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Homologs of HH0244 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0244
( NP_859775.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

6e-154

100

2) HCBAA847_1594
( YP_007601455.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

5e-54

3) HCN_1422
( YP_006638949.1 )

type VI secretion protein VC_A0111 family

NC_017761
(Helicobacter cinaedi PAGU611)

5e-54

• Sequence Alignments

1) HH0244 in NC_004917


> NC_004917_P1|12|G12|32265743|NP_859775.1|Helicobacter_hepaticus_ATCC_51449|-|11932..12927|-|HH0244|hypothetical 
protein
Length=331

 Score =  536 bits (2024),  Expect = 6e-154, Method: Compositional matrix adjust.
 Identities = 331/331 (100%), Positives = 331/331 (100%), Gaps = 0/331 (0%)

Query  1    MNFTFYRLIKMLLVSLNREQIFLRSARSLGHAYKEVDILQYHGMADLESKDMLPLEASSV  60
            MNFTFYRLIKMLLVSLNREQIFLRSARSLGHAYKEVDILQYHGMADLESKDMLPLEASSV
Sbjct  1    MNFTFYRLIKMLLVSLNREQIFLRSARSLGHAYKEVDILQYHGMADLESKDMLPLEASSV  60

Query  61   KAMEKLPQNISSKMHTESFVEVFSYFFGLLGQSSPLPYYMLDNFAKNEDDGEGFSLFFDF  120
            KAMEKLPQNISSKMHTESFVEVFSYFFGLLGQSSPLPYYMLDNFAKNEDDGEGFSLFFDF
Sbjct  61   KAMEKLPQNISSKMHTESFVEVFSYFFGLLGQSSPLPYYMLDNFAKNEDDGEGFSLFFDF  120

Query  121  FNNYLLWLFYDSISLRGYHRSFETDFSDRISFVLLKLLGFSDTTSAKAYLPFAPLILSLR  180
            FNNYLLWLFYDSISLRGYHRSFETDFSDRISFVLLKLLGFSDTTSAKAYLPFAPLILSLR
Sbjct  121  FNNYLLWLFYDSISLRGYHRSFETDFSDRISFVLLKLLGFSDTTSAKAYLPFAPLILSLR  180

Query  181  RPKAYIEKILAHNFHLHDRISIVENIPQAIRINKNQQNSLGFKNVTLGKSFLLGSTIYSY  240
            RPKAYIEKILAHNFHLHDRISIVENIPQAIRINKNQQNSLGFKNVTLGKSFLLGSTIYSY
Sbjct  181  RPKAYIEKILAHNFHLHDRISIVENIPQAIRINKNQQNSLGFKNVTLGKSFLLGSTIYSY  240

Query  241  QNKILLRIKDLHYQEALDYFPHHKQHNKLRESVIFLTNNEFAIDVRLDMQYNPKMDFRLG  300
            QNKILLRIKDLHYQEALDYFPHHKQHNKLRESVIFLTNNEFAIDVRLDMQYNPKMDFRLG
Sbjct  241  QNKILLRIKDLHYQEALDYFPHHKQHNKLRESVIFLTNNEFAIDVRLDMQYNPKMDFRLG  300

Query  301  DIARATLGFGLLLNKKKANFAQCSMLMTLCE  331
            DIARATLGFGLLLNKKKANFAQCSMLMTLCE
Sbjct  301  DIARATLGFGLLLNKKKANFAQCSMLMTLCE  331

2) HCBAA847_1594 in NC_020555


> NC_004917_P1|12|G12|32265743|NP_859775.1|Helicobacter_hepaticus_ATCC_51449|-|11932..12927|-|HH0244|hypothetical 
protein
Length=331

 Score =  204 bits (758),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 221/325 (68%), Gaps = 34/325 (10%)

Query  7    FTFHkllykllkkyDKRDIFLRTNKSLKHPHKEIEYIE-------ENKEFL---------  50
            FTF +L+  LL   ++ +IFLR+ +SL H+ KE++ ++       E+K+ L         
Sbjct  3    FTFYRLIKMLLVSLNREQIFLRSARSLGHAYKEVDILQYHGMADLESKDMLPLEASSVKA  62

Query  51   -----------------IEIMVNFMGLQGNTSQLPSYMLDKLSRNEDGGSGWTLFFDFFN  93
                             +E+   F GL G++S LP YMLD++++NED+G G +LFFDFFN
Sbjct  63   MEKLPQNISSKMHTESFVEVFSYFFGLLGQSSPLPYYMLDNFAKNEDDGEGFSLFFDFFN  122

Query  94   HYILWLFFESANLKNYSRsfkkdfsdsiskiLFSILGINDREIAKNYLPFAPLLLSASRP  153
            +Y+LWLF++S +L+ Y RSF  DFSD IS +L+ +LG++D   AK YLPFAPL+LS  RP
Sbjct  123  NYLLWLFYDSISLRGYHRSFETDFSDRISFVLLKLLGFSDTTSAKAYLPFAPLILSLRRP  182

Query  154  KYYIEKVLQSNFNLHNKLYIIENLPHQIFIAPSQKNKLGIKNDVLGKNFILGSKFLSYQS  213
            K YIEK+L  NF+LH+++ I+EN+P+ I I  +Q+N LG+KN  LGK+F+LGS + SYQ+
Sbjct  183  KAYIEKILAHNFHLHDRISIVENIPQAIRINKNQQNSLGFKNVTLGKSFLLGSTIYSYQN  242

Query  214  KIGIYIKDIEYHRAIEYLPNQNKHEELKESILFLTNHQFCIDLYLRINHNEKMNFILGDE  273
            KI + IKD++Y+ A++Y+P++++H+ L+ES++FLTN++F ID+ L ++ N KM+F LGD 
Sbjct  243  KILLRIKDLHYQEALDYFPHHKQHNKLRESVIFLTNNEFAIDVRLDMQYNPKMDFRLGDI  302

Query  274  SVAKLSWGLALGNFKKKYHLMCIKM  298
            + A L+ GL L + K ++   C  +
Sbjct  303  ARATLGFGLLLNKKKANFA-QCSML  326

3) HCN_1422 in NC_017761


> NC_004917_P1|12|G12|32265743|NP_859775.1|Helicobacter_hepaticus_ATCC_51449|-|11932..12927|-|HH0244|hypothetical 
protein
Length=331

 Score =  204 bits (758),  Expect = 5e-54, Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 221/325 (68%), Gaps = 34/325 (10%)

Query  7    FTFHkllykllkkyDKRDIFLRTNKSLKHPHKEIEYIE-------ENKEFL---------  50
            FTF +L+  LL   ++ +IFLR+ +SL H+ KE++ ++       E+K+ L         
Sbjct  3    FTFYRLIKMLLVSLNREQIFLRSARSLGHAYKEVDILQYHGMADLESKDMLPLEASSVKA  62

Query  51   -----------------IEIMVNFMGLQGNTSQLPSYMLDKLSRNEDGGSGWTLFFDFFN  93
                             +E+   F GL G++S LP YMLD++++NED+G G +LFFDFFN
Sbjct  63   MEKLPQNISSKMHTESFVEVFSYFFGLLGQSSPLPYYMLDNFAKNEDDGEGFSLFFDFFN  122

Query  94   HYILWLFFESANLKNYSRsfkkdfsdsiskiLFSILGINDREIAKNYLPFAPLLLSASRP  153
            +Y+LWLF++S +L+ Y RSF  DFSD IS +L+ +LG++D   AK YLPFAPL+LS  RP
Sbjct  123  NYLLWLFYDSISLRGYHRSFETDFSDRISFVLLKLLGFSDTTSAKAYLPFAPLILSLRRP  182

Query  154  KYYIEKVLQSNFNLHNKLYIIENLPHQIFIAPSQKNKLGIKNDVLGKNFILGSKFLSYQS  213
            K YIEK+L  NF+LH+++ I+EN+P+ I I  +Q+N LG+KN  LGK+F+LGS + SYQ+
Sbjct  183  KAYIEKILAHNFHLHDRISIVENIPQAIRINKNQQNSLGFKNVTLGKSFLLGSTIYSYQN  242

Query  214  KIGIYIKDIEYHRAIEYLPNQNKHEELKESILFLTNHQFCIDLYLRINHNEKMNFILGDE  273
            KI + IKD++Y+ A++Y+P++++H+ L+ES++FLTN++F ID+ L ++ N KM+F LGD 
Sbjct  243  KILLRIKDLHYQEALDYFPHHKQHNKLRESVIFLTNNEFAIDVRLDMQYNPKMDFRLGDI  302

Query  274  SVAKLSWGLALGNFKKKYHLMCIKM  298
            + A L+ GL L + K ++   C  +
Sbjct  303  ARATLGFGLLLNKKKANFA-QCSML  326