  60
            M++   VG+S+CL G  VR+DGGHKR  +V+++L+    + P+CPEV  GL VPR A+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   VGDP--EAPRLVTIKTGVDLTERMNAWAAGRVAELAEERLCGFIFKAKSPSSGMTRIKVY  118
            +     +     +     D+TERMNA A   ++ ++E  L GFI  AKSPS GM R+++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLY  118

Query  119  NDKGAPAER-GVGLFARAFMDRFPLIPVEDEGRLHDDKLRENFIERIFAMQRFRDAVAGD  177
            ++KG  + + G GLF+ A MD++P +P+E++GRLHD  LRENFI RIFA++ + +A+ ++
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHEL-NALRAQ  177

Query  178  GRSTLVSRLIAFTAGHKLLFMAHSPELARQIGRLTAEASKWPA-DGLVHAYETLLMKTLA  236
            G S     L+AF +  KL ++AH     R+IG + A    W   D++   Y   LM  L 
Sbjct  178  GLSR--HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILR  235

Query  237  LPATPAKHANVLQHAMGYFKKVLTTYEKAELNEVIANYRLGLTPLIVPVTLIAHFTRKYD  296
             PA+  +H+NVL H  GYF + L + ++AEL EVI  YR G  P++ P+TL+ H+     
Sbjct  236  HPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHP  295

Query  297  VAYLKDQAYLAPHPIELKLR  316
              YL+ Q Y+ P P  L LR
Sbjct  296  DDYLRSQNYFEPYPDTLGLR  315

239) TOL2_C00300 in NC_018645


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  203 bits (756),  Expect = 8e-54, Method: Compositional matrix adjust.
 Identities = 125/311 (41%), Positives = 198/311 (64%), Gaps = 6/311 (1%)

Query  7    IGISSCLLGNKVRYDGGHSHDRFLTQTLGLFAKYVPVCPEVECGMPIPREAVRLVGTP--  64
            +GIS+CL G  VR+DGGH +  F+ ++L+    Y P+CPEV  G+P+PR A+RL+ T   
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  65   ENPKLVTQKTRQDKTRQMKDWIPAKLKTLEQENLCGFIFRSKSPSSGLYRIRVYGDDG-K  123
            +     ++  ++D T +M+      L T+ +  L GFI  +KSPS G+ R+R+Y++ G +
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  124  VRKTGTGLFARAFTQHFPRVPVEEAGRLHDPELRENFIEAIFSLQRWRDLLKKNRTPGGL  183
             RK+GTGLF+ A  + +P++P+EE GRLHDP LRENFI  IF+L+    L  +  +  +L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  184  VDFHTRNKLLILSHNQDLYRKLGKLVAQGKTL-DMDQLFDAYEKILLNSLKLKTTVKKNI  242
            + FH+R KL +L+H+Q  YR +G +VA+     D+D +F  Y   L+  L+  ++ K++ 
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  243  NVLHHILGYFKRNLTGSEKHELLTIIDQYRSGYVPLIVPITLIRHYVMKYDQPWLKIQTY  302
            NVL HI GYF R L + ++ EL  +I  YR+G +P++ P+TL++HY+    +  L+ Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  303  LNPHPFELKLR  313
            ++P P  L LR
Sbjct  305  FEPYPDTLGLR  315

240) Pcar_2712 in NC_007498


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  203 bits (756),  Expect = 9e-54, Method: Compositional matrix adjust.
 Identities = 130/318 (41%), Positives = 203/318 (64%), Gaps = 6/318 (1%)

Query  2    EKIRIGISACLLGQNVRYDGGHQLDRFLRDTLGYFVDYVPVCPEVEMGLPIPRQTLRLVG  61
            +K  +GIS+CL G  VR+DGGH+   F+ ++L+  V Y P+CPEV +GLP+PR +LRL+ 
Sbjct  3    NKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQ  62

Query  62   DA-DSPRLVFSKSG-EDVTERMTSWAKRRLAELEKEDLCGFIFKARSPSSGMARVKLYDR  119
             + +  R+ +S +  +DVTERM + A R L+ +   +L GFI  A+SPS GM RV+LYD 
Sbjct  63   TTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDE  120

Query  120  RGVPN-KNGVGLFARLFMEYFPMLPVEEDGRLNDIRLRENFIEAIFTFRRWRDFLTEGAT  178
            +G    K G GLF+   M+ +P LP+EEDGRL+D  LRENFI  IF+++    + ++G +
Sbjct  121  KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLS  180

Query  179  PEKLVAFHARHKLLLMSHSVELARQMGRLVGRAGE-VPAEEILRDYKQLLMQAVRTLTTP  237
             + L+AFH+R KL L++H     R++G +V+R  E    + ++  Y++ LM  +R  ++ 
Sbjct  181  RHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR  240

Query  238  AKHSNVLQHALGYFKRQLSHDEKQEMLQLIDQYRHGTVPLAVPLALLNHYVRKYQPPWLD  297
             +H+NVL H  GYF R L+  ++ E+ ++I  YR G +P+  PL+LL+HY+       L 
Sbjct  241  KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLR  300

Query  298  EQVYLHPHPMELHLRSGV  315
             Q Y++P P  L LR ++
Sbjct  301  SQNYFEPYPDTLGLRLAI  318

241) Dde_3214 in NC_007519


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  202 bits (752),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 132/324 (41%), Positives = 196/324 (61%), Gaps = 12/324 (3%)

Query  1    MTERIRIGISSCLLGNKVRHDGGHKFDSYIVNVLGRYLDFVPVCPEVECGLPTPREPMRL  60
            M ++  +GIS+CL G  VR DGGHK   +++N L+  + + P+CPEV  GLP PR ++RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   AGDVHSPRLM--TSKTWQDKTEQMQTWADSKVRELEGQGLCGFIFKRGSPSSGMERVKVY  118
                 +   M  +    +D TE+M++ AD  +  +    L GFI    SPS GMERV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLY  118

Query  119  PFTDPREVKNVGAPVLKGSGLFARTFMEHFPLLPVEEEGRLNDPVLRENFIERLFVVRRW  178
               + R  K        G+GLF+ + M+ +P LP+EE+GRL+DPVLRENFI R+F ++  
Sbjct  119  DEKGNRGRKA-------GTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHEL  171

Query  179  YDLLESGMAPGAVVEFHTRHKLLLLAHSTQKYREMGRLVAAVREYSP-EQFRTEYRRLLM  237
              L   G++  +++ FH+R KL LLAH    YRE+G +VA ++E    + F   YR  LM
Sbjct  172  NALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLM  231

Query  238  EALSVRATAGRHANVQQHIMGYFRRQLTTDEKQELVEIIDRYRNGLVPLIVPVTMLNHYV  297
              L   A+   H+NV  HI GYF+R L + ++ EL E+I  YR G +P++ P+T+L+HY+
Sbjct  232  AILRHPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYL  291

Query  298  RKYGDEYLAGQYYLNPHPVELKLR  321
                D+YL +Q Y++P P  L LR
Sbjct  292  AEHPDDYLRSQNYFEPYPDTLGLR  315

242) AnaeK_3126 in NC_011145


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  198 bits (737),  Expect = 3e-52, Method: Compositional matrix adjust.
 Identities = 130/311 (42%), Positives = 196/311 (64%), Gaps = 5/311 (1%)

Query  8    LGVSSCLLGQEVRYDGQHKRDDFLTEVLGPFVEWVPVCPELELGLGVPREPIRLVGRPAA  67
            +G+S+CL G  VR+DG HKR DF+ + L+P V   P+CPE+ +GL VPR ++RL+    +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   PALV--AERSGLDHTEAMRAFAERRVAALAREDLSGYVTKKDSPSCGMERVRVHPAKGGP  125
               +  ++ +  D TE M AFA+R +++++  +L+G++    SPSCGMERVR+   KG  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  126  PRREGVGAFARVLMEAFPLLPVEEEGRLHDPALREGFVERVFAYARWKEAVAAGMTRGAL  185
             R+ G G F+  +M+ +P LP+EE+GRLHDP LRE F+ R+FA    +   A G++R +L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  186  VAFHTAHKLTLLAHSPaayralgarvgglrrgairaD-VEAYGAGLMAALKVPATRGRHV  244
            +AFH+  KL LLAH  A+YR +G+ V+ L+           Y   LMA L+ PA+R  H 
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  245  NVLQHAAGYLRDRLPAADRKELEESIADFGRGLVPRIVPLTLLRHHVRAQGLEYLAGQVY  304
            NVL H  GY++  L + +R EL E I ++  G +P + PLTLL+H +  +  +YL +Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  305  LDPDPKELMLR  315
            ++P P  L LR
Sbjct  305  FEPYPDTLGLR  315

243) Hhal_0260 in NC_008789


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  197 bits (730),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 127/299 (43%), Positives = 198/299 (67%), Gaps = 1/299 (0%)

Query  16   VGVSSCLLGEEVRYDGSHKRNPFVTEALSRYFRYVPVCPEVAIGLPTPRPPIRLELdadn  75
            VG+S+CL G  VR+DG+HKR  FV ++L+    Y P+CPEVAIGLP PRP++RL   +  
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  76   rvrvrgvrdrqtdvTEAMEAFGREKGRELHWLSGYILKAKSPSCGMERVKVYKPDGHPAG  135
             +R+R  +  + DVTE M+AF+      +  L+G+I+ AKSPSCGMERV++Y   G+ + 
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGR  126

Query  136  IPGRGAYARTLMEANPLLPVEEEGRLNDPSLREGFVCRVFCYYRWQRLVEAGLTPKALVD  195
             +G G ++ ++M+  P LP+EE+GRL+DP LRE F+ R+F     + L   GL+  +L+ 
Sbjct  127  KAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSLLA  186

Query  196  FHAEHKLLLMAHDDQRMRELGRLVSTLGER-SLEAVADEYIHGFMAALARPATRGRHANV  254
            FH+  KL L+AH++   RE+G +V+ L E+  L+A    Y + +MA L +PA+R  H+NV
Sbjct  187  FHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHTNV  246

Query  255  LYHLLGYLKRELDPADKQEVVSVIEQYRTGMVPLIVPVMLLRHHFRHWPDPYVERQFYL  313
            L H+ GY+ R L++ ++ E+  VI  YR+G +P++ P+ LL+H + + PD Y+  Q Y+
Sbjct  247  LMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYF  305

244) PADK2_24745 in NC_018080


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 207/316 (66%), Gaps = 7/316 (2%)

Query  9    TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  67
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  68   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYpegg  123
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  124  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVYAHAHWQALRQRGLSHS  183
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R++A  + +ALR +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  184  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  242
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  243  HGNVLLHLSGYLKRDLATEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  302
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  303  AYLQPHPTELGLRNAL  318
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

245) PLES_50441 in NC_011770


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 207/316 (66%), Gaps = 7/316 (2%)

Query  9    TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  67
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  68   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYpegg  123
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  124  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVYAHAHWQALRQRGLSHS  183
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R++A  + +ALR +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  184  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  242
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  243  HGNVLLHLSGYLKRDLATEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  302
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  303  AYLQPHPTELGLRNAL  318
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

246) PAM18_4755 in NC_017548


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 207/316 (66%), Gaps = 7/316 (2%)

Query  9    TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  67
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  68   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYpegg  123
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  124  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVYAHAHWQALRQRGLSHS  183
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R++A  + +ALR +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  184  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  242
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  243  HGNVLLHLSGYLKRDLATEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  302
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  303  AYLQPHPTELGLRNAL  318
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

247) PA4658 in NC_002516


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 207/316 (66%), Gaps = 7/316 (2%)

Query  9    TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  67
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  68   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYpegg  123
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  124  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVYAHAHWQALRQRGLSHS  183
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R++A  + +ALR +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  184  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  242
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  243  HGNVLLHLSGYLKRDLATEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  302
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  303  AYLQPHPTELGLRNAL  318
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

248) M062_24530 in NC_021577


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 207/316 (66%), Gaps = 7/316 (2%)

Query  9    TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  67
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  68   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYpegg  123
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  124  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVYAHAHWQALRQRGLSHS  183
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R++A  + +ALR +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  184  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  242
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  243  HGNVLLHLSGYLKRDLATEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  302
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  303  AYLQPHPTELGLRNAL  318
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

249) PSPA7_5307 in NC_009656


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (727),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 208/316 (66%), Gaps = 7/316 (2%)

Query  6    LSLTPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFISFCPEQAIGLATPRPAIRL  64
            ++  P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL+ PRPA+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  65   EGTPEAAEARSRDGLA----VGGALAEYARRVTQRTDTLDGFIFMQRSPSCGLQRVKVYp  120
              T   ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y 
Sbjct  61   IQTT-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYD  119

Query  121  egggapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVFAHAHWQALRQRGL  180
            E G   R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R+FA  + +ALR +GL
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  181  SHAAIVAFHSRYKYQLLAHSPEHYRSLGRLLGE-AGHHPPEALGRRYFGALMQGLRRCAT  239
            S+ +++AFHSRYK QLLAH    YR +G +++     +  +A+  RY   LM  LR+ A+
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  240  RGSHGNVLLHLSGYLKRSLAADDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPQAYI  299
            R +H NVL+H+ GY+ R+L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  300  AQQAYLQPHPAELGLR  315
              Q Y++P P  LGLR
Sbjct  300  RSQNYFEPYPDTLGLR  315

250) A2cp1_3227 in NC_011891


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (726),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 129/311 (42%), Positives = 195/311 (63%), Gaps = 5/311 (1%)

Query  8    LGVSSCLLGQEVRYDGQHKRDDFLTEVLGPFVQWVPVCPELELGLGVPREPIRLVGRSAA  67
            +G+S+CL G  VR+DG HKR DF+ + L+P V   P+CPE+ +GL VPR ++RL+  + +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   PSLV--AERSGLDHTEAMRAFAERRVGELAREDLSGYVTKKDSPSCGMERVRVHPAKGGP  125
               +  ++ +  D TE M AFA+R +  ++  +L+G++    SPSCGMERVR+   KG  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  126  PRRDGVGAFARVLIEAFPLLPVEEEGRLHDPALREGFVERVFAYARWKEAVAAGMTRGAL  185
             R+ G G F+  +++ +P LP+EE+GRLHDP LRE F+ R+FA    +   A G++R +L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  186  VAFHTAHKLTLLAHSPaayralgarvgglrrgairaD-VEAYGAGLMAALKVPATRGRHV  244
            +AFH+  KL LLAH  A+YR +G+ V+ L+           Y   LMA L+ PA+R  H 
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  245  NVLQHAAGYLRDRLPAADRKELEESIADFGRGLVPRIVPLTLLRHHVRAQGLEYLAGQVY  304
            NVL H  GY++  L + +R EL E I ++  G +P + PLTLL+H +  +  +YL +Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  305  LDPDPKELMLR  315
            ++P P  L LR
Sbjct  305  FEPYPDTLGLR  315

251) DGI_2487 in NC_022444


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  196 bits (727),  Expect = 2e-51, Method: Compositional matrix adjust.
 Identities = 126/314 (41%), Positives = 200/314 (64%), Gaps = 12/314 (3%)

Query  23   VGVSTCLLGEPVRYDGGHKHDRYLTDVLGRFVRFVPVCPEVECGLGVPREAMRLVGDP-A  81
            VG+S CL G  VR+DGGHK+  ++ + L+  V + P+CPEV  GL VPR A+RL+    +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  82   APRL-VTQKTNLDHTERMQAWAA---GRVEELAGLDLCGFVFKSKSPSSGMERVKVYGEN  137
              R+  ++  + D TERM+A A      + ELAG+ +C+     KSPS GMERV++Y+E+
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCA-----KSPSCGMERVRLYDEK  121

Query  138  GHPVNK-GVGLFARAFMERFPLLPVEEEGRLNDVHLRENFIERLFLYKRWQDTVQRQRTM  196
            G+   K G GLF+ A M+++P LP+EE+GRL+D  LRENFI R+F     +    +  + 
Sbjct  122  GNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSR  181

Query  197  ASLMEFHTRHKLLLMSHSQEKLRALGKIVSDIGN-ADVEAAIAAYFPLMMDAVAQHATVK  255
             SL+ FH+R KL L++H Q   R +G +V+ + +  D++A +  Y   +M  + + A+ K
Sbjct  182  HSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRK  241

Query  256  KQRNVLLHVMGYFKKHLDADEKQELLEVVDRYAAGLAPLIVPVTLLNHYVRKYRQPYLQA  315
            ++ NVL+H+ GYF + L++ ++ EL EV+  Y AG  P++ P+TLL+HY+    + YL++
Sbjct  242  NHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRS  301

Query  316  QWWLQPHPVELALR  329
            Q  ++P P  L+LR
Sbjct  302  QNYFEPYPDTLGLR  315

252) G655_24570 in NC_020912


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  195 bits (724),  Expect = 3e-51, Method: Compositional matrix adjust.
 Identities = 146/316 (47%), Positives = 207/316 (66%), Gaps = 7/316 (2%)

Query  10   TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  68
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  69   PEAAEARSRDGLA----VGEALAEYARRVAQRADALDGFIFMQRSPSCGLQRVKVYpegg  124
               ++ R R + A    V E +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  125  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVFAHAHWQALCQRGLSHS  184
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R+FA  + +AL  +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  185  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  243
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  244  HGNVLLHLSGYLKRDLAAEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  303
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  304  AYLQPHPTELGLRNAL  319
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

253) KN400_3181 in NC_017454


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  194 bits (722),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 127/311 (41%), Positives = 196/311 (64%), Gaps = 7/311 (2%)

Query  7    IGVSSCLLGEKVRYDGGHKHDRYITDTLGRFFEFVSVCPEAECGMPIPREAMRL-EADGG  65
            +G+S+CL G  VR+DGGHK+  ++ ++L+    + ++CPE   G+P+PR A+RL ++  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  66   EVRLVTSRSRVDK-TEQMLDFCRRKVLELESEDLCGFIFKKDSPSSGLFNVKLY--RRGM  122
            ++R+  S++  D  TE+M  F  R +  +   +L GFI    SPS G+  V+LY  +   
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  123  PTKAGRGLFADAVTKHFPLLPVEEEGRLHDMGLREHFIERVFAFRRWKDLLLGGKSLGRL  182
              KAG GLF+ A+   +P LP+EE+GRLHD  LRE+FI R+FA++  + L   G S   L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  183  VAFHADHKLLIMAHSPEVYREMGALVARGKELGC-DDLFACYQELFMKALSLHATVRKNT  241
            +AFH+  KL ++AH    YRE+G++VAR  E +  D +F  Y+E +M  L   A+ +++T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  242  NVLQHIAGYFKKQLTREEKAELQEVIGEYHRHLVPLIVPVTLLRHYVKKYGQEYLLKQVY  301
            NVL HI GYF + L   ++AEL+EVI  Y+   +P++ P+TLL+HY+    ++YL  Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  302  LSPTPLELMLR  312
            + P P  L LR
Sbjct  305  FEPYPDTLGLR  315

254) GSU3251 in NC_002939


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  194 bits (722),  Expect = 4e-51, Method: Compositional matrix adjust.
 Identities = 127/311 (41%), Positives = 196/311 (64%), Gaps = 7/311 (2%)

Query  7    IGVSSCLLGEKVRYDGGHKHDRYITDTLGRFFEFVSVCPEAECGMPIPREAMRL-EADGG  65
            +G+S+CL G  VR+DGGHK+  ++ ++L+    + ++CPE   G+P+PR A+RL ++  G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  66   EVRLVTSRSRVDK-TEQMLDFCRRKVLELESEDLCGFIFKKDSPSSGLFNVKLY--RRGM  122
            ++R+  S++  D  TE+M  F  R +  +   +L GFI    SPS G+  V+LY  +   
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  123  PTKAGRGLFADAVTKHFPLLPVEEEGRLHDMGLREHFIERVFAFRRWKDLLLGGKSLGRL  182
              KAG GLF+ A+   +P LP+EE+GRLHD  LRE+FI R+FA++  + L   G S   L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  183  VAFHADHKLLIMAHSPEVYREMGALVARGKELGC-DDLFACYQELFMKALSLHATVRKNT  241
            +AFH+  KL ++AH    YRE+G++VAR  E +  D +F  Y+E +M  L   A+ +++T
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  242  NVLQHIAGYFKKQLTREEKAELQEVIGEYHRHLVPLIVPVTLLRHYVKKYGQEYLLKQVY  301
            NVL HI GYF + L   ++AEL+EVI  Y+   +P++ P+TLL+HY+    ++YL  Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  302  LSPTPLELMLR  312
            + P P  L LR
Sbjct  305  FEPYPDTLGLR  315

255) PA14_61610 in NC_008463


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  193 bits (716),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 146/316 (47%), Positives = 206/316 (66%), Gaps = 7/316 (2%)

Query  10   TPRLGISACLLGKPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  68
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  69   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKLYpegg  124
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV+LY E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  125  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVFAHAHWQALCQRGLSHS  184
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R+FA  + +AL  +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  185  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  243
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  244  HGNVLLHLSGYLKRDLVAEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  303
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  304  TYLQPHPTELGLRNAL  319
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

256) DvMF_1786 in NC_011769


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  193 bits (715),  Expect = 2e-50, Method: Compositional matrix adjust.
 Identities = 133/329 (41%), Positives = 202/329 (62%), Gaps = 18/329 (5%)

Query  7    DDRLRVGISSCLMGNKVRFDGGHKHDPYITGTLGQYMDFVPVCPEVECGMPIPREALRLV  66
            +++  VGIS+CL G  VRFDGGHK+  ++  +L+  + + P+CPEV  G+P+PR ALRL+
Sbjct  2    NNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  67   GDP-ANPRL-VTVKGYEDWTERMRAFALRRVEQLAAERLDGFIFKRASPSSGMERVKVYA  124
                ++ R+  +    +D TERM AFA R +  ++   L GFI    SPS GMERV++Y 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYD  119

Query  125  DHDPRDVPEGAGRVNLGPPQEKGVGIFARVFMDRFPLLPTEEEGRLNDPRLRENFIERLF  184
            + + R+             +  G G+F+   MD++P LP EE+GRL+DP LRENFI R+F
Sbjct  120  EKGNRG-------------RKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIF  166

Query  185  VMRRWRALAEAGMSRGGLVDFHTRHKLLLMSHSVEHYRALGRLVAHAASHEQ-ASLARDY  243
             ++   AL   G+SR +L+ FH+R KL L++H    YR +G +VA+    ++  ++   Y
Sbjct  167  ALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRY  226

Query  244  LTGLMDGLRLPATTAKHANVLQHCMGYFKRVLTPDEKMEMLEVIQRYRKlqvplvvpvtl  303
               LM  LR PA+  +H+NVL H  GYF R L + ++ E+ EVI  YR  ++P++ P+TL
Sbjct  227  REKLMAILRHPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTL  286

Query  304  lNHYVRKYGEAYLAGQFYLNPHPVELKLR  332
            L+HY+    + YL +Q Y++P P  L LR
Sbjct  287  LKHYLAEHPDDYLRSQNYFEPYPDTLGLR  315

257) NCGM2_0929 in NC_017549


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  193 bits (718),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 145/316 (46%), Positives = 206/316 (66%), Gaps = 7/316 (2%)

Query  10   TPRLGISACLLGEPVRFNGGHKRSALC-EELARHVEFVSFCPEQAIGLGTPRPAIRLEGT  68
             P +GIS+CL G  VRF+GGHKR  +  + LA  V + ++CPE AIGL  PRPA+RL  T
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  69   PEAAEARSRDGLA----VGGALAEYARRVAQRADTLDGFIFMQRSPSCGLQRVKVYpegg  124
               ++ R R + A    V   +  +A R     + L GFI   +SPSCG++RV++Y E G
Sbjct  64   T-CGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  125  gapraegrgrfaaalcealpelpveeeGRLHDPVLRENFLTRVFAHAHWQALCQRGLSHS  184
               R  G G F+AA+ +  P LP+EE+GRLHDPVLRENF++R+FA  + +AL  +GLS+ 
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  185  AIVAFHSRYKYQLLAHSPEHYRSLGRLLGEAGHYQP-EALGTRYFGELMQGLRRCATRGS  243
            +++AFHSRYK QLLAH    YR +G +++   + +  +A+  RY   LM  LR+ A+R +
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  244  HGNVLLHLSGYLKRDLAAEDRRELRELIEQYRHGSVPLVVPLTLLKHHFRRHPHAYIAQQ  303
            H NVL+H+ GY+ R L + +R ELRE+I  YR G +P++ PLTLLKH +  HP+ Y+  Q
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQ  302

Query  304  AYLQPHPTELGLRNAL  319
             Y++P P  LGLR A+
Sbjct  303  NYFEPYPDTLGLRLAI  318

258) Anae109_3008 in NC_009675


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  187 bits (693),  Expect = 8e-49, Method: Compositional matrix adjust.
 Identities = 127/311 (41%), Positives = 196/311 (64%), Gaps = 5/311 (1%)

Query  8    LGVSSCLLGRNVRYDGQHKRDPFLVEVLGDFVEWVPVCPELEVGMGVPREPIRLVGPSRS  67
            +G+S+CL G  VR+DG HKR  F+++ L+  V   P+CPE+ +G+ VPR ++RL+  + +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  68   P-RLVAERSGADH-TEAMRRYAEARVAELEGLELSGYVTKKDSPSCGMARVRVYPQKGGP  125
              R+   ++  D+ TE M  +A+  ++ +   EL+G++    SPSCGM RVR+Y +KG  
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKGNR  124

Query  126  PRRDGVGAFARVLLEAMPLLPVEEEGRLADPALRESFIERIFAYARWKAAVAAGMRRGDL  185
             R+ G G F+  +++  P LP+EE+GRL DP LRE+FI RIFA    +A  A G+ R  L
Sbjct  125  GRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHSL  184

Query  186  VafhaahklallahSPSAYRRLGALVASMKK-GSIAPVVDAYGRGFMEALRVPATRGRHT  244
            +AFH+  KL LLAH  ++YR +G++VA +   + + +    Y   +M  LR PA+R  HT
Sbjct  185  LAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNHT  244

Query  245  NVLQHMLGYFRDALPRDDRKELEEVVRDYGRGLVPLVVPQTLFRHHVRREGVAYLAAQTY  304
            NVL H+ GYF+ AL   +R EL EV+ +Y  G +P++ P TL++H +  +   YL +Q Y
Sbjct  245  NVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNY  304

Query  305  LDPDPKELMLR  315
            ++P P  L LR
Sbjct  305  FEPYPDTLGLR  315

259) Dbac_2060 in NC_013173


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  185 bits (687),  Expect = 2e-48, Method: Compositional matrix adjust.
 Identities = 134/317 (43%), Positives = 199/317 (63%), Gaps = 9/317 (2%)

Query  2    NRPIRLGVSRCLLGDKVRYDGGHKHDPFLTKTLGeyveyvpvcpevecGLPIPREALRLV  61
            N+P+ +G+S CL G  VR+DGGHK+  F+ ++L+  V Y P+CPEV  GLP+PR ALRL+
Sbjct  3    NKPV-VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLI  61

Query  62   GDP-DSPRL-LTQKTRVDHTKRMQDWAAGRLAELENENLCGFIFKSKSPSSGMERVKVYS  119
                +  R+  ++  + D T RM+  A   L+ + +  L GFI  +KSPS GMERV++Y 
Sbjct  62   QTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYD  119

Query  120  ESGNLA-GQSVGIFARMFMERFPLLPVEEEGRLHDVHLRENFIDRIFVLRRYRDTLKGGQ  178
            E GN +   + G+F+   M+++P LP+EE+GRLHD  LRENFI RIF L+        G 
Sbjct  120  EKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGL  179

Query  179  NLGNLITFHTRHKLQILAHSPEIYRAMGRLVASGKSMPK-EQLFKNYHEHLMTAMRMKAT  237
            +  +L++FH+R KLQ+LAH    YR +G +VA        + +F  Y+E LM+ +R  A+
Sbjct  180  SRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPAS  239

Query  238  PPKHRNVLQHIMGYFKNDLLPDEKQELLDLINQYARGVLPLIVPVTLLNHYVLKYEEFYL  297
              +H NVL HI GYF   L + ++ EL ++I  Y  G LP++ P+TLL+HY+    + YL
Sbjct  240  RKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYL  299

Query  298  QNQTYLRPHP--LELKL  312
            ++Q Y+ P P  L L+L
Sbjct  300  RSQNYFEPYPDTLGLRL  316

260) B005_1518 in NC_018524


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  182 bits (675),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 128/316 (41%), Positives = 195/316 (62%), Gaps = 3/316 (0%)

Query  6    RPVVGVSSCLLGAPVRYNGGHSRYRFLTDELDRHVNWLPVCPEAEIGLGVPRPTLRLRDS  65
            +PVVG+S+CL GA VR++GGH R  F+ + L   V   P+CPE  IGL VPRP+LRL ++
Sbjct  4    KPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQT  63

Query  66   DGSDRVVSTKDGV--DHTDDLAGVADRHLKELRRLDGYVLKNKSPSCGLLSLPVFDEKGD  123
              +D  +   ++   D T+ + + ADR L  +  L G+++  KSPSCG+  + ++DEKG+
Sbjct  64   TCGDIRMRYSHAPHDDVTERMNAFADRFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGN  123

Query  124  rrrgtgrgafaarltallpllPVEEQGRLSDPVLREHFVERVFAHSRLRSLLEGAWRPRD  183
            R R +G G F+A +    P LP+EE+GRL DPVLRE+F+ R+FA   L +L   +   + 
Sbjct  124  RGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRHS  183

Query  184  LVEFHTRHKLQLMAHSPDGYRETGRIVARAGG-GDREEIAAAYAEAFQRTLALRTTRGKH  242
            L+ FH+R KLQL+AH   GYRE G +VAR    +D + +   Y E +   L   ++R +H
Sbjct  184  LLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKNH  243

Query  243  ANVLQHIFGMVSPTLDDTRRHDLLAGIEEYREGQSPLSLPVALLRHHCLAEDLGWAGGQT  302
            +NVL HI G    +L+  +R +L   I  YR G+ P+  P++LL+H    +  +   +Q 
Sbjct  244  TNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQN  303

Query  303  YLRPYPDALRLRHPVA  318
            Y+ PYPD+L LR +++
Sbjct  304  YFEPYPDTLGLRLAIT  319

261) Gbem_3230 in NC_011146


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  180 bits (667),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 131/319 (42%), Positives = 208/319 (66%), Gaps = 10/319 (3%)

Query  1    MTSPIKIGVSSCLLGEKVRYDGGHKHDRYITDVLGRFFLFVPVCPEVECGMPVPREAMRL  60
            M +   +G+S+CL G  VR+DGGHK+  ++ + L+    + P+CPEV  G+PVPR A+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   -EGDPAAPRL-FTHKSRADKTEQMLAFCRAKVEALALEDLCGFIFKKGSPSSGLFRVKVY  118
             +   +  R+ ++H ++ D TE+M AF    + +++  +L GFI    SPS G+ RV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLY  118

Query  119  DQAGVPS-KTGSGLFAAAVARRFPHLPMEEEGRLADAFLRENFIERVFSYRRWKDFLAQG  177
            D+ G  + K+G+GLF+AA+  ++P LP+EE+GRL D+ LRENFI R+F+ +  + + AQG
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PDLGKLVQFHTRQKLLVMSHSTQLYREMGALVARGKEIAWPELAE---RYQELFLRALEL  234
                 L+ FH+R KL +++H    YRE+G++VAR  E  W +L     RY+E ++  L  
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHE--WDDLDAFFVRYREKLMAILRH  236

Query  235  QATVKKQTNVLMHIMGYFKKELGAEEKQELLELIGQYHDGlvplvvpvtllRHYVNKYRq  294
             A+ K++TNVLMHI GYF + L + ++ EL E+I  Y+ G +P++ P+TLL+HY+    +
Sbjct  237  PASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPD  296

Query  295  qylqqqvylSPHPAELMLR  313
            +YL+ Q Y+ P P  L LR
Sbjct  297  DYLRSQNYFEPYPDTLGLR  315

262) GM21_1034 in NC_012918


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  175 bits (648),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 128/319 (41%), Positives = 207/319 (65%), Gaps = 10/319 (3%)

Query  1    MTSPIKIGVSSCLLGEKVRYDGGHKHDRYITDVLGRFFLFVPVCPELECGMPVPREAMRL  60
            M +   +G+S+CL G  VR+DGGHK+  ++ + L+    + P+CPE+  G+PVPR A+RL
Sbjct  1    MNNKPVVGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRL  60

Query  61   -EGDPAAPRL-ITHKSRADKTEQMLAFCRAKVEALALEDLCGFIFKKGSPSSGLFRVKVY  118
             +   +  R+  +H ++ D TE+M AF    + +++  +L GFI    SPS G+ RV++Y
Sbjct  61   IQTTCGDIRMRYSHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLY  118

Query  119  DHAGVPS-KTGSGLFAASVARRFPHLPMEEEGRLVDASLRENFIERVFSYRRWKDFLADG  177
            D+ G  + K+G+GLF+A++  ++P LP+EE+GRL D+ LRENFI R+F+ +  + + A+G
Sbjct  119  DEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQG  178

Query  178  PDLGKLVQFHTRQKLLVMSHSTQLYREMGALVAHGKESAWPELAE---RYQELFLRALEL  234
                 L+ FH+R KL +++H    YRE+G++VA+  E  W +L     RY+E ++  L  
Sbjct  179  LSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHE--WDDLDAFFVRYREKLMAILRH  236

Query  235  QATVKKQTNVLMHIMGYFkkelggeekqelleligqYHDGlvplvvpvtllKHYVNKYRQ  294
             A+ K++TNVLMHI GYF + L + ++ EL E+I  Y+ G +P++ P+TLLKHY+    +
Sbjct  237  PASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPD  296

Query  295  EYLQQQVYLSPHPAELMLR  313
            +YL+ Q Y+ P P  L LR
Sbjct  297  DYLRSQNYFEPYPDTLGLR  315

263) Dvul_0395 in NC_008751


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  172 bits (635),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 130/320 (41%), Positives = 196/320 (62%), Gaps = 16/320 (5%)

Query  53   IGISSCLLGNPVRFDGGHKFDPWVVNVLGAYLDFVPVCPEVECGMGIPREALRLVGDPSA  112
            +GIS+CL G  VRFDGGHK    V+N L++ + + P+CPEV  G+ +PR ALRL+    +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  113  PRLVTVKHG--EDWTDRMRAWAERRVAELEGEGLCGYIFKRASPSSGMERVKVYPEFDPA  170
               +   H+  +D T+RM A A+R ++ +    L G+I    SPS GMERV++Y E    
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYDE----  120

Query  171  TGKSGGVPVQKGVGMFARAFIERFPLLPVEEEGRLNDPDLRENFIERLFVMRRWRQlldd  230
                G    + G G+F+ A ++++P LP+EE+GRL+DP LRENFI R+F ++    L  +
Sbjct  121  ---KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  231  gldtgglVAFHTRHKLLMLAHSPQHYRTMGKLVAQAATYPRDELREAYQRL---LMEGLR  287
            GL   +L+AFH+R KL +LAH    YR +G +VA+     +D+L   + R    LM  LR
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHE--WDDLDAFFVRYREKLMAILR  235

Query  288  LRATPAKHVNVLQHIMGYFRKQLTPDEKQEMLEQIDLYRRAlvplvvpvtllNHYVRKYG  347
              A+  +H NVL HI GYF++ L + ++ E+ E I  YR + +P++ P+TLL+HY+    
Sbjct  236  HPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHP  295

Query  348  EKYLAGQFYLNPHPVELKLR  367
            + YL +Q Y++P P  L LR
Sbjct  296  DDYLRSQNYFEPYPDTLGLR  315

264) DVU2976 in NC_002937


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  172 bits (635),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 130/320 (41%), Positives = 196/320 (62%), Gaps = 16/320 (5%)

Query  53   IGISSCLLGNPVRFDGGHKFDPWVVNVLGAYLDFVPVCPEVECGMGIPREALRLVGDPSA  112
            +GIS+CL G  VRFDGGHK    V+N L++ + + P+CPEV  G+ +PR ALRL+    +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  113  PRLVTVKHG--EDWTDRMRAWAERRVAELEGEGLCGYIFKRASPSSGMERVKVYPEFDPA  170
               +   H+  +D T+RM A A+R ++ +    L G+I    SPS GMERV++Y E    
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYDE----  120

Query  171  TGKSGGVPVQKGVGMFARAFIERFPLLPVEEEGRLNDPDLRENFIERLFVMRRWRQlldd  230
                G    + G G+F+ A ++++P LP+EE+GRL+DP LRENFI R+F ++    L  +
Sbjct  121  ---KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  231  gldtgglVAFHTRHKLLMLAHSPQHYRTMGKLVAQAATYPRDELREAYQRL---LMEGLR  287
            GL   +L+AFH+R KL +LAH    YR +G +VA+     +D+L   + R    LM  LR
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHE--WDDLDAFFVRYREKLMAILR  235

Query  288  LRATPAKHVNVLQHIMGYFRKQLTPDEKQEMLEQIDLYRRAlvplvvpvtllNHYVRKYG  347
              A+  +H NVL HI GYF++ L + ++ E+ E I  YR + +P++ P+TLL+HY+    
Sbjct  236  HPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHP  295

Query  348  EKYLAGQFYLNPHPVELKLR  367
            + YL +Q Y++P P  L LR
Sbjct  296  DDYLRSQNYFEPYPDTLGLR  315

265) Deval_2749 in NC_017310


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  172 bits (635),  Expect = 4e-44, Method: Compositional matrix adjust.
 Identities = 130/320 (41%), Positives = 196/320 (62%), Gaps = 16/320 (5%)

Query  53   IGISSCLLGNPVRFDGGHKFDPWVVNVLGAYLDFVPVCPEVECGMGIPREALRLVGDPSA  112
            +GIS+CL G  VRFDGGHK    V+N L++ + + P+CPEV  G+ +PR ALRL+    +
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  113  PRLVTVKHG--EDWTDRMRAWAERRVAELEGEGLCGYIFKRASPSSGMERVKVYPEFDPA  170
               +   H+  +D T+RM A A+R ++ +    L G+I    SPS GMERV++Y E    
Sbjct  67   DIRMRYSHAPHDDVTERMNAFADRFLPTIGE--LAGFIVCAKSPSCGMERVRLYDE----  120

Query  171  TGKSGGVPVQKGVGMFARAFIERFPLLPVEEEGRLNDPDLRENFIERLFVMRRWRQlldd  230
                G    + G G+F+ A ++++P LP+EE+GRL+DP LRENFI R+F ++    L  +
Sbjct  121  ---KGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQ  177

Query  231  gldtgglVAFHTRHKLLMLAHSPQHYRTMGKLVAQAATYPRDELREAYQRL---LMEGLR  287
            GL   +L+AFH+R KL +LAH    YR +G +VA+     +D+L   + R    LM  LR
Sbjct  178  GLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHE--WDDLDAFFVRYREKLMAILR  235

Query  288  LRATPAKHVNVLQHIMGYFRKQLTPDEKQEMLEQIDLYRRAlvplvvpvtllNHYVRKYG  347
              A+  +H NVL HI GYF++ L + ++ E+ E I  YR + +P++ P+TLL+HY+    
Sbjct  236  HPASRKNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHP  295

Query  348  EKYLAGQFYLNPHPVELKLR  367
            + YL +Q Y++P P  L LR
Sbjct  296  DDYLRSQNYFEPYPDTLGLR  315

266) Rmar_1609 in NC_013501


> NC_003197_P2|11|G11|16764739|NP_460354.1|Salmonella_typhimurium_LT2|-|12389..13348|orf319|STM1389|inner 
membrane protein
Length=319

 Score =  170 bits (629),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 134/314 (43%), Positives = 204/314 (65%), Gaps = 11/314 (3%)

Query  10   VGISSCLLGEPVRFNGGHARDRSLIQLLGPFVEWVPMCPEVAVGMGVPREAVRLV----G  65
            VGIS+CL G  VRF+GGH R   +++ L+P V   P+CPEVA+G+ VPR A+RL+    G
Sbjct  7    VGISGCLTGATVRFDGGHKRMDFVMNSLAPWVAYKPICPEVAIGLPVPRPALRLIQTTCG  66

Query  66   DIERPRLVGSNSGRDWTDAMRTWSEAQAEQIAQMDLDGFILKSRSPTCGLFRVKVYDQNG  125
            DI R R  +  +  D T+ M + ++     I+  +L GFI+ ++SP+CG+ RV++YD++G
Sbjct  67   DI-RMRY-SHAPHDDVTERMNAFADRFLPTIG--ELAGFIVCAKSPSCGMERVRLYDEKG  122

Query  126  V-PRNEGRGlfadalarrlpllpmeeegrlrDPLLRENFVDRLFAYHRLRQLLRSRPEPA  184
               R+ G GLF+ A+  + P LP+EE+GRL+DP+LRENF+ R+FA H L  L        
Sbjct  123  NRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLRENFIARIFALHELNALRAQGLSRH  182

Query  185  DLIRFHTAHKLTLLSHSPAHLKQLGQLVARAGS-GAFPEILESYTRLFMEAMNRPATRKK  243
             L+ FH+  KL LL+H  A  +++G +VAR    + +  ++  Y   +M  + +PA+RK+
Sbjct  183  SLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASRKN  242

Query  244  HTNVLQHLAGYLHDHLSAEDRAELRSLIDDYRQGMVPLIAPLILLRHHIRRAPVHPWVKV  303
            HTNVL H+ GY+H  L++ +RAELR +I +YR G +P++APL LL+H +   P +  ++ 
Sbjct  243  HTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHP-DDYLRS  301

Query  304  QVYLEPYPKELMLR  317
            Q Y+EPYP  L LR
Sbjct  302  QNYFEPYPDTLGLR  315