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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AY597277

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PSPTO_1410
( NP_791236.1 )

exchangeable effector locus protein

NC_004578
(Pseudomonas syringae DC3000)

3e-30

2) PSPPH_1297
( YP_273556.1 )

serine-aspartate repeat-containing protein

NC_005773
(Pseudomonas syringae 1448A)

1e-21

• Sequence Alignments

1) PSPTO_1410 in NC_004578


> AY597277|12|G12|51102983|AAT96130.1|Pseudomonas_viridiflava_LP23.1a|-|11318..11737|-|-|Pspto1410-like 
protein
Length=139

 Score =  124 bits (454),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 107/139 (77%), Positives = 120/139 (87%), Gaps = 1/139 (0%)

Query  1    MRAYKNLTAKIGGFLLALTIIGTSLPAFAVNDCDLDNDNSTGATCGGNDKDLDNDNVTDA  60
            MR  KNL+AKIGGFLLA  I GTSLPAFA NDCDLDND+ T+ATCGGNDKDLDNDNVTDA
Sbjct  1    MRMRKNLAAKIGGFLLASLIAGTSLPAFAANDCDLDNDHITDATCGGNDKDLDNDNVTDA  60

Query  61   AFGGNDKDMDNDHHTDAAFGGNDKDLDNDHHTDAAFGGndkdldndnktdAAFGGndrdl  120
             FGGNDKDMDND+ TDA+FGG D+DLDND+ TDA+FGGNDKDLDND+ TDAAFGGND D 
Sbjct  61   RFGGNDKDMDNDNKTDASFGGTDRDLDNDNSTDASFGGNDKDLDNDHSTDAAFGGNDTDQ  120

Query  121  dndnntdn-ynGTPSAAKK  138
            DND++TD+   G P+ AKK
Sbjct  121  DNDHSTDKYNVGVPPHAKK  139

2) PSPPH_1297 in NC_005773


> AY597277|12|G12|51102983|AAT96130.1|Pseudomonas_viridiflava_LP23.1a|-|11318..11737|-|-|Pspto1410-like 
protein
Length=139

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 74/98 (76%), Positives = 86/98 (88%), Gaps = 0/98 (0%)

Query  1   MRVYNALTAKIgglllvltmvgtslPAYAVNDCDMDNDNSTDARCGGNDKDLDNDNVTDA  60
           MR+ + L+AKIGG+LL   + GTSLPA+A NDCD+DND+ TDA CGGNDKDLDNDNVTDA
Sbjct  1   MRMRKNLAAKIGGFLLASLIAGTSLPAFAANDCDLDNDHITDATCGGNDKDLDNDNVTDA  60

Query  61  AFGGNDKDMDNDHHTDAAFGGTDKDLDNDNHTDAAFGG  98
            FGGNDKDMDND+ TDA+FGGTD+DLDNDN TDA+FGG
Sbjct  61  RFGGNDKDMDNDNKTDASFGGTDRDLDNDNSTDASFGG  98


 Score = 45.8 bits (154),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 36/51 (71%), Positives = 42/51 (83%), Gaps = 0/51 (0%)

Query  26   PAYAVNDCDMDNDNSTDARCGGNDKDLDNDNVTDAAFGGNDKDMDNDHHTD  76
            ++++  D D+DNDNSTDA  GGNDKDLDND+ TDAAFGGND D DNDH TD
Sbjct  77   ASFGGTDRDLDNDNSTDASFGGNDKDLDNDHSTDAAFGGNDTDQDNDHSTD  127